BLASTX nr result

ID: Bupleurum21_contig00007002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007002
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW58868.1| hypothetical protein ZEAMMB73_850141 [Zea mays]         67   2e-09
ref|NP_001131740.1| uncharacterized protein LOC100193106 [Zea ma...    67   2e-09
ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleo...    66   3e-09
tpg|DAA36915.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea m...    66   3e-09
ref|XP_003565149.1| PREDICTED: probable small nuclear ribonucleo...    66   3e-09

>gb|AFW58868.1| hypothetical protein ZEAMMB73_850141 [Zea mays]
          Length = 104

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 540 NKKLLGRVRAFDRHCNMVLENVREMWTELP 451
           NKKLLGRVRAFDRHCNMVLENVREMWTE+P
Sbjct: 39  NKKLLGRVRAFDRHCNMVLENVREMWTEIP 68


>ref|NP_001131740.1| uncharacterized protein LOC100193106 [Zea mays]
           gi|194692396|gb|ACF80282.1| unknown [Zea mays]
           gi|195629728|gb|ACG36505.1| small nuclear
           ribonucleoprotein Sm D2 [Zea mays]
           gi|413918934|gb|AFW58866.1| Small nuclear
           ribonucleoprotein Sm D2 isoform 1 [Zea mays]
           gi|413918935|gb|AFW58867.1| Small nuclear
           ribonucleoprotein Sm D2 isoform 2 [Zea mays]
          Length = 105

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 540 NKKLLGRVRAFDRHCNMVLENVREMWTELP 451
           NKKLLGRVRAFDRHCNMVLENVREMWTE+P
Sbjct: 40  NKKLLGRVRAFDRHCNMVLENVREMWTEIP 69


>ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Cucumis sativus] gi|449499984|ref|XP_004160970.1|
           PREDICTED: probable small nuclear ribonucleoprotein Sm
           D2-like [Cucumis sativus]
          Length = 107

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 540 NKKLLGRVRAFDRHCNMVLENVREMWTELP 451
           NKKLLGRVRAFDRHCNMVLENVREMWTE+P
Sbjct: 42  NKKLLGRVRAFDRHCNMVLENVREMWTEVP 71


>tpg|DAA36915.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea mays]
          Length = 102

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 540 NKKLLGRVRAFDRHCNMVLENVREMWTELP 451
           NKKLLGRVRAFDRHCNMVLENVREMWTE+P
Sbjct: 37  NKKLLGRVRAFDRHCNMVLENVREMWTEVP 66


>ref|XP_003565149.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           isoform 1 [Brachypodium distachyon]
           gi|357126950|ref|XP_003565150.1| PREDICTED: probable
           small nuclear ribonucleoprotein Sm D2-like isoform 2
           [Brachypodium distachyon]
          Length = 105

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 540 NKKLLGRVRAFDRHCNMVLENVREMWTELP 451
           NKKLLGRVRAFDRHCNMVLENVREMWTE+P
Sbjct: 40  NKKLLGRVRAFDRHCNMVLENVREMWTEVP 69


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