BLASTX nr result

ID: Bupleurum21_contig00007110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007110
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49408.1| PRF [Solanum lycopersicum]                              76   2e-12
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    76   2e-12
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          76   2e-12
gb|AET22504.1| hypothetical protein [Solanum lycopersicum] gi|35...    70   2e-10
gb|AET22503.1| hypothetical protein [Solanum lycopersicum]             70   2e-10

>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = +2

Query: 2    KTLKLLNSTIPICKSGRLSTSFTFPQNLKKLSMSNTYLDWSEAWVFQMIPNLEFLKLKLH 181
            ++LKL++++ P     +L   F FP  L++L++S   L W++  +   +PNL  LKL L 
Sbjct: 1656 ESLKLVSNSYP----AKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLR 1711

Query: 182  AFVGREWETSQESFLRLKFLKLDELNIVSWTTS 280
            AF G  WE     FL LK+LKLD L +V W+ S
Sbjct: 1712 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS 1744


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = +2

Query: 2    KTLKLLNSTIPICKSGRLSTSFTFPQNLKKLSMSNTYLDWSEAWVFQMIPNLEFLKLKLH 181
            ++LKL++++ P     +L   F FP  L++L++S   L W++  +   +PNL  LKL L 
Sbjct: 1657 ESLKLVSNSYP----AKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLR 1712

Query: 182  AFVGREWETSQESFLRLKFLKLDELNIVSWTTS 280
            AF G  WE     FL LK+LKLD L +V W+ S
Sbjct: 1713 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS 1745


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = +2

Query: 2    KTLKLLNSTIPICKSGRLSTSFTFPQNLKKLSMSNTYLDWSEAWVFQMIPNLEFLKLKLH 181
            ++LKL++++ P     +L   F FP  L++L++S   L W++  +   +PNL  LKL L 
Sbjct: 1656 ESLKLVSNSYP----AKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLR 1711

Query: 182  AFVGREWETSQESFLRLKFLKLDELNIVSWTTS 280
            AF G  WE     FL LK+LKLD L +V W+ S
Sbjct: 1712 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS 1744


>gb|AET22504.1| hypothetical protein [Solanum lycopersicum]
           gi|356600308|gb|AET22505.1| hypothetical protein
           [Solanum pimpinellifolium]
          Length = 886

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = +2

Query: 71  FPQNLKKLSMSNTYLDWSEAWVFQMIPNLEFLKLKLHAFVGREWETSQESFLRLKFLKLD 250
           FP NLK L++S + L W +A V   +PNLE LKLK  +F G EWET +E F RLK+L ++
Sbjct: 744 FPPNLKNLTLSCSLLLWQDARVLGNLPNLEVLKLKYFSFQGPEWETDEEGFHRLKYLLVE 803

Query: 251 ELNIVSW 271
             ++V W
Sbjct: 804 SRDLVIW 810


>gb|AET22503.1| hypothetical protein [Solanum lycopersicum]
          Length = 888

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = +2

Query: 71  FPQNLKKLSMSNTYLDWSEAWVFQMIPNLEFLKLKLHAFVGREWETSQESFLRLKFLKLD 250
           FP NLK L++S + L W +A V   +PNLE LKLK  +F G EWET +E F RLK+L ++
Sbjct: 746 FPPNLKNLTLSCSLLLWQDARVLGNLPNLEVLKLKYFSFQGPEWETDEEGFHRLKYLLVE 805

Query: 251 ELNIVSW 271
             ++V W
Sbjct: 806 SRDLVVW 812