BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007189
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   591   e-166
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   590   e-166
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   587   e-165
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   586   e-165
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   583   e-164

>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  591 bits (1524), Expect = e-166
 Identities = 288/312 (92%), Positives = 305/312 (97%)
 Frame = -2

Query: 1165 MADAYCSDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 986
            MADA+C+DCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 985  GPTNPLLADGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG 806
            GP+NPLL DGGLSTVI+KPNGV+ DFLSSSLGRWQNRGSNPDR LI+AFKTIATMSDRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 805  LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 626
            LVATIKDRANEIYKKVEDQKS+RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 625  KEIGRAKEYIVKQLELEKGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVQKSEEF 446
            KEIGRAKEYIVKQLE EKGQSVEMGTIHAGDFMRRFCSNLGMTNQ VKAAQEAVQKSEEF
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 445  DIRRSPISIAAAVIYIVTQLSDEKKPLKDVSLATGVAEGTIRNSYKDLYPHLVKIIPTWY 266
            DIRRSP+SIAAAVIYI+TQLSDEKK L+D+S+ATGVAEGTIRNSYKDLYPH+ KIIP+WY
Sbjct: 241  DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY 300

Query: 265  AQEEDLKNLCSP 230
            A+EEDL+NLCSP
Sbjct: 301  AKEEDLRNLCSP 312


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|296088031|emb|CBI35314.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  590 bits (1521), Expect = e-166
 Identities = 287/312 (91%), Positives = 305/312 (97%)
 Frame = -2

Query: 1165 MADAYCSDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 986
            MADA+C+DCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 985  GPTNPLLADGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG 806
            GP+NPLL DGGLSTVI+KPNGV+ DFLSSSLGRWQNRGSNPDR LI+AFKTIATMSDRLG
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 805  LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 626
            LVATIKDRANEIYKKVEDQKS+RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 625  KEIGRAKEYIVKQLELEKGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVQKSEEF 446
            KEIGRAKEYIVKQLE EKGQSVEMGTIHAGDFMRRFCSNLGMTNQ VKAAQEAVQKSEEF
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 445  DIRRSPISIAAAVIYIVTQLSDEKKPLKDVSLATGVAEGTIRNSYKDLYPHLVKIIPTWY 266
            DIRRSP+SIAAAVIYI+TQLSDEKK L+D+S+ATGVAEGTIRNSYKDLYPH+ +IIP+WY
Sbjct: 241  DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY 300

Query: 265  AQEEDLKNLCSP 230
            A+EEDL+NLCSP
Sbjct: 301  AKEEDLRNLCSP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  587 bits (1513), Expect = e-165
 Identities = 287/312 (91%), Positives = 302/312 (96%)
 Frame = -2

Query: 1165 MADAYCSDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 986
            M+DA+CSDCK+ TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 985  GPTNPLLADGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG 806
            GPTNPLLADGGLSTVI+KPNG T +FLSSSLGRWQNRGSNPDR LI+AFKTIATMSDRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 805  LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 626
            LVATIKDRANEIYK+VEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 625  KEIGRAKEYIVKQLELEKGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVQKSEEF 446
            KEIGRAKEYIVKQL LE GQSVEMGTIHAGDFMRRFCSNLGM NQ VKAAQEAVQKSEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 445  DIRRSPISIAAAVIYIVTQLSDEKKPLKDVSLATGVAEGTIRNSYKDLYPHLVKIIPTWY 266
            DIRRSPISIAAAVIYI+TQLSD+KKPLKD+S+ATGVAEGTIRNSYKDLYPH+ KI+P WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 265  AQEEDLKNLCSP 230
            A+EEDLKNLCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata] gi|297328501|gb|EFH58920.1| transcription
            initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 312

 Score =  586 bits (1510), Expect = e-165
 Identities = 288/312 (92%), Positives = 304/312 (97%)
 Frame = -2

Query: 1165 MADAYCSDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 986
            M+DA+CSDCK++TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 985  GPTNPLLADGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG 806
            GPTNPLLADGGL+TVISKPNG + DFLSSSLGRWQNRGSNPDR LI+AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 805  LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 626
            LVATIKDRANEIYK+VEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 625  KEIGRAKEYIVKQLELEKGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVQKSEEF 446
            KEIGRAKEYIVKQL LE GQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQE+VQKSEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 445  DIRRSPISIAAAVIYIVTQLSDEKKPLKDVSLATGVAEGTIRNSYKDLYPHLVKIIPTWY 266
            DIRRSPISIAAAVIYI+TQLSDEKKPL+D+S+ATGVAEGTIRNSYKDLYPHL KIIP WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300

Query: 265  AQEEDLKNLCSP 230
            A+EEDLKNL SP
Sbjct: 301  AKEEDLKNLQSP 312


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
            gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
            Full=Transcription initiation factor IIB-2; AltName:
            Full=General transcription factor TFIIB-2; Short=AtTFIIB2
            gi|6056193|gb|AAF02810.1|AC009400_6 transcription
            initiation factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
            [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
            AT3g10330/F14P13_7 [Arabidopsis thaliana]
            gi|21593436|gb|AAM65403.1| transcription initiation
            factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
            gi|332641371|gb|AEE74892.1| transcription initiation
            factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  583 bits (1504), Expect = e-164
 Identities = 287/312 (91%), Positives = 303/312 (97%)
 Frame = -2

Query: 1165 MADAYCSDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 986
            M+DA+CSDCK++TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 985  GPTNPLLADGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG 806
            GPTNPLLADGGL+TVISKPNG + DFLSSSLGRWQNRGSNPDR LI+AFKTIATM+DRLG
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 805  LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 626
            LVATIKDRANEIYK+VEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 625  KEIGRAKEYIVKQLELEKGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVQKSEEF 446
            KEIGRAKEYIVKQL LE GQ VEMGTIHAGDFMRRFCSNLGMTNQTVKAAQE+VQKSEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 445  DIRRSPISIAAAVIYIVTQLSDEKKPLKDVSLATGVAEGTIRNSYKDLYPHLVKIIPTWY 266
            DIRRSPISIAAAVIYI+TQLSDEKKPL+D+S+ATGVAEGTIRNSYKDLYPHL KIIP WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300

Query: 265  AQEEDLKNLCSP 230
            A+EEDLKNL SP
Sbjct: 301  AKEEDLKNLQSP 312