BLASTX nr result

ID: Bupleurum21_contig00007211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007211
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   189   3e-46
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   189   6e-46
ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|1...   183   2e-44
ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus commun...   182   7e-44
ref|XP_002315548.1| predicted protein [Populus trichocarpa] gi|1...   180   3e-43

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  189 bits (481), Expect = 3e-46
 Identities = 84/106 (79%), Positives = 99/106 (93%)
 Frame = +2

Query: 11  MASTVNSSGDPLPTSAVLMSASKHIATRCRNENIAFLKCKKNDPNPEKCLDKGQQVTRCV 190
           MASTV++ G P+PTSAVLM++SKHI +RC +EN+AFLKCKK DPNPEKCLDKG++VTRCV
Sbjct: 1   MASTVDAGGHPIPTSAVLMASSKHIGSRCFSENVAFLKCKKQDPNPEKCLDKGREVTRCV 60

Query: 191 LSLLKDLHQRCTKEMDAYAGCMYYNTDEFELCRKEQKEFEKACPLQ 328
             LLKDLHQRCTKEMDAYAGCMYY+T+EF+LCRKEQ+EFEKACPL+
Sbjct: 61  FGLLKDLHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACPLE 106


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score =  189 bits (479), Expect = 6e-46
 Identities = 83/106 (78%), Positives = 99/106 (93%)
 Frame = +2

Query: 11  MASTVNSSGDPLPTSAVLMSASKHIATRCRNENIAFLKCKKNDPNPEKCLDKGQQVTRCV 190
           MAS V+++GDP+PTSAVLMS+SKHIA +CR+EN+A+L+CK+ DPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 191 LSLLKDLHQRCTKEMDAYAGCMYYNTDEFELCRKEQKEFEKACPLQ 328
           LSLLKDLHQRCTKEMDAY GCMYY+T+EF+LCRKEQ+ FEK CPL+
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106


>ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|118483508|gb|ABK93652.1|
           unknown [Populus trichocarpa]
           gi|118487086|gb|ABK95373.1| unknown [Populus
           trichocarpa] gi|222851629|gb|EEE89176.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score =  183 bits (465), Expect = 2e-44
 Identities = 82/104 (78%), Positives = 95/104 (91%)
 Frame = +2

Query: 17  STVNSSGDPLPTSAVLMSASKHIATRCRNENIAFLKCKKNDPNPEKCLDKGQQVTRCVLS 196
           S V+++G+P+PTSAVL +ASKHIATRC +EN+ FLKCKK DPNPEKCLDKGQQVTRCVL 
Sbjct: 4   SAVDATGNPIPTSAVLTTASKHIATRCFSENVEFLKCKKKDPNPEKCLDKGQQVTRCVLG 63

Query: 197 LLKDLHQRCTKEMDAYAGCMYYNTDEFELCRKEQKEFEKACPLQ 328
           LLKDLHQ+CTKEMDAY GCMYY T+EF+LCRKEQ+ FEKACPL+
Sbjct: 64  LLKDLHQKCTKEMDAYVGCMYYYTNEFDLCRKEQQAFEKACPLE 107


>ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223543929|gb|EEF45455.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 106

 Score =  182 bits (461), Expect = 7e-44
 Identities = 81/106 (76%), Positives = 94/106 (88%)
 Frame = +2

Query: 11  MASTVNSSGDPLPTSAVLMSASKHIATRCRNENIAFLKCKKNDPNPEKCLDKGQQVTRCV 190
           MAS V+++G+P+PTSAVL ++SKHI  RC  EN+ FLKCKK DPNPEKCLDKGQQVTRCV
Sbjct: 1   MASAVDTTGNPIPTSAVLTASSKHITARCFQENVDFLKCKKKDPNPEKCLDKGQQVTRCV 60

Query: 191 LSLLKDLHQRCTKEMDAYAGCMYYNTDEFELCRKEQKEFEKACPLQ 328
           L LLKDLH RCTKEMDAY GCMYY+T+EF+LCRKEQ+ FEKACPL+
Sbjct: 61  LGLLKDLHHRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPLE 106


>ref|XP_002315548.1| predicted protein [Populus trichocarpa] gi|118483667|gb|ABK93727.1|
           unknown [Populus trichocarpa]
           gi|222864588|gb|EEF01719.1| predicted protein [Populus
           trichocarpa]
          Length = 107

 Score =  180 bits (456), Expect = 3e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +2

Query: 14  ASTVNSSGDPLPTSAVLMSASKHIATRCRNENIAFLKCKKNDPNPEKCLDKGQQVTRCVL 193
           AS V+++G+P+PTSAVL ++SKH+ATRC  EN+ FLKCKK DPNPEKCLDKGQQVTRCVL
Sbjct: 3   ASAVDATGNPIPTSAVLTASSKHLATRCFPENVEFLKCKKKDPNPEKCLDKGQQVTRCVL 62

Query: 194 SLLKDLHQRCTKEMDAYAGCMYYNTDEFELCRKEQKEFEKACPLQ 328
            LLKDLHQ+CT EMDAY GCMYY T+EF+LCRKEQ+ FEKACPL+
Sbjct: 63  GLLKDLHQKCTNEMDAYVGCMYYYTNEFDLCRKEQQAFEKACPLE 107


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