BLASTX nr result

ID: Bupleurum21_contig00007023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007023
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|2...   520   e-145
ref|XP_002283335.1| PREDICTED: GPN-loop GTPase 2-like [Vitis vin...   514   e-143
ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]   513   e-143
ref|XP_003527737.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]   507   e-141
emb|CAN72850.1| hypothetical protein VITISV_013941 [Vitis vinifera]   506   e-141

>ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|222860800|gb|EEE98342.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  520 bits (1338), Expect = e-145
 Identities = 256/297 (86%), Positives = 272/297 (91%)
 Frame = -3

Query: 1287 MVFGQVVIGPPGSGKTTYCNGMSQFLPLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 1108
            M FGQVVIGPPGSGKTTYCNGMSQFL LIGRKVAVINLDPANDALPY+CAVNIEDLIKLS
Sbjct: 1    MAFGQVVIGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDALPYDCAVNIEDLIKLS 60

Query: 1107 DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHDNAKS 928
            DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLH NAK+
Sbjct: 61   DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHSNAKN 120

Query: 927  VIMKLIKKLDLRLAAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXLPHINVLSKIDLIEN 748
            VIMKLIKKL LRL AVHLVDAHLCSDPGKYV              LPHINVLSKIDLIE+
Sbjct: 121  VIMKLIKKLSLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 747  YGKLGFNLDFYTDVEDLSYLQRLLNQDPRSAKYRKLTKELCDVIEDYSLVNFSTLDIQDK 568
            YGKL FNLDFYTDV+DLSYLQ  L+QDPR+AKYRKLTKELCDV++D+SLV+F+TLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQDQLDQDPRAAKYRKLTKELCDVVQDFSLVDFTTLDIQDK 240

Query: 567  ESVGNLVKLIDRCNGYIFAGIDASAAEFSKIAVGPVDFDYYRVAAVQEKYVKDDENF 397
            ESVGNLVKLIDR NGYIFAG+++SA EFSKIAV PVD+DYYRVAAVQEKY+KDDENF
Sbjct: 241  ESVGNLVKLIDRTNGYIFAGVESSAVEFSKIAVRPVDWDYYRVAAVQEKYMKDDENF 297


>ref|XP_002283335.1| PREDICTED: GPN-loop GTPase 2-like [Vitis vinifera]
          Length = 320

 Score =  514 bits (1323), Expect = e-143
 Identities = 255/309 (82%), Positives = 274/309 (88%)
 Frame = -3

Query: 1287 MVFGQVVIGPPGSGKTTYCNGMSQFLPLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 1108
            M +GQVVIGPPGSGKTTYC+GMSQFL LIGRKVAVINLDPANDALPYECAVNIEDLIKLS
Sbjct: 1    MAYGQVVIGPPGSGKTTYCDGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 60

Query: 1107 DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHDNAKS 928
            DVM EHSLGPNGGLVYCMDYLEKNIDWLQSKLEPL+KDHYLLFDFPGQVELFFLH NAK 
Sbjct: 61   DVMAEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLVKDHYLLFDFPGQVELFFLHSNAKK 120

Query: 927  VIMKLIKKLDLRLAAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXLPHINVLSKIDLIEN 748
            VIMKLIKKLDLRL AVHLVDAHLCSDPGKYV              LPHINVLSKIDLIE+
Sbjct: 121  VIMKLIKKLDLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 747  YGKLGFNLDFYTDVEDLSYLQRLLNQDPRSAKYRKLTKELCDVIEDYSLVNFSTLDIQDK 568
            YGKL FNLDFYTDV+DLS+L   L+QDPRS+KYRKLTKELC+VIEDYSLVNF+TLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSFLHYHLDQDPRSSKYRKLTKELCEVIEDYSLVNFTTLDIQDK 240

Query: 567  ESVGNLVKLIDRCNGYIFAGIDASAAEFSKIAVGPVDFDYYRVAAVQEKYVKDDENFDLN 388
            ESVGNLVKLID+ NGYIFAGI+ SA EFSKIA GP+D+DYYRVAAVQEKY+KD+ENF   
Sbjct: 241  ESVGNLVKLIDKSNGYIFAGIEGSAVEFSKIAAGPLDWDYYRVAAVQEKYMKDEENFIKK 300

Query: 387  D*SSGIHLQ 361
              ++  H+Q
Sbjct: 301  SSNTRQHIQ 309


>ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]
          Length = 301

 Score =  513 bits (1322), Expect = e-143
 Identities = 250/301 (83%), Positives = 275/301 (91%)
 Frame = -3

Query: 1287 MVFGQVVIGPPGSGKTTYCNGMSQFLPLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 1108
            MVFGQVV+GPPGSGKTTYCNGMSQFL LIGRKVAVINLDPAND+LPYECAVNIEDL+KLS
Sbjct: 1    MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLS 60

Query: 1107 DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHDNAKS 928
            DVM EHSLGPNGGLVYCMDYLEKNIDWL++KLEPLLKDHYLLFDFPGQVELFFLH +AK+
Sbjct: 61   DVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKN 120

Query: 927  VIMKLIKKLDLRLAAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXLPHINVLSKIDLIEN 748
            VI+KLIKKL+LRL AVHL+DAHLCSDPGKY+              LPHINVLSKIDLIE+
Sbjct: 121  VILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIES 180

Query: 747  YGKLGFNLDFYTDVEDLSYLQRLLNQDPRSAKYRKLTKELCDVIEDYSLVNFSTLDIQDK 568
            YGKL FNLDFYTDV+DLSYLQ  L+QDPRSAKYRKLTKELCD+IE++SLV+FSTLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQHHLDQDPRSAKYRKLTKELCDIIENFSLVSFSTLDIQDK 240

Query: 567  ESVGNLVKLIDRCNGYIFAGIDASAAEFSKIAVGPVDFDYYRVAAVQEKYVKDDENFDLN 388
            ESVGNLVKLID+ NGYIF G++ASA EFSKIAVGPV++DYYRVAAVQEKY+KDDEN D N
Sbjct: 241  ESVGNLVKLIDKSNGYIFVGMEASAVEFSKIAVGPVNWDYYRVAAVQEKYMKDDENIDDN 300

Query: 387  D 385
            +
Sbjct: 301  E 301


>ref|XP_003527737.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]
          Length = 297

 Score =  507 bits (1305), Expect = e-141
 Identities = 246/296 (83%), Positives = 271/296 (91%)
 Frame = -3

Query: 1287 MVFGQVVIGPPGSGKTTYCNGMSQFLPLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 1108
            MVFGQ+V+GPPGSGKTTYCNGMSQFL LIGRKVAVINLDPAND+LPY+CAVNIEDL+KLS
Sbjct: 1    MVFGQIVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYDCAVNIEDLVKLS 60

Query: 1107 DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHDNAKS 928
            DVM EHSLGPNGGLVYCMDYLEKNIDWL++KLEPLLKDHYLLFDFPGQVELFFLH +AK+
Sbjct: 61   DVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKN 120

Query: 927  VIMKLIKKLDLRLAAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXLPHINVLSKIDLIEN 748
            VI+KLIKKL+LRL AVHL+DAHLCSDPGKY+              LPHINVLSKIDLIE+
Sbjct: 121  VILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 747  YGKLGFNLDFYTDVEDLSYLQRLLNQDPRSAKYRKLTKELCDVIEDYSLVNFSTLDIQDK 568
            YGKL FNLDFYTDV+DLSYLQ  L+QDPRSAKYRKLTKELCDVIE++SLV+FSTLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIENFSLVSFSTLDIQDK 240

Query: 567  ESVGNLVKLIDRCNGYIFAGIDASAAEFSKIAVGPVDFDYYRVAAVQEKYVKDDEN 400
            ESVGNLVKLID+ NGYIF G++ SA EFSKIAVGPVD+DYYRVAAVQEKY+KDD+N
Sbjct: 241  ESVGNLVKLIDKSNGYIFVGMETSAVEFSKIAVGPVDWDYYRVAAVQEKYMKDDDN 296


>emb|CAN72850.1| hypothetical protein VITISV_013941 [Vitis vinifera]
          Length = 320

 Score =  506 bits (1304), Expect = e-141
 Identities = 253/302 (83%), Positives = 269/302 (89%), Gaps = 5/302 (1%)
 Frame = -3

Query: 1287 MVFGQVVIGPPGSGKTTYCNGMSQFLPLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 1108
            M +GQVVIGPPGSGKTTYC+GMSQFL LIGRKVAVINLDPANDALPYECAVNIEDLIKLS
Sbjct: 1    MAYGQVVIGPPGSGKTTYCDGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 60

Query: 1107 DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHDNAKS 928
            DVM EHSLGPNGGLVYCMDYLEKNIDWLQSKLEPL+KDHYLLFDFPGQVELFFLH NAK 
Sbjct: 61   DVMAEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLVKDHYLLFDFPGQVELFFLHSNAKK 120

Query: 927  VIMKLIKKLDLRLAAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXLPHINVLSKIDLIEN 748
            VIMKLIKKLDLRL AVHLVDAHLCSDPGKYV              LPHINVLSKIDLIE+
Sbjct: 121  VIMKLIKKLDLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 747  YGKLGFNLDFYTDVEDLSYLQRLLNQDPRSAKYRKLTKELCDVIEDYSLVNFSTLDIQDK 568
            YGKL FNLDFYTDV+DLS+L   L+QDPRS+KYRKLTKELC+VIEDYSLVNF+TLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSFLHYHLDQDPRSSKYRKLTKELCEVIEDYSLVNFTTLDIQDK 240

Query: 567  ESVGNLVKLIDRCNGYIFAGIDASAAEFSKIAVGPVDFDYYR-----VAAVQEKYVKDDE 403
            ESVGNLVKLID+ NGYIFAGI+ SA EFSKIA GP+D+DYYR     VAAVQEKY+KD+E
Sbjct: 241  ESVGNLVKLIDKSNGYIFAGIEGSAVEFSKIAAGPLDWDYYRYPFLMVAAVQEKYMKDEE 300

Query: 402  NF 397
            NF
Sbjct: 301  NF 302


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