BLASTX nr result

ID: Bupleurum21_contig00007060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007060
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   131   2e-28
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           128   1e-27
gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]              127   3e-27
gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]              126   4e-27
ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...   126   4e-27

>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  131 bits (329), Expect = 2e-28
 Identities = 66/76 (86%), Positives = 69/76 (90%)
 Frame = -1

Query: 475 MASTDTDFEDLFPEKKRVKNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 296
           M S +  FED   EKKRV+NPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 295 GATVALMVGTAYYYGE 248
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  128 bits (321), Expect = 1e-27
 Identities = 63/77 (81%), Positives = 70/77 (90%)
 Frame = -1

Query: 478 KMASTDTDFEDLFPEKKRVKNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVV 299
           KM+S + D EDLF EKKRV+NP VP+GAL+TAGVLTAGLISFR+GNSQLGQ LMRARVVV
Sbjct: 14  KMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVV 73

Query: 298 QGATVALMVGTAYYYGE 248
           QGATVALMVGT YYYG+
Sbjct: 74  QGATVALMVGTGYYYGD 90


>gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  127 bits (318), Expect = 3e-27
 Identities = 63/76 (82%), Positives = 69/76 (90%)
 Frame = -1

Query: 475 MASTDTDFEDLFPEKKRVKNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 296
           M+S +  FE+L  EKKRV+NP VP+GALITAGVLTAGLISFRQGNSQLGQ LMRARVVVQ
Sbjct: 1   MSSREPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 295 GATVALMVGTAYYYGE 248
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  126 bits (317), Expect = 4e-27
 Identities = 63/76 (82%), Positives = 69/76 (90%)
 Frame = -1

Query: 475 MASTDTDFEDLFPEKKRVKNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 296
           M+S +  FE+L  EKKRV+NP VP+GALITAGVLTAGLISFRQGNSQLGQ LMRARVVVQ
Sbjct: 1   MSSGEPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 295 GATVALMVGTAYYYGE 248
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  126 bits (317), Expect = 4e-27
 Identities = 62/76 (81%), Positives = 70/76 (92%)
 Frame = -1

Query: 475 MASTDTDFEDLFPEKKRVKNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 296
           M++ + D EDLF EKKRV+NP VP+GAL+TAGVLTAGLISFR+GNSQLGQ LMRARVVVQ
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 295 GATVALMVGTAYYYGE 248
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


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