BLASTX nr result
ID: Bupleurum21_contig00006907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00006907
(2685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 854 0.0
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 854 0.0
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 761 0.0
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 761 0.0
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 757 0.0
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 854 bits (2207), Expect(2) = 0.0
Identities = 470/852 (55%), Positives = 582/852 (68%), Gaps = 41/852 (4%)
Frame = +1
Query: 7 IFSAGRNSSSKNL----SRKISRVDSY-HIQPVFPAVWKPKPLWTGKQVITSLLNHITQG 171
++S+G +S S + +K+S +DS +QP+ PA+WKP+PLW+GKQVIT++LNHIT+G
Sbjct: 738 LYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRG 797
Query: 172 CKPCSLEIEGKIPYQYFSRD-------------SSNNKPNKTDEATAENKLLIRKNELVR 312
KP + E +GKIP +YF + S K + ++ E KLLI KNELVR
Sbjct: 798 RKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVR 857
Query: 313 GVIDKAQFGKYGLVHTVQELYGSNTAGILLSALSRLFTCFLQMHGFTCGVDDLILLPQYD 492
GVIDKAQF KYGLVH VQELYGSNTAGILLS LSRLFT FLQMHGFTCGVDDL++ P YD
Sbjct: 858 GVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYD 917
Query: 493 IKRKXXXXXXXXXXXX-HCDFVNFKRGKIGPKELQLEVEKVIRNNGDSAIARLDGKMKNE 669
I RK HC F+ GKI P +LQ+EVEK+I +NG++AI RLD MKNE
Sbjct: 918 IARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNE 977
Query: 670 LREKGSKINKELLLNGLYKPFPKNCISLMTISGAKGSTVNFQQISSSLGQQELEGKRVPR 849
L E SK+NK+LLL GL KPFPKNC+SLMT +GAKGSTVNF QISS LGQQ+LEGKRVPR
Sbjct: 978 LNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPR 1037
Query: 850 MTSGKTLPSFSPWDFSSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL 1029
M SGKTLP F PWD ++RAGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYL
Sbjct: 1038 MVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYL 1097
Query: 1030 QRCLVKNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHHTSFLNKFEALAKNQEIIDQK 1209
QRCL+KNLECLKVCYDYTVRD+DGSIVQF YG+DGVDVH TSF+ +FEALA N+E++ +K
Sbjct: 1098 QRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEK 1157
Query: 1210 FHHELEYNTYIKKLPSKLEERVDKLTEISVKGKMTFEGXXXXXXXXXXXXX-YLSSLAQP 1386
F + ++N YI+KLP +L ++ K E ++ + F+ Y+SSLAQP
Sbjct: 1158 FGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQP 1217
Query: 1387 GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASSDIKTPIVTCR 1566
GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++DIKTPI+TC
Sbjct: 1218 GEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCP 1277
Query: 1567 LLEGKSKDEXXXXXXXXXXXXXXDITESVEICVIPLSIKKGKIYRIYKLKMKVKKQEV-- 1740
L G+SKD+ DITES+E+ ++P +++ + IYKLKMK+ + +
Sbjct: 1278 LQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYP 1337
Query: 1741 ----VSEEDCQKTLETMFLRELEDAIENHIKSLSRISGIKDFKKDVLSSNASEIGEDVSG 1908
+S EDC++TLE +F+RELEDAI+NH+ LS+ISGIK+F D S + E ED SG
Sbjct: 1338 PHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG 1397
Query: 1909 SKXXXXXXXXXXXXXXXXXXXN-------RKQQAXXXXXXXXXXXXXTNEVEPLTELVGE 2067
+ RKQQA +E EP L E
Sbjct: 1398 DGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEP-DEGEPSAGLTEE 1456
Query: 2068 IDQVVDEITSEIGHSEDDESSNMSCDEGFEPT----STNNKVKAESKKKAQEFRLSPKDT 2235
ID V DE+ EI ++E+ S+ ++ P+ S N K K E+K+K + FR KD
Sbjct: 1457 IDLVEDEV--EISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRK-KRFRAIKKDF 1513
Query: 2236 DRSCFVKTEGRDFEVHFRFVDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKN 2415
DR+ VK +G FEVHFRF +EPHILL+QI QKAA KV ++ SGKI+ CQ V++ N
Sbjct: 1514 DRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQ-----VIDCN 1568
Query: 2416 K----FYGRRMK 2439
K +YGR K
Sbjct: 1569 KDQVIYYGRDPK 1580
Score = 89.0 bits (219), Expect(2) = 0.0
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 2451 KKSTEAKKDLSKLCALKAAGTNITAFWEIQDILDVNYIYSNNISLMLKTYGIEVARKTII 2630
K+ ++ KL AL+ AG + TAFW++QD LDV Y+YSNN+ ML T+G+E AR TII
Sbjct: 1581 KRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATII 1640
Query: 2631 KEVQDVFKIYGVEIDYRH 2684
KEV +VF YGV+++ RH
Sbjct: 1641 KEVFNVFNAYGVKVNIRH 1658
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 854 bits (2207), Expect(2) = 0.0
Identities = 470/852 (55%), Positives = 582/852 (68%), Gaps = 41/852 (4%)
Frame = +1
Query: 7 IFSAGRNSSSKNL----SRKISRVDSY-HIQPVFPAVWKPKPLWTGKQVITSLLNHITQG 171
++S+G +S S + +K+S +DS +QP+ PA+WKP+PLW+GKQVIT++LNHIT+G
Sbjct: 667 LYSSGLSSGSGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRG 726
Query: 172 CKPCSLEIEGKIPYQYFSRD-------------SSNNKPNKTDEATAENKLLIRKNELVR 312
KP + E +GKIP +YF + S K + ++ E KLLI KNELVR
Sbjct: 727 RKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVR 786
Query: 313 GVIDKAQFGKYGLVHTVQELYGSNTAGILLSALSRLFTCFLQMHGFTCGVDDLILLPQYD 492
GVIDKAQF KYGLVH VQELYGSNTAGILLS LSRLFT FLQMHGFTCGVDDL++ P YD
Sbjct: 787 GVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYD 846
Query: 493 IKRKXXXXXXXXXXXX-HCDFVNFKRGKIGPKELQLEVEKVIRNNGDSAIARLDGKMKNE 669
I RK HC F+ GKI P +LQ+EVEK+I +NG++AI RLD MKNE
Sbjct: 847 IARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNE 906
Query: 670 LREKGSKINKELLLNGLYKPFPKNCISLMTISGAKGSTVNFQQISSSLGQQELEGKRVPR 849
L E SK+NK+LLL GL KPFPKNC+SLMT +GAKGSTVNF QISS LGQQ+LEGKRVPR
Sbjct: 907 LNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPR 966
Query: 850 MTSGKTLPSFSPWDFSSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL 1029
M SGKTLP F PWD ++RAGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYL
Sbjct: 967 MVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYL 1026
Query: 1030 QRCLVKNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHHTSFLNKFEALAKNQEIIDQK 1209
QRCL+KNLECLKVCYDYTVRD+DGSIVQF YG+DGVDVH TSF+ +FEALA N+E++ +K
Sbjct: 1027 QRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEK 1086
Query: 1210 FHHELEYNTYIKKLPSKLEERVDKLTEISVKGKMTFEGXXXXXXXXXXXXX-YLSSLAQP 1386
F + ++N YI+KLP +L ++ K E ++ + F+ Y+SSLAQP
Sbjct: 1087 FGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQP 1146
Query: 1387 GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASSDIKTPIVTCR 1566
GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++DIKTPI+TC
Sbjct: 1147 GEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCP 1206
Query: 1567 LLEGKSKDEXXXXXXXXXXXXXXDITESVEICVIPLSIKKGKIYRIYKLKMKVKKQEV-- 1740
L G+SKD+ DITES+E+ ++P +++ + IYKLKMK+ + +
Sbjct: 1207 LQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYP 1266
Query: 1741 ----VSEEDCQKTLETMFLRELEDAIENHIKSLSRISGIKDFKKDVLSSNASEIGEDVSG 1908
+S EDC++TLE +F+RELEDAI+NH+ LS+ISGIK+F D S + E ED SG
Sbjct: 1267 PHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG 1326
Query: 1909 SKXXXXXXXXXXXXXXXXXXXN-------RKQQAXXXXXXXXXXXXXTNEVEPLTELVGE 2067
+ RKQQA +E EP L E
Sbjct: 1327 DGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEP-DEGEPSAGLTEE 1385
Query: 2068 IDQVVDEITSEIGHSEDDESSNMSCDEGFEPT----STNNKVKAESKKKAQEFRLSPKDT 2235
ID V DE+ EI ++E+ S+ ++ P+ S N K K E+K+K + FR KD
Sbjct: 1386 IDLVEDEV--EISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRK-KRFRAIKKDF 1442
Query: 2236 DRSCFVKTEGRDFEVHFRFVDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKN 2415
DR+ VK +G FEVHFRF +EPHILL+QI QKAA KV ++ SGKI+ CQ V++ N
Sbjct: 1443 DRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQ-----VIDCN 1497
Query: 2416 K----FYGRRMK 2439
K +YGR K
Sbjct: 1498 KDQVIYYGRDPK 1509
Score = 89.0 bits (219), Expect(2) = 0.0
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 2451 KKSTEAKKDLSKLCALKAAGTNITAFWEIQDILDVNYIYSNNISLMLKTYGIEVARKTII 2630
K+ ++ KL AL+ AG + TAFW++QD LDV Y+YSNN+ ML T+G+E AR TII
Sbjct: 1510 KRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATII 1569
Query: 2631 KEVQDVFKIYGVEIDYRH 2684
KEV +VF YGV+++ RH
Sbjct: 1570 KEVFNVFNAYGVKVNIRH 1587
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 761 bits (1966), Expect(2) = 0.0
Identities = 439/841 (52%), Positives = 544/841 (64%), Gaps = 46/841 (5%)
Frame = +1
Query: 1 SGIFSAGRNSSSKNLSRKI--SRVDSYHIQPVFPAVWKPKPLWTGKQVITSLLNHITQGC 174
SG+ + G NS +K+ SR + IQ + PA+WKPKPLWTGKQVIT++LNHIT
Sbjct: 670 SGVSTVGPNSFHGRPGQKVLWSRSED-EIQTLPPAIWKPKPLWTGKQVITAILNHITSDH 728
Query: 175 KPCSLEIEGKIPYQYFSRDSSNNKPNKTDEATA---------ENKLLIRKNELVRGVIDK 327
P ++E + KIP +F ++ +KP + +++ E K+L+ KNELVRGVIDK
Sbjct: 729 PPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDK 788
Query: 328 AQFGKYGLVHTVQELYGSNTAGILLSALSRLFTCFLQMHGFTCGVDDLILLPQYDIKRKX 507
QFG+YGLVHTV EL GS+TAGILLS LSRLFT +LQMHGFTCGVDDL++L D +RK
Sbjct: 789 GQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKK 848
Query: 508 XXXXXXXXXXX-HCDFVNFK--RGKIGPKELQLEVEKVIRNNGDSAIARLDGKMKNELRE 678
H +F+ K + KI P +QL +EK IR++GDSA+A LD +M NEL
Sbjct: 849 QLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGDSALAYLDRQMSNELNT 908
Query: 679 KGSK-INKELLLNGLYKPFPKNCISLMTISGAKGSTVNFQQISSSLGQQELEGKRVPRMT 855
K S + LL +GL KP KNCISLMT SGAKGS VNFQQISS LGQQELEGKRVPRM
Sbjct: 909 KTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMV 968
Query: 856 SGKTLPSFSPWDFSSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1035
SGKTLP F PWD+++R+GG+ITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR
Sbjct: 969 SGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1028
Query: 1036 CLVKNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHHTSFLNKFEALAKNQEIIDQKFH 1215
CL+KNLECLK+ YD+TVRDADGS+VQF YGEDGVDVH TSF+ KF+ LA NQ++I ++
Sbjct: 1029 CLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSG 1088
Query: 1216 HEL-EYNTYIKKLPSKLEERVDK-LTEISVKGKMTFEGXXXXXXXXXXXXXYLSSLAQPG 1389
+L +N+YI +LP L+E+ D+ L + S+ G++ +L SLAQPG
Sbjct: 1089 GQLGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKREDLYNLMKQKFLLSLAQPG 1148
Query: 1390 EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASSDIKTPIVTCRL 1569
EPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS DIKTPI+TC L
Sbjct: 1149 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPL 1208
Query: 1570 LEGKSKDEXXXXXXXXXXXXXXDITESVEICVIPLSIKKGKIYRIYKLKMKV------KK 1731
EG++ ++ DI ES+E+ V+P +I+ G + RIYKLKMK+ +
Sbjct: 1209 QEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQ 1268
Query: 1732 QEVVSEEDCQKTLETMFLRELEDAIENHIKSLSRISGIKDFKKDVLSSNASEIGEDVSGS 1911
+S ED ++TLE +FLRELEDAI+NH+ LSRISGIKDF + S + E EDV+G
Sbjct: 1269 YANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGD 1328
Query: 1912 KXXXXXXXXXXXXXXXXXXXN-------RKQQAXXXXXXXXXXXXXTNEVEPLTE----- 2055
+ RK QA NE E
Sbjct: 1329 MSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESG 1388
Query: 2056 LVGEIDQVVDEITSEIGHSEDDESSN----------MSCDEGFEPTSTNNKVKAESKK-K 2202
EIDQ +E D+E+S S + E S K K + KK K
Sbjct: 1389 FESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPK 1448
Query: 2203 AQEFRLSPKDTDRSCFVKTEGRDFEVHFRFVDEPHILLSQIVQKAAKKVPLKGSGKIEHC 2382
A+ KD DR+ FV+ FEVHF+F +EPHILL++I QK AKKV ++ GKIE C
Sbjct: 1449 AKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQC 1508
Query: 2383 Q 2385
+
Sbjct: 1509 R 1509
Score = 88.2 bits (217), Expect(2) = 0.0
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 2451 KKSTEAKKDLS-KLCALKAAGTNITAFWEIQDILDVNYIYSNNISLMLKTYGIEVARKTI 2627
K+ + K D+ K+ AL A G + FW++QD LDV YIYSNNI MLKTYG+E AR+TI
Sbjct: 1526 KERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETI 1585
Query: 2628 IKEVQDVFKIYGVEIDYRH 2684
I+E+ VFK YG+ + RH
Sbjct: 1586 IREINHVFKSYGIAVSNRH 1604
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 761 bits (1965), Expect(2) = 0.0
Identities = 444/839 (52%), Positives = 541/839 (64%), Gaps = 41/839 (4%)
Frame = +1
Query: 1 SGIFSAGRNSSSKNLSRKISRVD-SYHIQPVFPAVWKPKPLWTGKQVITSLLNHITQGCK 177
SGI ++ +SS+ +KI +D + PV PAVWKP+PLWTGKQV+T+LL+HITQG
Sbjct: 655 SGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSP 714
Query: 178 PCSLEIEGKIPYQYFSRDSSNNKPN---KTDEATA----ENKLLIRKNELVRGVIDKAQF 336
P +E + KIP + D N+K K D+ A ++ LLI KNELVRGVIDKAQF
Sbjct: 715 PFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQF 774
Query: 337 GKYGLVHTVQELYGSNTAGILLSALSRLFTCFLQMHGFTCGVDDLILLPQYDIKR-KXXX 513
G YGLVHTVQELYGSNTAG+LLS +SRLFT FLQ HGFTCGVDDL+L+ D +R K
Sbjct: 775 GDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQ 834
Query: 514 XXXXXXXXXHCDFVNFKRG-KIGPKELQLEVEKVIRNNGDSAIARLDGKMKNELREK--G 684
H F+ K G K+ P LQL +EK I NG++A+ LD KM ++L E+
Sbjct: 835 ICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGN 894
Query: 685 SKINKELLLNGLYKPFPKNCISLMTISGAKGSTVNFQQISSSLGQQELEGKRVPRMTSGK 864
SK+ K+LL GL KP KNCISLMT SGAKG T NFQQISS LGQQ+LEGKRVPRM SGK
Sbjct: 895 SKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGK 954
Query: 865 TLPSFSPWDFSSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLV 1044
TLP F PWD++SRAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+
Sbjct: 955 TLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLI 1014
Query: 1045 KNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHHTSFLNKFEALAKNQEIIDQKFHHEL 1224
KNLE LK+CYD+TVRDADGS++QF YGEDGVDVH T+F+ KFEALA NQ+++ + HH+L
Sbjct: 1015 KNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQL 1074
Query: 1225 -EYNTYIKKLPSKLEER----VDKLTEISVKGKMTFEGXXXXXXXXXXXXXYLSSLAQPG 1389
+YN +I +LPS L E+ + L++ V G + E YLSSLAQPG
Sbjct: 1075 GKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKE-----DFIRLLENKYLSSLAQPG 1129
Query: 1390 EPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASSDIKTPIVTCRL 1569
EPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTAS DIKTPI+TC L
Sbjct: 1130 EPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL 1189
Query: 1570 LEGKSKDEXXXXXXXXXXXXXXDITESVEICVIPLSIKKGKIYRIYKLKMKVKKQE---- 1737
EG S D DI ES+ + V+P S +K +I IYKL++ E
Sbjct: 1190 KEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQ 1249
Query: 1738 --VVSEEDCQKTLETMFLRELEDAIENHIKSLSRISGIKDFKKDVLSSNASEIGEDVSGS 1911
+S ED + TLET+FL ELE IE + LS+I+GIK F D S +SE G++VS S
Sbjct: 1250 HGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSE-GDEVSSS 1308
Query: 1912 K-----XXXXXXXXXXXXXXXXXXXNRKQQAXXXXXXXXXXXXXTNEVEPLTELVGEIDQ 2076
+ +K QA N E T E+DQ
Sbjct: 1309 RQEEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQ 1368
Query: 2077 -------------VVDEITSEIGHSEDDESSNMSCDEGFEPTSTNNKVKAESKKKAQEFR 2217
+V + SE D S +MS ++ E + KVK+E
Sbjct: 1369 GDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSE--------- 1419
Query: 2218 LSPKDTDRSCFVKTEGRDFEVHFRFVDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLS 2394
L K+TDRS FV+ + FEVHF+F +EPH LLSQIVQ+AA+KV ++ SGKI CQQ++
Sbjct: 1420 LVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQIT 1478
Score = 82.4 bits (202), Expect(2) = 0.0
Identities = 35/71 (49%), Positives = 52/71 (73%)
Frame = +3
Query: 2472 KDLSKLCALKAAGTNITAFWEIQDILDVNYIYSNNISLMLKTYGIEVARKTIIKEVQDVF 2651
++ K+ AL+ +G + WE+QD LDV YIYSN+I ML+TYG+E AR TII+E+Q++F
Sbjct: 1500 EEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIF 1559
Query: 2652 KIYGVEIDYRH 2684
YG+ ++ RH
Sbjct: 1560 TSYGISVNIRH 1570
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 757 bits (1954), Expect(2) = 0.0
Identities = 441/843 (52%), Positives = 538/843 (63%), Gaps = 45/843 (5%)
Frame = +1
Query: 1 SGIFSAGRNSSSKNLSRKISRVD-SYHIQPVFPAVWKPKPLWTGKQVITSLLNHITQGCK 177
SGI ++ +SS+ +KI +D + PV PAVWKP+PLWTGKQV+T+LL+HITQG
Sbjct: 649 SGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSP 708
Query: 178 PCSLEIEGKIPYQYFS-RDSSNNKPNKTDEATAE---------NKLLIRKNELVRGVIDK 327
P +E + KIP +F RD NN K + + + LLI KNELVRGVIDK
Sbjct: 709 PFFVEKDVKIPRGFFKCRDMGNNSSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDK 768
Query: 328 AQFGKYGLVHTVQELYGSNTAGILLSALSRLFTCFLQMHGFTCGVDDLILLPQYDIKR-K 504
AQFG YGLVHTVQELYGSNTAG+LLS +SRLFT FLQ HGFTCGVDDL+L+ D +R K
Sbjct: 769 AQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREK 828
Query: 505 XXXXXXXXXXXXHCDFVNFKRG-KIGPKELQLEVEKVIRNNGDSAIARLDGKMKNELREK 681
H F+ K G K+ P LQL +EK I NG++A+ LD KM ++L E+
Sbjct: 829 QLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNER 888
Query: 682 --GSKINKELLLNGLYKPFPKNCISLMTISGAKGSTVNFQQISSSLGQQELEGKRVPRMT 855
SK+ K+LL GL KP KNCISLMT SGAKG T NFQQISS LGQQ+LEGKRVPRM
Sbjct: 889 TGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMV 948
Query: 856 SGKTLPSFSPWDFSSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1035
SGKTLP F PWD++SRAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR
Sbjct: 949 SGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR 1008
Query: 1036 CLVKNLECLKVCYDYTVRDADGSIVQFCYGEDGVDVHHTSFLNKFEALAKNQEIIDQKFH 1215
CL+KNLE LK+CYD+TVRDADGS++QF YGEDGVDVH T+F+ KFEALA NQ+++ + H
Sbjct: 1009 CLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSH 1068
Query: 1216 HEL-EYNTYIKKLPSKLEER----VDKLTEISVKGKMTFEGXXXXXXXXXXXXXYLSSLA 1380
H+L +YN +I +LPS L E+ + L++ V G + E YLSSLA
Sbjct: 1069 HQLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKE-----DFIRLLENKYLSSLA 1123
Query: 1381 QPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASSDIKTPIVT 1560
QPGEPVGV+AAQS+GEPSTQMTLNTFH GRGEMNVTLGI RLQEILMTAS DIKTPI+T
Sbjct: 1124 QPGEPVGVLAAQSIGEPSTQMTLNTFHHVGRGEMNVTLGILRLQEILMTASQDIKTPIMT 1183
Query: 1561 CRLLEGKSKDEXXXXXXXXXXXXXXDITESVEICVIPLSIKKGKIYRIYKLKMKVKKQE- 1737
C L EG S D DI ES+ + V+P S +K +I IYKL++ E
Sbjct: 1184 CPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLEN 1243
Query: 1738 -----VVSEEDCQKTLETMFLRELEDAIENHIKSLSRISGIKDFKKDVLSSNASEIGEDV 1902
+S ED + TLET+FL ELE IE + LS+I+GIK+F D S +SE G++V
Sbjct: 1244 NAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSE-GDEV 1302
Query: 1903 SGSK------XXXXXXXXXXXXXXXXXXXNRKQQAXXXXXXXXXXXXXTNEVEPLTELVG 2064
S S+ +K QA N E T
Sbjct: 1303 SSSRQKENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFES 1362
Query: 2065 EIDQ-------------VVDEITSEIGHSEDDESSNMSCDEGFEPTSTNNKVKAESKKKA 2205
E+DQ +V + SE D S +MS ++ E + KVK+E
Sbjct: 1363 EVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSE----- 1417
Query: 2206 QEFRLSPKDTDRSCFVKTEGRDFEVHFRFVDEPHILLSQIVQKAAKKVPLKGSGKIEHCQ 2385
L K+TDRS FV+ + FEVHF+F +EPH LLSQIVQ+AA+KV ++ SGKI CQ
Sbjct: 1418 ----LVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ 1473
Query: 2386 QLS 2394
Q++
Sbjct: 1474 QIT 1476
Score = 82.4 bits (202), Expect(2) = 0.0
Identities = 35/71 (49%), Positives = 52/71 (73%)
Frame = +3
Query: 2472 KDLSKLCALKAAGTNITAFWEIQDILDVNYIYSNNISLMLKTYGIEVARKTIIKEVQDVF 2651
++ K+ AL+ +G + WE+QD LDV YIYSN+I ML+TYG+E AR TII+E+Q++F
Sbjct: 1498 EEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIF 1557
Query: 2652 KIYGVEIDYRH 2684
YG+ ++ RH
Sbjct: 1558 TSYGISVNIRH 1568