BLASTX nr result
ID: Bupleurum21_contig00007191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00007191
(1556 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 663 0.0
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 646 0.0
ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|2... 639 0.0
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2... 638 e-180
ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin... 626 e-177
>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 663 bits (1710), Expect = 0.0
Identities = 310/439 (70%), Positives = 353/439 (80%), Gaps = 6/439 (1%)
Frame = -1
Query: 1556 DELWDINVRSRNEIDPGFYPVREGEPDCSYYIRTGLCRFGNSCRFNHPINRKLAIATARM 1377
D +W +N+RS ++ G YP R GEPDCSYYIRTGLCRFG +CRFNHP NRKLAIATARM
Sbjct: 27 DAMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARM 86
Query: 1376 RGEYPERLGQQECEYYLKTGTCKFGATCKFHHPRDKAGIVGRVSLNVLGYPLRPXXXXXX 1197
+GE+PER+GQ EC+YYLKTGTCKFGATCKFHHPRDKAGI GRVSLN+LGYPLRP
Sbjct: 87 KGEFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEI--- 143
Query: 1196 XXXXXXXXXXXXXXXXXXXXECVYYMRTGQCKFGSTCKYHHPQPSNMMVPYRGSPMY--- 1026
+C YY+RTGQCKFGSTCK+HHPQPS+MMV RGSP+Y
Sbjct: 144 --------------------DCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSV 183
Query: 1025 ---ATPGQQSYPGGITNWPLSRASFISSPRWQGASNYAPLILPQGVVSVQGWNSYNGQFG 855
TPGQQSY GGITNWPLSRASFI SPRWQ S+YAPL+LPQGVVSV GWN+Y+GQ G
Sbjct: 184 PSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSGQLG 243
Query: 854 SHSSADQQETAGNSQHYATSHQNEAAVGGSQGTYTSYRAGSVPVGYYALQRENVFPERPG 675
S S + QQ+T GN+Q Y TS Q+E GSQGT++ YR+GSVP+G+YALQRENVFPERPG
Sbjct: 244 SPSES-QQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPG 302
Query: 674 QPECQFYMKTGDCKYGAVCRFHHPRERLLPVPDCILSPMGLPLRTGEPLCIFYARYGICK 495
QPECQFYMKTGDCK+GAVCRFHHPRERL+P PDC+LSP+GLPLR GEPLCIFY+RYGICK
Sbjct: 303 QPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICK 362
Query: 494 FGPSCKFDHPMGVFTYNMAAQSSTDAPVVQHYLGPSSGTGTMTLSSEGLNEASSVNPGRL 315
FGPSCKFDHPMG+F YN++A SS DAPVV+ LG SSG+ +TLSS+GL EA S P RL
Sbjct: 363 FGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLGSSSGSAALTLSSDGLVEAGSTKPRRL 422
Query: 314 SLTETRQMPSGDNHIGKEG 258
SL ETRQMP GD++I EG
Sbjct: 423 SLPETRQMPPGDDNIDTEG 441
>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 448
Score = 646 bits (1666), Expect = 0.0
Identities = 303/439 (69%), Positives = 349/439 (79%), Gaps = 6/439 (1%)
Frame = -1
Query: 1556 DELWDINVRSRNEIDPGFYPVREGEPDCSYYIRTGLCRFGNSCRFNHPINRKLAIATARM 1377
D +W +N+RS +D G YP GEPDCSYYIRTGLCRFG +CRFNHP NRKLAIA ARM
Sbjct: 36 DAMWQMNLRSSETMDSGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARM 95
Query: 1376 RGEYPERLGQQECEYYLKTGTCKFGATCKFHHPRDKAGIVGRVSLNVLGYPLRPXXXXXX 1197
+GE+PER+GQ EC+YYLKTGTCKFGATCKFHHP+DKAGI GRVSLN+LGYPLRP
Sbjct: 96 KGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGYPLRPNEI--- 152
Query: 1196 XXXXXXXXXXXXXXXXXXXXECVYYMRTGQCKFGSTCKYHHPQPSNMMVPYRGSPMY--- 1026
EC YY+RTGQCKFGSTCK+HHPQP+N+MVP RGSP+Y
Sbjct: 153 --------------------ECAYYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTV 192
Query: 1025 ---ATPGQQSYPGGITNWPLSRASFISSPRWQGASNYAPLILPQGVVSVQGWNSYNGQFG 855
TPGQQSY GG+TNW SRASFI+SPRWQ S+Y PLILPQGVVSV GWN+Y+GQ G
Sbjct: 193 QSPTTPGQQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLG 250
Query: 854 SHSSADQQETAGNSQHYATSHQNEAAVGGSQGTYTSYRAGSVPVGYYALQRENVFPERPG 675
S SS + Q+ GNSQ Y TS Q+E+ GSQGT + RAGS+PVG+YALQR+NVFPERPG
Sbjct: 251 SVSSPEGQQQTGNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFYALQRDNVFPERPG 310
Query: 674 QPECQFYMKTGDCKYGAVCRFHHPRERLLPVPDCILSPMGLPLRTGEPLCIFYARYGICK 495
QPECQFYMKTGDCK+GAVCRFHHPRERL+P PDC+LSP+GLPLR GEPLCIFY+RYG+CK
Sbjct: 311 QPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGVCK 370
Query: 494 FGPSCKFDHPMGVFTYNMAAQSSTDAPVVQHYLGPSSGTGTMTLSSEGLNEASSVNPGRL 315
FGPSCKFDHPMG+FTYN++A SS DAP V+ LG SSG+ +TLS+EGL +A S P RL
Sbjct: 371 FGPSCKFDHPMGIFTYNLSAPSSADAP-VRRLLGSSSGSAALTLSTEGLVDAGSTKPRRL 429
Query: 314 SLTETRQMPSGDNHIGKEG 258
SL+E RQMPSGD++I EG
Sbjct: 430 SLSEPRQMPSGDDNIDTEG 448
>ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|222862776|gb|EEF00283.1|
predicted protein [Populus trichocarpa]
Length = 414
Score = 639 bits (1647), Expect = 0.0
Identities = 303/440 (68%), Positives = 346/440 (78%), Gaps = 7/440 (1%)
Frame = -1
Query: 1556 DELWDINVRSRNEIDPGFYPVREGEPDCSYYIRTGLCRFGNSCRFNHPINRKLAIATARM 1377
D +W +N+RS ++ G YP R GEPDCSYYIRTGLCRFG +CRFNHP NRKLAIA ARM
Sbjct: 1 DAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIAAARM 60
Query: 1376 RGEYPERLGQQECEYYLKTGTCKFGATCKFHHPRDKAGIVGRVSLNVLGYPLRPXXXXXX 1197
+GE+PER+GQ EC+YYLKTGTCKFGATCKFHHPRDKAG+ GRVSLN+LGYPLR
Sbjct: 61 KGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLR------- 113
Query: 1196 XXXXXXXXXXXXXXXXXXXXECVYYMRTGQCKFGSTCKYHHPQPSNMMVPYRGSPMY--- 1026
EC YY+RTGQCKFGSTCK+HHPQP+N+MVP RGSP+Y
Sbjct: 114 ----------------LNEMECAYYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTV 157
Query: 1025 ---ATPGQQSYPGGI-TNWPLSRASFISSPRWQGASNYAPLILPQGVVSVQGWNSYNGQF 858
TPGQQSYPGG+ TNW SRASFI+SPRWQ SNY PLILPQGVVSV GWN+Y+GQ
Sbjct: 158 NSPTTPGQQSYPGGLATNW--SRASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQV 215
Query: 857 GSHSSADQQETAGNSQHYATSHQNEAAVGGSQGTYTSYRAGSVPVGYYALQRENVFPERP 678
GS SS + Q+ GNSQ Y TS QNE+ GSQGT++ YR+ SVP+G+YALQRE+VFPERP
Sbjct: 216 GSVSSPESQQQTGNSQIYGTSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERP 275
Query: 677 GQPECQFYMKTGDCKYGAVCRFHHPRERLLPVPDCILSPMGLPLRTGEPLCIFYARYGIC 498
GQPECQFYMKTGDCK+GAVCRFHHPRERL+P PDC+LS +GLPLR GEPLCIFY+RYGIC
Sbjct: 276 GQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGIC 335
Query: 497 KFGPSCKFDHPMGVFTYNMAAQSSTDAPVVQHYLGPSSGTGTMTLSSEGLNEASSVNPGR 318
KFGPSCKF HPMG+FTYN+ A SS DAP V+ LG SSG+ +TLSSEGL EA S P R
Sbjct: 336 KFGPSCKFHHPMGIFTYNLTASSSADAP-VRRLLGSSSGSAALTLSSEGLVEAGSTKPRR 394
Query: 317 LSLTETRQMPSGDNHIGKEG 258
LSL+E RQMP GD++I G
Sbjct: 395 LSLSEPRQMPPGDDNIDTGG 414
>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
predicted protein [Populus trichocarpa]
Length = 425
Score = 638 bits (1646), Expect = e-180
Identities = 303/440 (68%), Positives = 346/440 (78%), Gaps = 7/440 (1%)
Frame = -1
Query: 1556 DELWDINVRSRNEIDPGFYPVREGEPDCSYYIRTGLCRFGNSCRFNHPINRKLAIATARM 1377
D +W +N+RS ++ G YP R GEPDCSYYIRTGLCRFG +CRFNHP NRKLAIA ARM
Sbjct: 12 DAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARM 71
Query: 1376 RGEYPERLGQQECEYYLKTGTCKFGATCKFHHPRDKAGIVGRVSLNVLGYPLRPXXXXXX 1197
+GE+PER+GQ EC+YYLKTGTCKFGATCKFHHPRDKAGI GRVSLN+LGYPL+P
Sbjct: 72 KGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPLQPNEI--- 128
Query: 1196 XXXXXXXXXXXXXXXXXXXXECVYYMRTGQCKFGSTCKYHHPQPSNMMVPYRGSPMY--- 1026
EC YY+RTGQCKFGSTCK+HHPQP+NMMVP RGSP+Y
Sbjct: 129 --------------------ECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTV 168
Query: 1025 ---ATPGQQSYPGGI-TNWPLSRASFISSPRWQGASNYAPLILPQGVVSVQGWNSYNGQF 858
TPGQQSYPGG+ T W SRASFI+SPRWQ S+Y PLILPQGVVSV GWN+Y+GQ
Sbjct: 169 SSPTTPGQQSYPGGLATTW--SRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQL 226
Query: 857 GSHSSADQQETAGNSQHYATSHQNEAAVGGSQGTYTSYRAGSVPVGYYALQRENVFPERP 678
GS SS + Q+ GNSQ Y TS +E+ GSQGT++ YR+GS P+G+YALQRE+VFPERP
Sbjct: 227 GSVSSPESQQQTGNSQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERP 286
Query: 677 GQPECQFYMKTGDCKYGAVCRFHHPRERLLPVPDCILSPMGLPLRTGEPLCIFYARYGIC 498
GQPECQFYMKTGDCK+GAVCRFHHPRERL+P PDC+LSP+GLPLR GEPLCIFY+RYGIC
Sbjct: 287 GQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGIC 346
Query: 497 KFGPSCKFDHPMGVFTYNMAAQSSTDAPVVQHYLGPSSGTGTMTLSSEGLNEASSVNPGR 318
KFGPSCKFDHPMGVFTYN+ A SS DAP V+ LG SSG+ +TLSSEGL EA P R
Sbjct: 347 KFGPSCKFDHPMGVFTYNLTASSSADAP-VRRLLGSSSGSPGLTLSSEGLVEAGPTKPRR 405
Query: 317 LSLTETRQMPSGDNHIGKEG 258
LSL+E RQMP GD++I G
Sbjct: 406 LSLSEPRQMPPGDDNIDTGG 425
>ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 426
Score = 626 bits (1614), Expect = e-177
Identities = 293/439 (66%), Positives = 344/439 (78%), Gaps = 6/439 (1%)
Frame = -1
Query: 1556 DELWDINVRSRNEIDPGFYPVREGEPDCSYYIRTGLCRFGNSCRFNHPINRKLAIATARM 1377
D +W IN+RS ++ G YP GEPDCSYYIRTGLCRFG +CRFNHP NRKLAIA ARM
Sbjct: 17 DAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARM 76
Query: 1376 RGEYPERLGQQECEYYLKTGTCKFGATCKFHHPRDKAGIVGRVSLNVLGYPLRPXXXXXX 1197
+GE+PER+GQ EC+YYLKTGTCKFGATC+FHHPRDKAGI GRV++N+LGYPLRP
Sbjct: 77 KGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNEP--- 133
Query: 1196 XXXXXXXXXXXXXXXXXXXXECVYYMRTGQCKFGSTCKYHHPQPSNMMVPYRGSPMY--- 1026
EC YY+RTGQCKFG+TCK+HHPQP+NM++ R SP+Y
Sbjct: 134 --------------------ECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTV 173
Query: 1025 ---ATPGQQSYPGGITNWPLSRASFISSPRWQGASNYAPLILPQGVVSVQGWNSYNGQFG 855
TPGQQSY GITNW S +S+I SPRWQG S+YAPLILPQG+VSV GW++Y+GQ G
Sbjct: 174 HSPTTPGQQSYATGITNW--SSSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQMG 231
Query: 854 SHSSADQQETAGNSQHYATSHQNEAAVGGSQGTYTSYRAGSVPVGYYALQRENVFPERPG 675
S S Q+T GN Q Y TS Q+E A GSQG Y+ +R+GSVPVG+YALQREN+FPERP
Sbjct: 232 SDSP---QQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPD 288
Query: 674 QPECQFYMKTGDCKYGAVCRFHHPRERLLPVPDCILSPMGLPLRTGEPLCIFYARYGICK 495
QPECQFYMKTGDCK+GAVCRFHHPRER++P PDC+LSP+GLPLR GEPLC+FY+RYGICK
Sbjct: 289 QPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICK 348
Query: 494 FGPSCKFDHPMGVFTYNMAAQSSTDAPVVQHYLGPSSGTGTMTLSSEGLNEASSVNPGRL 315
FGPSCKFDHPMGVFTYN++A S DAP + LG SSGT + LSSEGL E+ S NP RL
Sbjct: 349 FGPSCKFDHPMGVFTYNISASPSADAP-GRRMLGSSSGTSALNLSSEGLVESGSANPRRL 407
Query: 314 SLTETRQMPSGDNHIGKEG 258
SL+ETRQ+PSGD++I +EG
Sbjct: 408 SLSETRQIPSGDDNIDEEG 426