BLASTX nr result

ID: Bupleurum21_contig00007256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007256
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...    74   1e-11
emb|CBI23583.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...    71   1e-10
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]    71   1e-10
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...    68   7e-10

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = -3

Query: 205 IGRLPMEWAKCLILLVNSSKVKVLCRCIAAPSNLQLMQEILLY 77
           IGRLPMEWAKC++ LVNS KVK+L RCIAAP NL +MQEILLY
Sbjct: 287 IGRLPMEWAKCVVPLVNSQKVKILGRCIAAPGNLHIMQEILLY 329


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = -3

Query: 205 IGRLPMEWAKCLILLVNSSKVKVLCRCIAAPSNLQLMQEILLY 77
           IGRLPMEW KC+I LVNSSKVKVL RC+AAP  L+LMQEI+LY
Sbjct: 391 IGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLY 433


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = -3

Query: 205 IGRLPMEWAKCLILLVNSSKVKVLCRCIAAPSNLQLMQEILLY 77
           IGRLPMEW KC+I LVNSSKVKVL RC+AAP  L+LMQEI+LY
Sbjct: 391 IGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLY 433


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = -3

Query: 205 IGRLPMEWAKCLILLVNSSKVKVLCRCIAAPSNLQLMQEILLY 77
           IGRLPMEW KC+I LVNSSKVKVL RC+AAP  L+LMQEI+LY
Sbjct: 391 IGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLY 433


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = -3

Query: 205 IGRLPMEWAKCLILLVNSSKVKVLCRCIAAPSNLQLMQEILLY 77
           IGRLPMEW KC++ LVNS+KVK L RCIAAP  L +MQEI+LY
Sbjct: 240 IGRLPMEWGKCVVPLVNSNKVKFLGRCIAAPPTLHIMQEIMLY 282


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