BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007056
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524666.1| Cytochrome c oxidase polypeptide Vc-2, putat...    66   3e-14
ref|NP_001119340.1| putative cytochrome c oxidase subunit 5C-4 [...    70   6e-14
ref|XP_002868657.1| hypothetical protein ARALYDRAFT_493950 [Arab...    71   1e-13
sp|P19173.3|COX5C_IPOBA RecName: Full=Cytochrome c oxidase subun...    64   2e-11
gb|ACG39497.1| cytochrome c oxidase polypeptide Vc [Zea mays]          67   3e-11

>ref|XP_002524666.1| Cytochrome c oxidase polypeptide Vc-2, putative [Ricinus communis]
           gi|223536027|gb|EEF37685.1| Cytochrome c oxidase
           polypeptide Vc-2, putative [Ricinus communis]
          Length = 65

 Score = 66.2 bits (160), Expect(2) = 3e-14
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 226 LTAGGLWKMHHWNNQKRTREFYNLLDKGVISVVVEDE 116
           L AG LWKMHHWNNQKR +EFY+LL++G ISVVVEDE
Sbjct: 29  LGAGLLWKMHHWNNQKRAKEFYDLLERGEISVVVEDE 65



 Score = 37.0 bits (84), Expect(2) = 3e-14
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = -1

Query: 311 MGAAQKIGHVAYQGGPSVIKEIVIGIAL 228
           M AA+K+ H AY G PS+IKEI+ GI+L
Sbjct: 1   MAAARKVAHAAYNG-PSIIKEIIYGISL 27


>ref|NP_001119340.1| putative cytochrome c oxidase subunit 5C-4 [Arabidopsis thaliana]
           gi|48428152|sp|Q9FNE0.1|CX5C4_ARATH RecName:
           Full=Putative cytochrome c oxidase subunit 5C-4;
           AltName: Full=Cytochrome c oxidase polypeptide Vc-4
           gi|10178149|dbj|BAB11594.1| cytochrome c oxidase Vc
           subunit [Arabidopsis thaliana]
           gi|332007158|gb|AED94541.1| putative cytochrome c
           oxidase subunit 5C-4 [Arabidopsis thaliana]
          Length = 65

 Score = 69.7 bits (169), Expect(2) = 6e-14
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -2

Query: 217 GGLWKMHHWNNQKRTREFYNLLDKGVISVVVEDE 116
           GGLWKMHHWNNQ+RT+EFY+LL+KG ISVVVEDE
Sbjct: 32  GGLWKMHHWNNQRRTKEFYDLLEKGEISVVVEDE 65



 Score = 32.3 bits (72), Expect(2) = 6e-14
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -1

Query: 311 MGAAQKIGHVAYQGGPSVIKEIVIGIAL 228
           M   QKIG   Y+G PSV+KEI+ GI L
Sbjct: 1   MANVQKIGKAVYKG-PSVVKEIIYGITL 27


>ref|XP_002868657.1| hypothetical protein ARALYDRAFT_493950 [Arabidopsis lyrata subsp.
           lyrata] gi|297314493|gb|EFH44916.1| hypothetical protein
           ARALYDRAFT_493950 [Arabidopsis lyrata subsp. lyrata]
          Length = 65

 Score = 71.2 bits (173), Expect(2) = 1e-13
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -2

Query: 226 LTAGGLWKMHHWNNQKRTREFYNLLDKGVISVVVEDE 116
           L  GGLWKMHHWNNQ+RT+EFY+LL+KG ISVVVEDE
Sbjct: 29  LAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVEDE 65



 Score = 30.0 bits (66), Expect(2) = 1e-13
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 311 MGAAQKIGHVAYQGGPSVIKEIVIGIAL 228
           M    KIG   Y+G PSV+KEI+ GI L
Sbjct: 1   MANVPKIGKAVYKG-PSVVKEIIYGITL 27


>sp|P19173.3|COX5C_IPOBA RecName: Full=Cytochrome c oxidase subunit 5C; AltName:
           Full=Cytochrome c oxidase polypeptide Vc
           gi|58368|emb|CAA37470.1| unnamed protein product
           [Ipomoea batatas] gi|688313|gb|AAB31231.1| cytochrome c
           oxidase subunit Vc [Ipomoea batatas]
          Length = 64

 Score = 64.3 bits (155), Expect(2) = 2e-11
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = -2

Query: 226 LTAGGLWKMHHWNNQKRTREFYNLLDKGVISVVVEDE 116
           L AGG WKMHHWN+Q+RT+EFY++L+KG ISVV ++E
Sbjct: 28  LVAGGFWKMHHWNSQRRTKEFYDMLEKGQISVVADEE 64



 Score = 29.3 bits (64), Expect(2) = 2e-11
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 305 AAQKIGHVAYQGGPSVIKEIVIGIAL 228
           A   + H+ Y+G PSV+KE+VIG +L
Sbjct: 2   AGGHVAHLVYKG-PSVVKELVIGFSL 26


>gb|ACG39497.1| cytochrome c oxidase polypeptide Vc [Zea mays]
          Length = 77

 Score = 67.0 bits (162), Expect(2) = 3e-11
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -2

Query: 226 LTAGGLWKMHHWNNQKRTREFYNLLDKGVISVVVEDE 116
           L AGG+WKMHHWN Q++TR FY++LDKG ISVVVED+
Sbjct: 28  LIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVVVEDQ 64



 Score = 26.2 bits (56), Expect(2) = 3e-11
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 305 AAQKIGHVAYQGGPSVIKEIVIGIAL 228
           A  ++ H   +G PSV+KEI IG+ L
Sbjct: 2   AGGRVAHATLKG-PSVVKEIFIGLTL 26