BLASTX nr result

ID: Bupleurum21_contig00007113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007113
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36899.3| unnamed protein product [Vitis vinifera]              343   4e-92
ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [...   343   4e-92
emb|CBI22951.3| unnamed protein product [Vitis vinifera]              335   1e-89
ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [...   335   1e-89
ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communi...   330   2e-88

>emb|CBI36899.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  343 bits (880), Expect = 4e-92
 Identities = 161/198 (81%), Positives = 176/198 (88%)
 Frame = -3

Query: 849 SHVVEHCGADNNGQCKSNGPLNPRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADK 670
           S  VEH G  N+GQCK    L PRPHSVSILEFGAVGDGKT NT+AF+NAIFYLKSFADK
Sbjct: 35  SCAVEHNGVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADK 94

Query: 669 GGAQLYVPPGKWLTGSFNLTSHLTLFLEKEAIILGSQDIAHWVVVDALPSYGRGIELPGG 490
           GGAQLYVPPG+WLTGSFNLTSHLTLFLE+ A ILGSQD  HW ++D LPSYGRGIELPGG
Sbjct: 95  GGAQLYVPPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGG 154

Query: 489 RYRSLITGNNLVDVVITGDNGTIDGQGSVWWEQFSTHSLNYSRPHLVEFISSEDVVVSNL 310
           RYRSLI G NL DVVITG+NGTIDGQGSVWWE FS+HSLNYSRPH+VEFISS D+++SNL
Sbjct: 155 RYRSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNL 214

Query: 309 TFLNSPSYNIHPVYCSNV 256
           TFLNSP++NIHPVYCSNV
Sbjct: 215 TFLNSPAWNIHPVYCSNV 232



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 118 ICIEKSNISVSYDAIVLKSGWDEYGISLGKPTSYVHIR 5
           ICIE SNIS+ YDAIVLKSGWDEYGI+ GKPT  VHIR
Sbjct: 259 ICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIR 296


>ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
          Length = 542

 Score =  343 bits (880), Expect = 4e-92
 Identities = 161/198 (81%), Positives = 176/198 (88%)
 Frame = -3

Query: 849 SHVVEHCGADNNGQCKSNGPLNPRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADK 670
           S  VEH G  N+GQCK    L PRPHSVSILEFGAVGDGKT NT+AF+NAIFYLKSFADK
Sbjct: 100 SCAVEHNGVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADK 159

Query: 669 GGAQLYVPPGKWLTGSFNLTSHLTLFLEKEAIILGSQDIAHWVVVDALPSYGRGIELPGG 490
           GGAQLYVPPG+WLTGSFNLTSHLTLFLE+ A ILGSQD  HW ++D LPSYGRGIELPGG
Sbjct: 160 GGAQLYVPPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGG 219

Query: 489 RYRSLITGNNLVDVVITGDNGTIDGQGSVWWEQFSTHSLNYSRPHLVEFISSEDVVVSNL 310
           RYRSLI G NL DVVITG+NGTIDGQGSVWWE FS+HSLNYSRPH+VEFISS D+++SNL
Sbjct: 220 RYRSLINGPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNL 279

Query: 309 TFLNSPSYNIHPVYCSNV 256
           TFLNSP++NIHPVYCSNV
Sbjct: 280 TFLNSPAWNIHPVYCSNV 297



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 118 ICIEKSNISVSYDAIVLKSGWDEYGISLGKPTSYVHIR 5
           ICIE SNIS+ YDAIVLKSGWDEYGI+ GKPT  VHIR
Sbjct: 324 ICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIR 361


>emb|CBI22951.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  335 bits (859), Expect = 1e-89
 Identities = 159/198 (80%), Positives = 179/198 (90%)
 Frame = -3

Query: 849 SHVVEHCGADNNGQCKSNGPLNPRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADK 670
           S+ VE  G +  GQC ++  L+PRPHSVSILEFGAVGDGKTLNT+AFQNAIFYLKSFADK
Sbjct: 12  SNAVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADK 71

Query: 669 GGAQLYVPPGKWLTGSFNLTSHLTLFLEKEAIILGSQDIAHWVVVDALPSYGRGIELPGG 490
           GGAQLYVPPGKWLTGSFNLTSHLTLFLE+ A+ILGSQD +HW V++ LPSYGRGIELPGG
Sbjct: 72  GGAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGG 131

Query: 489 RYRSLITGNNLVDVVITGDNGTIDGQGSVWWEQFSTHSLNYSRPHLVEFISSEDVVVSNL 310
           RYRSLI G  L DVVITGDNGTI+GQGSVWW+ F++HSLNYSRPHLVEF++S +VVVSNL
Sbjct: 132 RYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNL 191

Query: 309 TFLNSPSYNIHPVYCSNV 256
           TFLN+P+YNIHPVYCSNV
Sbjct: 192 TFLNAPAYNIHPVYCSNV 209



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -2

Query: 115 CIEKSNISVSYDAIVLKSGWDEYGISLGKPTSYVHIR 5
           CIE  +I++ +DAI LKSGWDEYGI+ G+PT+ VHIR
Sbjct: 237 CIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIR 273


>ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
          Length = 457

 Score =  335 bits (859), Expect = 1e-89
 Identities = 159/198 (80%), Positives = 179/198 (90%)
 Frame = -3

Query: 849 SHVVEHCGADNNGQCKSNGPLNPRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADK 670
           S+ VE  G +  GQC ++  L+PRPHSVSILEFGAVGDGKTLNT+AFQNAIFYLKSFADK
Sbjct: 14  SNAVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADK 73

Query: 669 GGAQLYVPPGKWLTGSFNLTSHLTLFLEKEAIILGSQDIAHWVVVDALPSYGRGIELPGG 490
           GGAQLYVPPGKWLTGSFNLTSHLTLFLE+ A+ILGSQD +HW V++ LPSYGRGIELPGG
Sbjct: 74  GGAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGG 133

Query: 489 RYRSLITGNNLVDVVITGDNGTIDGQGSVWWEQFSTHSLNYSRPHLVEFISSEDVVVSNL 310
           RYRSLI G  L DVVITGDNGTI+GQGSVWW+ F++HSLNYSRPHLVEF++S +VVVSNL
Sbjct: 134 RYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNL 193

Query: 309 TFLNSPSYNIHPVYCSNV 256
           TFLN+P+YNIHPVYCSNV
Sbjct: 194 TFLNAPAYNIHPVYCSNV 211



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -2

Query: 115 CIEKSNISVSYDAIVLKSGWDEYGISLGKPTSYVHIR 5
           CIE  +I++ +DAI LKSGWDEYGI+ G+PT+ VHIR
Sbjct: 239 CIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIR 275


>ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
           gi|223544070|gb|EEF45596.1| Polygalacturonase, putative
           [Ricinus communis]
          Length = 454

 Score =  330 bits (847), Expect = 2e-88
 Identities = 156/199 (78%), Positives = 179/199 (89%)
 Frame = -3

Query: 849 SHVVEHCGADNNGQCKSNGPLNPRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADK 670
           S+ +   G +++GQC +   L+PRPHSVSILEFGAVGDGKTLNT++FQNAIFYLKSFADK
Sbjct: 12  SNAIVIYGEESSGQCDNKPSLDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADK 71

Query: 669 GGAQLYVPPGKWLTGSFNLTSHLTLFLEKEAIILGSQDIAHWVVVDALPSYGRGIELPGG 490
           GGA+LYVPPG+WLTGSFNLTSHLTLFLEK A+ILGSQD +H+ +++ LPSYGRGIELPGG
Sbjct: 72  GGAKLYVPPGRWLTGSFNLTSHLTLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGG 131

Query: 489 RYRSLITGNNLVDVVITGDNGTIDGQGSVWWEQFSTHSLNYSRPHLVEFISSEDVVVSNL 310
           RYRSLI G  L DVVITGDNGTIDGQGSVWW+ F++HSLNYSRPHLVEFI SE +VVSNL
Sbjct: 132 RYRSLINGYKLRDVVITGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNL 191

Query: 309 TFLNSPSYNIHPVYCSNVL 253
           TFLN+P+YNIHPVYCSNVL
Sbjct: 192 TFLNAPAYNIHPVYCSNVL 210


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