BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007262
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   313   5e-83
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   301   2e-79
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   283   4e-74
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Vitis vinifera]
          Length = 492

 Score =  313 bits (801), Expect = 5e-83
 Identities = 150/284 (52%), Positives = 201/284 (70%), Gaps = 6/284 (2%)
 Frame = +1

Query: 121  AKRIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXX 300
            +KRI+Q++ +V+MLRSRG+ P I+TCN+LI  VS+ + C A Y++Y+++F          
Sbjct: 171  SKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREVFGSWDDEINEK 230

Query: 301  XXXXXXXXX------HTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAY 462
                           HTFN +MV FYR+G VE VEE+W EM   +C PN+YSYSVLMAA+
Sbjct: 231  VRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAF 290

Query: 463  CEDERMEEALRVWDEMGVKNLERDVVAYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTC 642
            C++ RM E  ++W+EM +K +E D++AYNTIIGGFC+ GE+ R EE F EME + + +TC
Sbjct: 291  CDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTC 350

Query: 643  ATYEHLICGYCKIGDVDSALLLYKGMCRKGFRPESLTIDEVIRGLCVKSRVSEALEYLRV 822
             TYEHLI GYC+IGDVDSA+LLYK MCRKGFR E+ T+D +I  LC   RV EAL+ LRV
Sbjct: 351  VTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEALKLLRV 410

Query: 823  AVKKHDIVPQGTSYEFVIKALCREGRMEDGLKLQAEMVGKGYEP 954
            A+   +  P+G SYE +IK  C EG+ME+  KLQ+EMVGKG++P
Sbjct: 411  AMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKP 454


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  301 bits (771), Expect = 2e-79
 Identities = 144/278 (51%), Positives = 194/278 (69%)
 Frame = +1

Query: 124  KRIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXXX 303
            K+ID  +++VR+LRSRG+ PLI+TCN L+  VSKC+ C+A Y +++++F           
Sbjct: 174  KKIDDGLKIVRLLRSRGISPLISTCNFLVSWVSKCKGCYAGYGVFREVFEVNDNEGKRVI 233

Query: 304  XXXXXXXXHTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAYCEDERME 483
                    HTFN +M+GFYR+G +E VEEVW EM R  C PN +SYSVLM  + +  R +
Sbjct: 234  KVRPNV--HTFNELMMGFYRDGELEMVEEVWSEMERFECVPNGFSYSVLMTVFLDVGRTK 291

Query: 484  EALRVWDEMGVKNLERDVVAYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTCATYEHLI 663
            E  ++W+EM  K ++ DVVAYNT+IGGFCK GE+ +AEE   EME N V+  C T+EHLI
Sbjct: 292  EIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNGVEANCVTFEHLI 351

Query: 664  CGYCKIGDVDSALLLYKGMCRKGFRPESLTIDEVIRGLCVKSRVSEALEYLRVAVKKHDI 843
             GYC +GDVDSA+L++K M RKGFR E   +D +I GLC K RVSEALE +R+A++    
Sbjct: 352  NGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVSEALEIMRIAMRNDGF 411

Query: 844  VPQGTSYEFVIKALCREGRMEDGLKLQAEMVGKGYEPN 957
               G SYE +IK LC++G+M++ LKLQAEMVG G+EPN
Sbjct: 412  RLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPN 449


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
            predicted protein [Populus trichocarpa]
          Length = 498

 Score =  294 bits (753), Expect = 2e-77
 Identities = 142/280 (50%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
 Frame = +1

Query: 124  KRIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXXX 303
            K+ID ++E+V+MLRS+G+ P I+TCN+LI +VS+C+     Y ++K++F           
Sbjct: 178  KKIDGSIEIVKMLRSKGISPSISTCNALISEVSRCKGSFVGYGVFKEVFGLESCELGEKM 237

Query: 304  XXXXXXXX--HTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAYCEDER 477
                      H+FN +MVGFYR G VE VEE+W EM R  C  N +SY VL+A +CE  R
Sbjct: 238  RRGFRVRPNVHSFNELMVGFYRNGEVEMVEEIWSEMERFGCVANGFSYGVLIAVFCEGGR 297

Query: 478  MEEALRVWDEMGVKNLERDVVAYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTCATYEH 657
            + EA R+WDEM VK +  DVVAYNTIIGGFCK GEV +AE  F EM  + ++++C T+EH
Sbjct: 298  LSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEH 357

Query: 658  LICGYCKIGDVDSALLLYKGMCRKGFRPESLTIDEVIRGLCVKSRVSEALEYLRVAVKKH 837
            LI GYC+IGDV+SA+L+YK M R+ FR E+LT++ +I GLC + RV EAL+ +R A++  
Sbjct: 358  LIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDV 417

Query: 838  DIVPQGTSYEFVIKALCREGRMEDGLKLQAEMVGKGYEPN 957
               P G SYE +I  LC +G+ME+ LKLQ+EMVGKG++PN
Sbjct: 418  SFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPN 457



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
 Frame = +1

Query: 127 RIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXXXX 306
           R+ +A  +   +R +G+ P +   N++I    K  +   A  +++++             
Sbjct: 297 RLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCV--- 353

Query: 307 XXXXXXXHTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAYCEDERMEE 486
                   TF  ++ G+ R G V +   V+ +M R +    + +  VL+   CE +R+ E
Sbjct: 354 --------TFEHLIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFE 405

Query: 487 ALRVWDEMGVKNLERDVV------AYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTCAT 648
           AL++     +++  RDV       +Y  +I G C+ G++  A +   EM     D   A 
Sbjct: 406 ALKI-----MRSAMRDVSFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAI 460

Query: 649 YEHLICGYCKIGDVDSALLLYKGM 720
           Y   I GY K+G+ + A +L K M
Sbjct: 461 YGAFIEGYVKLGNEEMAAMLRKEM 484


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Glycine max]
          Length = 487

 Score =  283 bits (724), Expect = 4e-74
 Identities = 141/282 (50%), Positives = 195/282 (69%), Gaps = 3/282 (1%)
 Frame = +1

Query: 121  AKRIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXX 300
            +K++D ++E+VRML SRG+ P ++T NSLI  V K +     Y +Y++ F          
Sbjct: 173  SKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRLDEENNEIS 232

Query: 301  XXXXXXXXX---HTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAYCED 471
                        HT+N +M+  Y++GLVE VE++W EM + N +PN+YSYSVLMA +C++
Sbjct: 233  KRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEM-KCNYKPNAYSYSVLMATFCDE 291

Query: 472  ERMEEALRVWDEMGVKNLERDVVAYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTCATY 651
             RM +A ++W+E+  + +E DVV+YNTIIGGFC  G+VGRAEEFF EM    V  T +TY
Sbjct: 292  GRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMAVAGVGTTASTY 351

Query: 652  EHLICGYCKIGDVDSALLLYKGMCRKGFRPESLTIDEVIRGLCVKSRVSEALEYLRVAVK 831
            EHL+ GYC IGDVDSA+L+YK M R   RP++ T+D +IR LC K RV E+LE++R AV 
Sbjct: 352  EHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVRESLEFVRCAVG 411

Query: 832  KHDIVPQGTSYEFVIKALCREGRMEDGLKLQAEMVGKGYEPN 957
            K D++P   SYE +IK LC +GRME+ LK+QAEMVGKG++PN
Sbjct: 412  KFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPN 453


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Cucumis sativus]
          Length = 499

 Score =  274 bits (701), Expect = 2e-71
 Identities = 136/281 (48%), Positives = 188/281 (66%), Gaps = 2/281 (0%)
 Frame = +1

Query: 121  AKRIDQAVEVVRMLRSRGMFPLITTCNSLIKDVSKCQDCHAAYDMYKDIFXXXXXXXXXX 300
            +K++D ++E+VRMLRSRG+ P ++T NSLI  VSKCQ  + AY +++++F          
Sbjct: 186  SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEH 245

Query: 301  XXXXXXXXX--HTFNIIMVGFYREGLVENVEEVWDEMARVNCEPNSYSYSVLMAAYCEDE 474
                       HTFN +M  FYR+G V  V+E+WD++A  N  PNSYSYS+LM   CE++
Sbjct: 246  VKLKGRVSPNVHTFNTLMDCFYRDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEK 305

Query: 475  RMEEALRVWDEMGVKNLERDVVAYNTIIGGFCKTGEVGRAEEFFGEMEFNRVDNTCATYE 654
            R  EA  +W+EM +K LE DVVAYNTIIGGFCK G   RAEEF+ EME + +++T +T E
Sbjct: 306  RTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLE 365

Query: 655  HLICGYCKIGDVDSALLLYKGMCRKGFRPESLTIDEVIRGLCVKSRVSEALEYLRVAVKK 834
            HLI GYC  GDVDSALL+YK M RK F   + T++ +IR LC + R+ EAL+    A++ 
Sbjct: 366  HLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFGFAIEY 425

Query: 835  HDIVPQGTSYEFVIKALCREGRMEDGLKLQAEMVGKGYEPN 957
                P   ++E +I  LC+EG++E   KLQA+MVGKG++PN
Sbjct: 426  SSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPN 466