BLASTX nr result

ID: Bupleurum21_contig00007032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007032
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   284   8e-75
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          281   5e-74
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   281   6e-74
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   265   3e-69
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]   219   2e-55

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  284 bits (726), Expect = 8e-75
 Identities = 139/185 (75%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   VILKMTSGKHLTLKNVLYVPDIRKNLVSGSLLNKHGFRIVIESDKVILSKSGMFVGKGYV 181
           VILKMTSGK LTL NVLYVP+IRKNLVSGSLLN HGFR+V  S+KV+LSKSGM+VGKGY+
Sbjct: 381 VILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYM 440

Query: 182 TDGLFKLNVMSVKDDNEIKNS-SAYLLESPNLWHARLGHVNYDTLRRLSMKEYIPKLNID 358
           +DG++KLNVM++   N  K S S Y+LES NLWH RLGHVNYDTLRRL    +IP   I+
Sbjct: 441 SDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQIN 500

Query: 359 SKHKCETCVEAKLTRSSFKRVERNTKLLDLIHSDICDLKFAPTRGGNKYFITFIDDCTKY 538
           S HKCETCVEAKLTRSSF+ VERNT+ LDLIHSDICDLKF  TRGGNKYFITF+DD TKY
Sbjct: 501 SNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKY 560

Query: 539 CYIYL 553
           CY+YL
Sbjct: 561 CYVYL 565


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  281 bits (719), Expect = 5e-74
 Identities = 136/185 (73%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   VILKMTSGKHLTLKNVLYVPDIRKNLVSGSLLNKHGFRIVIESDKVILSKSGMFVGKGYV 181
           V LKMTSGK LTL NVLYVP+IRKNLVSGSLLNKHGFR+V ESD V+LSK+GM+VGKGYV
Sbjct: 370 VALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYV 429

Query: 182 TDGLFKLNVMSVKDD-NEIKNSSAYLLESPNLWHARLGHVNYDTLRRLSMKEYIPKLNID 358
            DGLFKLNVM++K   N    SSAYLLES N+WH RLGHVN+++LR+L   ++IP   ID
Sbjct: 430 NDGLFKLNVMTLKPTINNKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQID 489

Query: 359 SKHKCETCVEAKLTRSSFKRVERNTKLLDLIHSDICDLKFAPTRGGNKYFITFIDDCTKY 538
            KHKC+TCVEAKLTRSSF+ ++RN++ LDLIHSDICD K   TRGGNKYFITFIDDCTKY
Sbjct: 490 LKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKY 549

Query: 539 CYIYL 553
           CY+YL
Sbjct: 550 CYVYL 554


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  281 bits (718), Expect = 6e-74
 Identities = 138/185 (74%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   VILKMTSGKHLTLKNVLYVPDIRKNLVSGSLLNKHGFRIVIESDKVILSKSGMFVGKGYV 181
           VILKMTSGK LTL NVLYVP+IRKNLV GSLLN HGFR+V ES+KV+LSKSGM+VGKGY+
Sbjct: 381 VILKMTSGKELTLTNVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYM 440

Query: 182 TDGLFKLNVMSVKDDNEIKNS-SAYLLESPNLWHARLGHVNYDTLRRLSMKEYIPKLNID 358
           +DG++KLNVM++   N  K S S Y+LES NLWH RL HVNYDTLRRL    +IP   I+
Sbjct: 441 SDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQIN 500

Query: 359 SKHKCETCVEAKLTRSSFKRVERNTKLLDLIHSDICDLKFAPTRGGNKYFITFIDDCTKY 538
           S HKCETCVEAKLTRSSF+ VERNT+ LDLIHSDICDLKF  TRGGNKYFITF+DD TKY
Sbjct: 501 SNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKY 560

Query: 539 CYIYL 553
           CY+YL
Sbjct: 561 CYVYL 565


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  265 bits (678), Expect = 3e-69
 Identities = 131/187 (70%), Positives = 155/187 (82%), Gaps = 3/187 (1%)
 Frame = +2

Query: 2    VILKMTSGKHLTLKNVLYVPDIRKNLVSGSLLNKHGFRIVIESDKVILSKSGMFVGKGYV 181
            VILKMTSGK LTL +VL+VPDI KNLVSGSLL+K+GF++V  SDK +L+K+ MFVGKGY+
Sbjct: 508  VILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYL 567

Query: 182  TDGLFKLNVMSV--KDDNEIK-NSSAYLLESPNLWHARLGHVNYDTLRRLSMKEYIPKLN 352
            +DGLFK+NVM+V  K  N  K +SSAYLL+S N+WH RLGHVNYDTL RL   +Y+PK N
Sbjct: 568  SDGLFKMNVMTVVPKSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFN 627

Query: 353  IDSKHKCETCVEAKLTRSSFKRVERNTKLLDLIHSDICDLKFAPTRGGNKYFITFIDDCT 532
            ID  HKCETCVE+KLT+  F  VER+T+ LDL HSDICDLKF  TRGG KYFITFIDDCT
Sbjct: 628  IDPNHKCETCVESKLTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKKYFITFIDDCT 687

Query: 533  KYCYIYL 553
            +YCY+YL
Sbjct: 688  RYCYVYL 694


>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
          Length = 487

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/191 (55%), Positives = 145/191 (75%), Gaps = 7/191 (3%)
 Frame = +2

Query: 2   VILKMTSGKHLTLKNVLYVPDIRKNLVSGSLLNKHGFRIVIESDKVILSKSGMFVGKGYV 181
           V+L  T GK LTL +VL+VP+IRKNLVS SLL+K GF++V ESDK++L+KSG FVGKGY+
Sbjct: 103 VVLNPTLGKKLTLMDVLFVPEIRKNLVSASLLSKKGFKLVFESDKLMLTKSGTFVGKGYM 162

Query: 182 TDGLFKLNVMSVKDDNEIKN-------SSAYLLESPNLWHARLGHVNYDTLRRLSMKEYI 340
           ++GLFK+NV +   DN I +       S AY++ES  LWH+RLGHVNY ++ +++    +
Sbjct: 163 SEGLFKINVFN---DNVIASTINKSFMSFAYIVESCELWHSRLGHVNYHSMYKMANLGLL 219

Query: 341 PKLNIDSKHKCETCVEAKLTRSSFKRVERNTKLLDLIHSDICDLKFAPTRGGNKYFITFI 520
            K +I+   KCE CVE+K  R  FK +ER+++LL+L+HSD+CDLK  PTRGG KYFITFI
Sbjct: 220 LKFDINETQKCEICVESKFARKPFKSIERSSELLELVHSDLCDLKMTPTRGGIKYFITFI 279

Query: 521 DDCTKYCYIYL 553
           DD +++CY+YL
Sbjct: 280 DDYSRFCYVYL 290


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