BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007033
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...   120   1e-25
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/125 (51%), Positives = 83/125 (66%)
 Frame = -1

Query: 377 ISLNLYHNFASTYIAVDNYIHNESSSNTLPPHKRNRQEWAKIVSTLVSNCTNLKELDHYY 198
           IS +L H+ A           + SS    PP  ++ Q+ AK  +T  SNCT L++L+  Y
Sbjct: 23  ISCHLNHSLA---------FFSASSDAQTPPLPQSAQDIAKWAATQSSNCTTLRDLNQIY 73

Query: 197 AHIIKTQMLSFYDAPFYWNNIIRSYTRINIPHKALCVYIAMARAGVGPDCYTLPIVLKAV 18
           AHII + +L FY APF+WNNIIRSYTR++ P KAL VYI+M+RAGV PD YTLPIVLKA 
Sbjct: 74  AHIICSDLLHFYSAPFHWNNIIRSYTRLDAPVKALQVYISMSRAGVLPDSYTLPIVLKAA 133

Query: 17  SQVLN 3
            Q+ +
Sbjct: 134 CQIFS 138


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/122 (49%), Positives = 81/122 (66%)
 Frame = -1

Query: 377 ISLNLYHNFASTYIAVDNYIHNESSSNTLPPHKRNRQEWAKIVSTLVSNCTNLKELDHYY 198
           IS +L +  A+T  +VD   + + +++  PP     Q+ A+ +++ +S C NL EL+   
Sbjct: 22  ISRHLCNYLATTTHSVDAQFNFQPTAH--PPSPDPIQDTAQTIASHLSKCANLIELNQLL 79

Query: 197 AHIIKTQMLSFYDAPFYWNNIIRSYTRINIPHKALCVYIAMARAGVGPDCYTLPIVLKAV 18
           AHII+T  L  Y APF WNNIIRSYTR+   H AL +YIAM+RAGV PD YT+PIVLKAV
Sbjct: 80  AHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYALSIYIAMSRAGVSPDSYTIPIVLKAV 139

Query: 17  SQ 12
            Q
Sbjct: 140 CQ 141


>ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|222832075|gb|EEE70552.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/88 (54%), Positives = 69/88 (78%)
 Frame = -1

Query: 275 NRQEWAKIVSTLVSNCTNLKELDHYYAHIIKTQMLSFYDAPFYWNNIIRSYTRINIPHKA 96
           + Q+ +K ++T +SNCT+L+EL+  YAH+I+T +L  Y APF+WNN+IR YTR+  P+KA
Sbjct: 1   SNQDPSKTIATQLSNCTSLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKA 60

Query: 95  LCVYIAMARAGVGPDCYTLPIVLKAVSQ 12
           L +Y++M+ AG+ PD YTLPIVLKA  Q
Sbjct: 61  LQIYVSMSHAGISPDNYTLPIVLKAACQ 88


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = -1

Query: 275 NRQEWAKIVSTLVSNCTNLKELDHYYAHIIKTQMLSFYDAPFYWNNIIRSYTRINIPHKA 96
           N  + A+IV+TL+ NCTN+ EL   +AH+++T ML  + + FYWN IIRSYTR+ +P  A
Sbjct: 189 NNVDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIA 248

Query: 95  LCVYIAMARAGVGPDCYTLPIVLKAVS 15
           L VYIAM +AG+ PDCYTLPIV KA+S
Sbjct: 249 LFVYIAMLQAGILPDCYTLPIVFKALS 275


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/87 (57%), Positives = 65/87 (74%)
 Frame = -1

Query: 275 NRQEWAKIVSTLVSNCTNLKELDHYYAHIIKTQMLSFYDAPFYWNNIIRSYTRINIPHKA 96
           N  + A+IV+TL+ NCTN+ EL   +AH+++T ML  + + FYWN IIRSYTR+ +P  A
Sbjct: 184 NNMDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIA 243

Query: 95  LCVYIAMARAGVGPDCYTLPIVLKAVS 15
           L VYI M RAG+ PDCYTLPIV KA+S
Sbjct: 244 LFVYIDMLRAGILPDCYTLPIVFKALS 270