BLASTX nr result

ID: Bupleurum21_contig00007048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007048
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324777.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-77
ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu...   208   7e-77
ref|XP_002308535.1| predicted protein [Populus trichocarpa] gi|2...   206   9e-77
ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 i...   203   1e-75
ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [...   203   2e-75

>ref|XP_002324777.1| predicted protein [Populus trichocarpa] gi|222866211|gb|EEF03342.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  206 bits (523), Expect(2) = 3e-77
 Identities = 102/165 (61%), Positives = 120/165 (72%)
 Frame = -3

Query: 827 YHPRSVDEVFVDFKARRTALIGALTTEAAEFYKLCDPEKENLCLYGYPNEQWEVNLPADE 648
           Y+PR+V+EVF DFK RR  +I ALTT+  EFY+ CDPEKENLCLYG+P+EQWEVNLPA+E
Sbjct: 7   YNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEE 66

Query: 647 VPPELPEPALGINFARDGMQEKDWLSLVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 468
           VPPELPEPALGINFARDGMQEKDWLSLVAV                              
Sbjct: 67  VPPELPEPALGINFARDGMQEKDWLSLVAV--------------------HSDAWLLSVA 106

Query: 467 XXYGSRIGLDRADRKRLFTLINDLPTVYEVVAGISKKKPKEKSAV 333
             +GSR G D+ADRKRLF++INDLPT++EVV G +KK+ KEKS+V
Sbjct: 107 FYFGSRFGFDKADRKRLFSMINDLPTIFEVVTGTAKKQVKEKSSV 151



 Score =  109 bits (273), Expect(2) = 3e-77
 Identities = 54/81 (66%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 TKSNTRGRGSESQGKYSK-MQXXXXXXXXXXXXXXXXXXDTLCGHCGGDYAADEFWICCD 65
           TKSN++ RGSESQGKYSK MQ                  +TLCG CG +YA+DEFWICCD
Sbjct: 159 TKSNSK-RGSESQGKYSKAMQAKDEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCD 217

Query: 64  ICEKWFHGKCVKITPARAEHI 2
           ICEKWFHGKCVKITPARAEHI
Sbjct: 218 ICEKWFHGKCVKITPARAEHI 238


>ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis]
           gi|223546532|gb|EEF48030.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 251

 Score =  208 bits (530), Expect(2) = 7e-77
 Identities = 103/165 (62%), Positives = 120/165 (72%)
 Frame = -3

Query: 827 YHPRSVDEVFVDFKARRTALIGALTTEAAEFYKLCDPEKENLCLYGYPNEQWEVNLPADE 648
           Y+PR+V+EVF DFK RR  +I ALTT+  EFY+ CDPEKENLCLYG+PNEQWEVNLPA+E
Sbjct: 7   YNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEVNLPAEE 66

Query: 647 VPPELPEPALGINFARDGMQEKDWLSLVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 468
           VPPELPEPALGINFARDGMQEKDWLSLVAV                              
Sbjct: 67  VPPELPEPALGINFARDGMQEKDWLSLVAV--------------------HSDAWLLAVA 106

Query: 467 XXYGSRIGLDRADRKRLFTLINDLPTVYEVVAGISKKKPKEKSAV 333
             +G+R G D+ADRKRLFT+INDLPT++EVV G +KK+ KEKS+V
Sbjct: 107 FYFGARFGFDKADRKRLFTMINDLPTIFEVVTGTAKKQAKEKSSV 151



 Score =  105 bits (263), Expect(2) = 7e-77
 Identities = 52/80 (65%), Positives = 57/80 (71%)
 Frame = -1

Query: 241 TKSNTRGRGSESQGKYSKMQXXXXXXXXXXXXXXXXXXDTLCGHCGGDYAADEFWICCDI 62
           +KS+++GRGSES GKYSK Q                   TLCG CG +YAADEFWICCDI
Sbjct: 159 SKSSSKGRGSES-GKYSKAQPKDEDEGLDEEDEEEHGD-TLCGACGENYAADEFWICCDI 216

Query: 61  CEKWFHGKCVKITPARAEHI 2
           CEKWFHGKCVKITPARAEHI
Sbjct: 217 CEKWFHGKCVKITPARAEHI 236


>ref|XP_002308535.1| predicted protein [Populus trichocarpa] gi|222854511|gb|EEE92058.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  206 bits (523), Expect(2) = 9e-77
 Identities = 103/165 (62%), Positives = 119/165 (72%)
 Frame = -3

Query: 827 YHPRSVDEVFVDFKARRTALIGALTTEAAEFYKLCDPEKENLCLYGYPNEQWEVNLPADE 648
           Y+PR+V+EVF DFK RR  +I ALTT+  EFY+ CDPEKENLCLYG+P+EQWEVNLPA+E
Sbjct: 7   YNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEE 66

Query: 647 VPPELPEPALGINFARDGMQEKDWLSLVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 468
           VPPELPEPALGINFARDGMQEKDWLSLVAV                              
Sbjct: 67  VPPELPEPALGINFARDGMQEKDWLSLVAV--------------------HSDAWLLSVS 106

Query: 467 XXYGSRIGLDRADRKRLFTLINDLPTVYEVVAGISKKKPKEKSAV 333
             +GSR G D+ADRKRLF +INDLPTV+EVV G +KK+ KEKS+V
Sbjct: 107 FYFGSRFGFDKADRKRLFNMINDLPTVFEVVTGTAKKQVKEKSSV 151



 Score =  108 bits (269), Expect(2) = 9e-77
 Identities = 53/81 (65%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 TKSNTRGRGSESQGKYSK-MQXXXXXXXXXXXXXXXXXXDTLCGHCGGDYAADEFWICCD 65
           TKSN++ RGSESQGK+SK MQ                  +TLCG CG +YA+DEFWICCD
Sbjct: 159 TKSNSK-RGSESQGKFSKVMQAKDEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCD 217

Query: 64  ICEKWFHGKCVKITPARAEHI 2
           ICEKWFHGKCVKITPARAEHI
Sbjct: 218 ICEKWFHGKCVKITPARAEHI 238


>ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 isoform 2 [Vitis
           vinifera]
          Length = 252

 Score =  203 bits (516), Expect(2) = 1e-75
 Identities = 101/165 (61%), Positives = 118/165 (71%)
 Frame = -3

Query: 827 YHPRSVDEVFVDFKARRTALIGALTTEAAEFYKLCDPEKENLCLYGYPNEQWEVNLPADE 648
           Y+PR+V+EVF DFK RR  +I ALTT+  EFY+ CDPEKENLCLYG+PNE WEVNLPA+E
Sbjct: 7   YNPRTVEEVFRDFKGRRAGMIKALTTDVDEFYQQCDPEKENLCLYGFPNELWEVNLPAEE 66

Query: 647 VPPELPEPALGINFARDGMQEKDWLSLVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 468
           VPPELPEPALGINFARDGMQEKDWLSLVAV                              
Sbjct: 67  VPPELPEPALGINFARDGMQEKDWLSLVAV--------------------HSDAWLLAVA 106

Query: 467 XXYGSRIGLDRADRKRLFTLINDLPTVYEVVAGISKKKPKEKSAV 333
             +G+R G D+ADRKRLF +INDLPT++EVV G +KK+ KEKS+V
Sbjct: 107 FYFGARFGFDKADRKRLFNMINDLPTIFEVVTGTAKKQVKEKSSV 151



 Score =  107 bits (267), Expect(2) = 1e-75
 Identities = 51/80 (63%), Positives = 56/80 (70%)
 Frame = -1

Query: 241 TKSNTRGRGSESQGKYSKMQXXXXXXXXXXXXXXXXXXDTLCGHCGGDYAADEFWICCDI 62
           +KSN++ RGSESQGKYSK                     TLCG CG +YA+DEFWICCDI
Sbjct: 159 SKSNSKVRGSESQGKYSKTPQKDEDEGLEEEEEDEHGE-TLCGACGENYASDEFWICCDI 217

Query: 61  CEKWFHGKCVKITPARAEHI 2
           CEKWFHGKCVKITPARAEHI
Sbjct: 218 CEKWFHGKCVKITPARAEHI 237


>ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [Vitis vinifera]
           gi|296081695|emb|CBI20700.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  203 bits (516), Expect(2) = 2e-75
 Identities = 100/165 (60%), Positives = 119/165 (72%)
 Frame = -3

Query: 827 YHPRSVDEVFVDFKARRTALIGALTTEAAEFYKLCDPEKENLCLYGYPNEQWEVNLPADE 648
           Y+PR+V+EVF DFK RR  +I ALTT+  EFY+ CDP+KENLCLYG+P+EQWEVNLPA+E
Sbjct: 7   YNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPDKENLCLYGFPSEQWEVNLPAEE 66

Query: 647 VPPELPEPALGINFARDGMQEKDWLSLVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 468
           VPPELPEPALGINFARDGMQEKDWLSLVAV                              
Sbjct: 67  VPPELPEPALGINFARDGMQEKDWLSLVAV--------------------HSDAWLLAVA 106

Query: 467 XXYGSRIGLDRADRKRLFTLINDLPTVYEVVAGISKKKPKEKSAV 333
             +G+R G D+ADRKRLF +INDLPT++EVV G +KK+ KEKS+V
Sbjct: 107 FYFGARFGFDKADRKRLFNMINDLPTIFEVVTGTAKKQVKEKSSV 151



 Score =  106 bits (265), Expect(2) = 2e-75
 Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 TKSNTRGRGSESQGKYSK-MQXXXXXXXXXXXXXXXXXXDTLCGHCGGDYAADEFWICCD 65
           +KSN++ RGSESQGKYSK +Q                  +TLCG CG +YA+DEFWICCD
Sbjct: 159 SKSNSK-RGSESQGKYSKPLQAKDEDEEGLEEEEEEEHGETLCGACGENYASDEFWICCD 217

Query: 64  ICEKWFHGKCVKITPARAEHI 2
           +CEKWFHGKCVKITPARAEHI
Sbjct: 218 VCEKWFHGKCVKITPARAEHI 238


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