BLASTX nr result

ID: Bupleurum21_contig00007040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007040
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518847.1| n-rich protein, putative [Ricinus communis] ...    58   9e-07
gb|ACU23341.1| unknown [Glycine max]                                   57   2e-06
ref|NP_001236375.1| N-rich protein [Glycine max] gi|57898928|emb...    57   2e-06
ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycin...    56   3e-06

>ref|XP_002518847.1| n-rich protein, putative [Ricinus communis]
           gi|223541834|gb|EEF43380.1| n-rich protein, putative
           [Ricinus communis]
          Length = 396

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
 Frame = +3

Query: 3   WSTSYGSKKPESRRNFDIRVGGGLNSN---------------SNDSVSGLANDAAKSNFN 137
           WS SYGSK+P+ RRNFDIRVGG +N++               ++D  +G     A  + N
Sbjct: 32  WSNSYGSKRPDERRNFDIRVGGEVNNSAPTATKLKGSDLNGLNDDWKTGAGTTVASPDLN 91

Query: 138 GFNHSWKLESSEIGSFGLNSNANG 209
           GFN +WK+     GS   +SN NG
Sbjct: 92  GFN-NWKM-----GSNVTSSNLNG 109


>gb|ACU23341.1| unknown [Glycine max]
          Length = 368

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 36/116 (31%)
 Frame = +3

Query: 3   WSTSYGSKKPESRRNFDIRVGGGLNSNSNDSVSGLANDAAKSNFNGFNHSWKLESS---- 170
           WS SY SK+P+ RRNFD++ G   N+N+N S         K+  + FN  WK+ +S    
Sbjct: 31  WSNSYSSKRPDQRRNFDVK-GSDFNNNNNSS---------KAFDDDFNDGWKITNSNGPL 80

Query: 171 ------------EIGSF--------------------GLNSNANGSFNKGVYSKPT 242
                       E+G F                     LN+NA G FNKG+YS  T
Sbjct: 81  FSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPNNLNNNAFGGFNKGIYSNTT 136


>ref|NP_001236375.1| N-rich protein [Glycine max] gi|57898928|emb|CAI44933.1| N-rich
           protein [Glycine max]
          Length = 368

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 36/116 (31%)
 Frame = +3

Query: 3   WSTSYGSKKPESRRNFDIRVGGGLNSNSNDSVSGLANDAAKSNFNGFNHSWKLESS---- 170
           WS SY SK+P+ RRNFD++ G   N+N+N S         K+  + FN  WK+ +S    
Sbjct: 31  WSNSYSSKRPDQRRNFDVK-GSDFNNNNNSS---------KAFDDDFNDGWKITNSNGPL 80

Query: 171 ------------EIGSF--------------------GLNSNANGSFNKGVYSKPT 242
                       E+G F                     LN+NA G FNKG+YS  T
Sbjct: 81  FSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPNNLNNNAFGGFNKGIYSNTT 136


>ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycine max]
           gi|255637142|gb|ACU18902.1| unknown [Glycine max]
          Length = 330

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 44/81 (54%)
 Frame = +3

Query: 3   WSTSYGSKKPESRRNFDIRVGGGLNSNSNDSVSGLANDAAKSNFNGFNHSWKLESSEIGS 182
           WS +Y SK+ + R NFDI+VGG +NS  +   +   ND    +     ++    ++ I  
Sbjct: 32  WSNNYISKRRDERINFDIKVGGEINSFKSKDPACDYNDNVNGSLLAMPYNNNNNNNIILG 91

Query: 183 FGLNSNANGSFNKGVYSKPTF 245
           FG     NG FNKG+YSKP F
Sbjct: 92  FG-GVGLNGGFNKGIYSKPAF 111


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