BLASTX nr result

ID: Bupleurum21_contig00007001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007001
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302713.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-31
ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin...    94   2e-31
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...    96   4e-31
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...    96   5e-31
gb|ACJ86019.1| unknown [Medicago truncatula]                           96   5e-31

>ref|XP_002302713.1| predicted protein [Populus trichocarpa]
           gi|224128478|ref|XP_002320342.1| predicted protein
           [Populus trichocarpa] gi|118481477|gb|ABK92681.1|
           unknown [Populus trichocarpa]
           gi|222844439|gb|EEE81986.1| predicted protein [Populus
           trichocarpa] gi|222861115|gb|EEE98657.1| predicted
           protein [Populus trichocarpa]
          Length = 108

 Score = 97.4 bits (241), Expect(2) = 1e-31
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = +2

Query: 20  MSRPMDEDAPAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 166
           MSRPM+EDAP+KNEEEEF+TGPLSVLMMSVKNNTQVLINCRNNKKLLGR
Sbjct: 1   MSRPMEEDAPSKNEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 49



 Score = 64.7 bits (156), Expect(2) = 1e-31
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 285 KGKKKSLPVNKDRFISKMFLRGDSVIIVLRNPK 383
           KGKKK+ PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 76  KGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
           gi|255629692|gb|ACU15195.1| unknown [Glycine max]
          Length = 117

 Score = 94.4 bits (233), Expect(2) = 2e-31
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = +2

Query: 20  MSRPMDEDAPAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 166
           MSRPM+ED   KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR
Sbjct: 1   MSRPMEEDTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 49



 Score = 67.0 bits (162), Expect(2) = 2e-31
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 285 KGKKKSLPVNKDRFISKMFLRGDSVIIVLRNPK*DN 392
           KGKKKS PVNKDRFISKMFLRGDSVIIVLRNPK D+
Sbjct: 76  KGKKKSQPVNKDRFISKMFLRGDSVIIVLRNPKWDS 111


>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score = 95.9 bits (237), Expect(2) = 4e-31
 Identities = 46/49 (93%), Positives = 47/49 (95%)
 Frame = +2

Query: 20  MSRPMDEDAPAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 166
           MSRPM+EDA  KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR
Sbjct: 1   MSRPMEEDAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 49



 Score = 64.7 bits (156), Expect(2) = 4e-31
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 285 KGKKKSLPVNKDRFISKMFLRGDSVIIVLRNPK 383
           KGKKK+ PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 76  KGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525009|gb|AET05463.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
           gi|388506390|gb|AFK41261.1| unknown [Medicago
           truncatula]
          Length = 108

 Score = 95.5 bits (236), Expect(2) = 5e-31
 Identities = 46/49 (93%), Positives = 47/49 (95%)
 Frame = +2

Query: 20  MSRPMDEDAPAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 166
           MSRPM+EDA  KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR
Sbjct: 1   MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 49



 Score = 64.7 bits (156), Expect(2) = 5e-31
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 285 KGKKKSLPVNKDRFISKMFLRGDSVIIVLRNPK 383
           KGKKK+ PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 76  KGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>gb|ACJ86019.1| unknown [Medicago truncatula]
          Length = 108

 Score = 95.5 bits (236), Expect(2) = 5e-31
 Identities = 46/49 (93%), Positives = 47/49 (95%)
 Frame = +2

Query: 20  MSRPMDEDAPAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 166
           MSRPM+EDA  KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR
Sbjct: 1   MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGR 49



 Score = 64.7 bits (156), Expect(2) = 5e-31
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 285 KGKKKSLPVNKDRFISKMFLRGDSVIIVLRNPK 383
           KGKKK+ PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 76  KGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


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