BLASTX nr result

ID: Bupleurum21_contig00007099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007099
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis ...   256   6e-66
ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2...   254   4e-65
ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protei...   253   5e-65
ref|XP_003519270.1| PREDICTED: mitoferrin-like [Glycine max]          252   1e-64
emb|CAA07568.1| Mitochondrial carrier protein [Ribes nigrum]          249   8e-64

>ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera]
          Length = 327

 Score =  256 bits (655), Expect = 6e-66
 Identities = 127/170 (74%), Positives = 141/170 (82%)
 Frame = -2

Query: 511 TPMDVVKQRLQLKNSPYKGVGDCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAYEA 332
           TPMD+VKQRLQLK+SPYKGV DCV+RVL EEG  AFY SYRTTV+MNAPFTAVHFA YEA
Sbjct: 150 TPMDMVKQRLQLKSSPYKGVMDCVKRVLMEEGIQAFYASYRTTVVMNAPFTAVHFATYEA 209

Query: 331 AKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSS 152
           AK+GLME+SP++ ADDE                    TPLDVVKT+LQCQGVCGCDRFSS
Sbjct: 210 AKRGLMEVSPEN-ADDENLVVHATAGAVAGALAAAVTTPLDVVKTQLQCQGVCGCDRFSS 268

Query: 151 CSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFFQE 2
            SI DV+E+IVKKDGYGGLMRGW+PRMLFHAPAAAICWSTYEAAK+FF+E
Sbjct: 269 GSIRDVLETIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEE 318



 Score =  123 bits (309), Expect = 8e-26
 Identities = 66/103 (64%), Positives = 74/103 (71%)
 Frame = -3

Query: 948 DYYPEIAISQSTHDGLEFWQFMVAGSVAGSVEHMAMYPVDTLKTRMQAVGXXXXXXXSAP 769
           DY PEI ++ S+HDGLEFWQFM+AGS+AGSVEHMAM+PVDTLKTRMQ +G        AP
Sbjct: 20  DYRPEITVN-SSHDGLEFWQFMIAGSIAGSVEHMAMFPVDTLKTRMQVIG----GSYPAP 74

Query: 768 IINLRQSLSSILKIEGPAGLYRXXXXXXXXXXXXXAVYFSVYE 640
            I LRQ L SILK+EGPAGLYR             AVYFSVYE
Sbjct: 75  SIGLRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAVYFSVYE 117


>ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  254 bits (648), Expect = 4e-65
 Identities = 126/168 (75%), Positives = 138/168 (82%)
 Frame = -2

Query: 511 TPMDVVKQRLQLKNSPYKGVGDCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAYEA 332
           TPMDVVKQRLQLK+SPYKGV DCVRRVL EEG GAFY SY+TTV+MNAPFTAVHFA YEA
Sbjct: 154 TPMDVVKQRLQLKSSPYKGVVDCVRRVLVEEGIGAFYASYKTTVVMNAPFTAVHFATYEA 213

Query: 331 AKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSS 152
           AK+GL+E+SPD +ADDE                    TPLDVVKT+LQCQGVCGCDRFSS
Sbjct: 214 AKRGLIEVSPD-IADDERLVVHATAGAAAGALAAIVTTPLDVVKTQLQCQGVCGCDRFSS 272

Query: 151 CSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFF 8
            SIG+VI+ IVKKDGY GLMRGW+PRMLFHAPAAAICWSTYEA+K FF
Sbjct: 273 SSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASKDFF 320



 Score =  108 bits (270), Expect = 3e-21
 Identities = 55/100 (55%), Positives = 68/100 (68%)
 Frame = -3

Query: 939 PEIAISQSTHDGLEFWQFMVAGSVAGSVEHMAMYPVDTLKTRMQAVGXXXXXXXSAPIIN 760
           PE+++S++ HDGL FWQFMVAGS+AGS+EHMAM+PVDTLKTRMQA+            +N
Sbjct: 24  PELSVSENPHDGLHFWQFMVAGSIAGSIEHMAMFPVDTLKTRMQAI--VGSGSYPVQNVN 81

Query: 759 LRQSLSSILKIEGPAGLYRXXXXXXXXXXXXXAVYFSVYE 640
           +RQ+  SI+K EG AG YR             AVYFSVYE
Sbjct: 82  VRQACKSIMKNEGAAGFYRGIGAMGLGAGPAHAVYFSVYE 121


>ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protein MRS3-like [Glycine
           max]
          Length = 324

 Score =  253 bits (647), Expect = 5e-65
 Identities = 126/170 (74%), Positives = 138/170 (81%)
 Frame = -2

Query: 511 TPMDVVKQRLQLKNSPYKGVGDCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAYEA 332
           TPMD+VKQRLQL NS YKGV DCV+RV+ EEGFGAFY SYRTTVLMNAPFTAVHF  YEA
Sbjct: 145 TPMDMVKQRLQLGNSGYKGVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEA 204

Query: 331 AKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSS 152
           AK+GL+E+SP+SV DDE                    TPLDVVKT+LQCQGVCGCDRF S
Sbjct: 205 AKRGLLEVSPESV-DDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKS 263

Query: 151 CSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFFQE 2
            SIGDVI++IVKKDGY GLMRGW+PRMLFHAPAAAICWSTYEA KSFFQ+
Sbjct: 264 GSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQD 313



 Score =  104 bits (260), Expect = 4e-20
 Identities = 54/104 (51%), Positives = 69/104 (66%)
 Frame = -3

Query: 948 DYYPEIAISQSTHDGLEFWQFMVAGSVAGSVEHMAMYPVDTLKTRMQAVGXXXXXXXSAP 769
           D++ ++ +S  THDGL FWQFM+AGS+AG VEHMAM+PVDT+KTRMQA+G          
Sbjct: 17  DFHADLTVS--THDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQAIG-----SCPVK 69

Query: 768 IINLRQSLSSILKIEGPAGLYRXXXXXXXXXXXXXAVYFSVYET 637
            + +R +L SIL+ EGP+ LYR             AVYFSVYET
Sbjct: 70  SVTVRHALKSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYET 113



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
 Frame = -2

Query: 508 PMDVVKQRLQLKNS-PYKGVG--DCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAY 338
           P+D VK R+Q   S P K V     ++ +L  EG  A Y       L   P  AV+F+ Y
Sbjct: 52  PVDTVKTRMQAIGSCPVKSVTVRHALKSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVY 111

Query: 337 EAAKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRF 158
           E  KK   E SP + A                       TP+D+VK RLQ  G  G    
Sbjct: 112 ETCKKKFSEGSPSNAA------AHAASGVCATVASDAVFTPMDMVKQRLQL-GNSGYK-- 162

Query: 157 SSCSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAK 17
               + D ++ ++ ++G+G     +   +L +AP  A+ ++TYEAAK
Sbjct: 163 ---GVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEAAK 206


>ref|XP_003519270.1| PREDICTED: mitoferrin-like [Glycine max]
          Length = 325

 Score =  252 bits (644), Expect = 1e-64
 Identities = 126/170 (74%), Positives = 137/170 (80%)
 Frame = -2

Query: 511 TPMDVVKQRLQLKNSPYKGVGDCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAYEA 332
           TPMD+VKQRLQL NS YKGV DCV+RV+ EEGFGAFY SYRTTVLMNAPFTAVHF  YEA
Sbjct: 146 TPMDMVKQRLQLGNSGYKGVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEA 205

Query: 331 AKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSS 152
           AK+GLME+SP+SV DDE                    TPLDVVKT+LQCQGVCGCDRF+S
Sbjct: 206 AKRGLMEVSPESV-DDERLVVHATAGAAAGGLAAVVTTPLDVVKTQLQCQGVCGCDRFTS 264

Query: 151 CSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFFQE 2
            SIGDVI +IVKKDGY GLMRGW+PRMLFHAPAAAICWSTYEA KS FQ+
Sbjct: 265 GSIGDVIRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSLFQD 314



 Score =  102 bits (253), Expect = 3e-19
 Identities = 52/104 (50%), Positives = 70/104 (67%)
 Frame = -3

Query: 948 DYYPEIAISQSTHDGLEFWQFMVAGSVAGSVEHMAMYPVDTLKTRMQAVGXXXXXXXSAP 769
           D++ ++ +S  +HDGL+FWQFM+AGS+AG VEHMAM+PVDT+KTRMQA+G          
Sbjct: 17  DFHADLTVS--SHDGLQFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQALG-----SCPVK 69

Query: 768 IINLRQSLSSILKIEGPAGLYRXXXXXXXXXXXXXAVYFSVYET 637
            + +R +L +IL+ EGP+ LYR             AVYFSVYET
Sbjct: 70  SVTVRHALKTILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYET 113



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
 Frame = -2

Query: 508 PMDVVKQRLQ-LKNSPYKGVG--DCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAY 338
           P+D VK R+Q L + P K V     ++ +L  EG  A Y       L   P  AV+F+ Y
Sbjct: 52  PVDTVKTRMQALGSCPVKSVTVRHALKTILQSEGPSALYRGIGAMGLGAGPAHAVYFSVY 111

Query: 337 EAAKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRF 158
           E  KK   E +P S A                       TP+D+VK RLQ  G  G    
Sbjct: 112 ETCKKKFSEGNPSSNA-----AAHAASGVCATVASDAVLTPMDMVKQRLQL-GNSGYK-- 163

Query: 157 SSCSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFFQE 2
               + D ++ ++ ++G+G     +   +L +AP  A+ ++TYEAAK    E
Sbjct: 164 ---GVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEAAKRGLME 212


>emb|CAA07568.1| Mitochondrial carrier protein [Ribes nigrum]
          Length = 289

 Score =  249 bits (637), Expect = 8e-64
 Identities = 125/170 (73%), Positives = 139/170 (81%)
 Frame = -2

Query: 511 TPMDVVKQRLQLKNSPYKGVGDCVRRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFAAYEA 332
           TPMDVVKQRLQL++SPYKGV DCVRRVL EEG GAFY SYRTTV+MNAPFTAVHFA YEA
Sbjct: 110 TPMDVVKQRLQLQSSPYKGVVDCVRRVLVEEGIGAFYASYRTTVVMNAPFTAVHFATYEA 169

Query: 331 AKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSS 152
            KKGL+E+SP++ A+DE                    TPLDVVKT+LQCQGVCGCDRFSS
Sbjct: 170 TKKGLLEVSPET-ANDENLLVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFSS 228

Query: 151 CSIGDVIESIVKKDGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKSFFQE 2
            SI DVI SIVKK+GY GLMRGW+PRMLFHAPAAAICWSTYEA+K+FFQ+
Sbjct: 229 SSIQDVIGSIVKKNGYVGLMRGWIPRMLFHAPAAAICWSTYEASKTFFQK 278



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = -3

Query: 885 MVAGSVAGSVEHMAMYPVDTLKTRMQAVGXXXXXXXSAPIINLRQSLSSILKIEGPAGLY 706
           M+AGS+AGS+EHMAMYPVDTLKTR+QA+G       SA    LRQ+L SILK+EGPAGLY
Sbjct: 1   MIAGSIAGSIEHMAMYPVDTLKTRIQAIG-----SCSAQSAGLRQALGSILKVEGPAGLY 55

Query: 705 RXXXXXXXXXXXXXAVYFSVYE 640
           R             AVYFSVYE
Sbjct: 56  RGIGAMGLGAGPAHAVYFSVYE 77


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