BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007245
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-22
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    74   3e-21
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    59   3e-12
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...    50   3e-10
ref|XP_003572154.1| PREDICTED: double-stranded RNA-binding prote...    51   4e-10

>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 75.9 bits (185), Expect(2) = 5e-22
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
 Frame = -3

Query: 434 PVFVSSLMFDGKHYVGDKARNKKDSEQLAARAVILAII---DSDERMSKIVNSKKMLCAA 264
           PVF+S+L+FDG  Y GD  RNKK++EQLAARAVIL++I    S + + +I+ SK  L AA
Sbjct: 253 PVFISTLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAA 312

Query: 263 KDKLKNPCNTQNVAMPVGLQ--------TDSNIEANTAPTISVPPNS 147
            D++K+P ++Q   +PV ++         D   E +TA      P S
Sbjct: 313 LDRVKDPSHSQPNIVPVAVKVGHCSETTVDQEQEVSTAVVRDAAPVS 359



 Score = 54.3 bits (129), Expect(2) = 5e-22
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -2

Query: 666 IALQSLAPQVMEANCSLDFEDLMFCKSMLNEYATKINAEKPIYRTEQEDG 517
           +AL+S+  +V +  C L   D +FCKS+LNE+A K+N EKP Y T Q  G
Sbjct: 201 LALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPG 250


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 73.9 bits (180), Expect(2) = 3e-21
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = -3

Query: 434 PVFVSSLMFDGKHYVGDKARNKKDSEQLAARAVILAII---DSDERMSKIVNSKKMLCAA 264
           PVFVSSL+F+G  Y GD  RNKK++EQLAAR VIL+I+    S   +S+I+ SK  L AA
Sbjct: 136 PVFVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAA 195

Query: 263 KDKLKNPCNTQNVAMPVGLQTDSNIEANTAPTISVPPNSEQ 141
             ++K+P       +P+GL   S I       + V P ++Q
Sbjct: 196 LHRVKDPSYIHTGILPIGL--TSGIPPCKGKEVEVAPGTDQ 234



 Score = 53.9 bits (128), Expect(2) = 3e-21
 Identities = 23/50 (46%), Positives = 35/50 (70%)
 Frame = -2

Query: 666 IALQSLAPQVMEANCSLDFEDLMFCKSMLNEYATKINAEKPIYRTEQEDG 517
           +AL+ ++ ++ +  C L  ED +FCKS+LNE+A K+N EKP Y T Q +G
Sbjct: 84  LALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEG 133


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score = 58.9 bits (141), Expect(2) = 3e-12
 Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
 Frame = -3

Query: 434 PVFVSSLMFDGKHYVGDKARNKKDSEQLAARAVILAI---IDSDERMSKIVNSKKMLCAA 264
           P+FVSS +F+G  Y GD  R KK++EQLAARA +L++   ++S E +SK   SK+ L   
Sbjct: 129 PIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLYVG 188

Query: 263 KDKLKNPCNTQNVAMPV---GLQTDSNIEANTAP 171
             K  +  + QN  MPV    ++T++ + +N  P
Sbjct: 189 FHK-SDSQDAQNSNMPVVGKDIKTEALMVSNVVP 221



 Score = 38.5 bits (88), Expect(2) = 3e-12
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = -2

Query: 666 IALQSLAPQVMEANCSLDF--EDLMFCKSMLNEYATKINAEKPIYRTEQEDG 517
           +AL S+  ++ +      F  ED + CKS+LNEYA K+  E P Y T ++ G
Sbjct: 75  LALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGG 126


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score = 50.4 bits (119), Expect(2) = 3e-10
 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
 Frame = -3

Query: 434 PVFVSSLMFDGKHYVGDKARNKKDSEQLAARAVILAII---DSDERMSKIVNSKKM 276
           P+F++SL+F+G  Y GD AR KK++EQ AA+A IL+I+    S   + +I+ SK +
Sbjct: 117 PIFITSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSI 172



 Score = 40.0 bits (92), Expect(2) = 3e-10
 Identities = 18/48 (37%), Positives = 31/48 (64%)
 Frame = -2

Query: 666 IALQSLAPQVMEANCSLDFEDLMFCKSMLNEYATKINAEKPIYRTEQE 523
           +AL+S+  +  +   SL  +   F KS++NEYA K++ E+P Y T+Q+
Sbjct: 63  LALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQ 110


>ref|XP_003572154.1| PREDICTED: double-stranded RNA-binding protein 4-like [Brachypodium
           distachyon]
          Length = 281

 Score = 50.8 bits (120), Expect(2) = 4e-10
 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 431 VFVSSLMFDGKHYVGDKARNKKDSEQLAARAVILAIIDSDER-MSKIVNSKKMLCAA 264
           +FVSS++FDGK Y G+ A +KKD+EQ AARA + +I+ +    M +I+ SK+ L  A
Sbjct: 152 LFVSSVVFDGKTYTGEAAVSKKDAEQKAARAAVKSILATKNTCMMQIIKSKENLITA 208



 Score = 39.3 bits (90), Expect(2) = 4e-10
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
 Frame = -2

Query: 666 IALQSLAPQVMEANCS------LDFEDLMFCKSMLNEYATKINAEKPIYRTEQEDG 517
           +A + L  ++M+A+        L  +D++FCKS+LNE+A K  A +P Y  ++  G
Sbjct: 91  VAYEILVAKIMDADADVTDILGLIDQDVLFCKSILNEFAVKTKATQPKYSVDRPQG 146