BLASTX nr result

ID: Bupleurum21_contig00007062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007062
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|db...   231   6e-59
gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]            230   1e-58
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   230   1e-58
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   229   1e-58
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   229   2e-58

>gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|dbj|BAM05543.1|
           beta-tubulin 1 [Eucalyptus pilularis]
          Length = 444

 Score =  231 bits (588), Expect = 6e-59
 Identities = 104/112 (92%), Positives = 110/112 (98%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDASGNYHGESHVQLERVNVYYNEASGGRYV 183
           MREILH+QAGQCGNQIGGKFWEVVC+EHGIDA+GNY G+SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCEEHGIDAAGNYTGDSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGAEL 339
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEGAEL
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGRIFRPDNFVFGQNGAGNNWAKGHYTEGAEL 112


>gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]
          Length = 405

 Score =  230 bits (586), Expect = 1e-58
 Identities = 104/112 (92%), Positives = 109/112 (97%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDASGNYHGESHVQLERVNVYYNEASGGRYV 183
           MREILH+QAGQCGNQIGGKFWEVVC+EHGIDA GNY G+SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCEEHGIDAXGNYTGDSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGAEL 339
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEGAEL
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGRIFRPDNFVFGQNGAGNNWAKGHYTEGAEL 112


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  230 bits (586), Expect = 1e-58
 Identities = 105/112 (93%), Positives = 108/112 (96%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDASGNYHGESHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID +GNY G SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGAEL 339
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEGAEL
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAEL 112


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  229 bits (585), Expect = 1e-58
 Identities = 105/112 (93%), Positives = 108/112 (96%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDASGNYHGESHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID +GNY G SHVQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGAEL 339
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEGAEL
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAEL 112


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  229 bits (584), Expect = 2e-58
 Identities = 104/112 (92%), Positives = 108/112 (96%)
 Frame = +1

Query: 4   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDASGNYHGESHVQLERVNVYYNEASGGRYV 183
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID  GNY G+SH+QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHLQLERVNVYYNEASGGRYV 60

Query: 184 PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFIFGQNGAGNNWAKGHYTEGAEL 339
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNF+FGQNGAGNNWAKGHYTEGAEL
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAEL 112


Top