BLASTX nr result

ID: Bupleurum21_contig00006874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006874
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis...   328   7e-88
ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis...   328   7e-88
ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   327   2e-87
emb|CBI31848.3| unnamed protein product [Vitis vinifera]              327   2e-87
ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana] gi...   324   1e-86

>ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
          Length = 1045

 Score =  328 bits (840), Expect = 7e-88
 Identities = 165/219 (75%), Positives = 175/219 (79%)
 Frame = -1

Query: 657 WWEKSNFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWV 478
           WWEKS +FVAD+ SSKPPFVIVLPPPNVTGALHIGHALTAAI+D IIRWRRMSGYNTLWV
Sbjct: 101 WWEKSGYFVADAKSSKPPFVIVLPPPNVTGALHIGHALTAAIEDAIIRWRRMSGYNTLWV 160

Query: 477 PGMDHAGIATQVVVEKKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKDEHGG 298
           PG DHAGIATQVVVEKKIM                                  WK ++GG
Sbjct: 161 PGTDHAGIATQVVVEKKIMRERNLTRHDLGREKFISEVWE-------------WKTKYGG 207

Query: 297 TILKQLRRLGASLDWSRECFTMDEKRSRAVTDAFVRLHKEGLIYRDLRLVNWDCVLRTAI 118
           TILKQLRRLGASLDW+RECFTMDEKRSRAVT+AFVRL K GLIYRDLRLVNWDCVLRTAI
Sbjct: 208 TILKQLRRLGASLDWTRECFTMDEKRSRAVTEAFVRLFKNGLIYRDLRLVNWDCVLRTAI 267

Query: 117 SDIEVEYLDIKEPTLLKVPGYKKLVEFGVLTSFAYPLEG 1
           SDIEV+Y+DIKE TLLKVPGY+  VEFGVLTSFAYPLEG
Sbjct: 268 SDIEVDYIDIKEKTLLKVPGYENPVEFGVLTSFAYPLEG 306


>ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
          Length = 1045

 Score =  328 bits (840), Expect = 7e-88
 Identities = 165/219 (75%), Positives = 175/219 (79%)
 Frame = -1

Query: 657 WWEKSNFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWV 478
           WWEKS +FVAD+ SSKPPFVIVLPPPNVTGALHIGHALTAAI+D IIRWRRMSGYNTLWV
Sbjct: 101 WWEKSGYFVADAKSSKPPFVIVLPPPNVTGALHIGHALTAAIEDAIIRWRRMSGYNTLWV 160

Query: 477 PGMDHAGIATQVVVEKKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKDEHGG 298
           PG DHAGIATQVVVEKKIM                                  WK ++GG
Sbjct: 161 PGTDHAGIATQVVVEKKIMRERNLTRHDLGREKFISEVWE-------------WKTKYGG 207

Query: 297 TILKQLRRLGASLDWSRECFTMDEKRSRAVTDAFVRLHKEGLIYRDLRLVNWDCVLRTAI 118
           TILKQLRRLGASLDW+RECFTMDEKRSRAVT+AFVRL K GLIYRDLRLVNWDCVLRTAI
Sbjct: 208 TILKQLRRLGASLDWTRECFTMDEKRSRAVTEAFVRLFKNGLIYRDLRLVNWDCVLRTAI 267

Query: 117 SDIEVEYLDIKEPTLLKVPGYKKLVEFGVLTSFAYPLEG 1
           SDIEV+Y+DIKE TLLKVPGY+  VEFGVLTSFAYPLEG
Sbjct: 268 SDIEVDYIDIKEKTLLKVPGYENPVEFGVLTSFAYPLEG 306


>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1071

 Score =  327 bits (837), Expect = 2e-87
 Identities = 164/219 (74%), Positives = 176/219 (80%)
 Frame = -1

Query: 657 WWEKSNFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWV 478
           WWEKS FFVADSSSSKPPFVIVLPPPNVTGALHIGHALT+AIQDTIIRWRRMSGYN LWV
Sbjct: 116 WWEKSGFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTSAIQDTIIRWRRMSGYNALWV 175

Query: 477 PGMDHAGIATQVVVEKKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKDEHGG 298
           PGMDHAGIATQVVVEKK+M                                  WK+E+GG
Sbjct: 176 PGMDHAGIATQVVVEKKLMRERKLTRHDIGRENFVSEVWN-------------WKNEYGG 222

Query: 297 TILKQLRRLGASLDWSRECFTMDEKRSRAVTDAFVRLHKEGLIYRDLRLVNWDCVLRTAI 118
            ILKQ RR+GASLDW+RECFTMDEKRS AVT+AFVRL+KEGLIYRDLRLVNWDC+LRTAI
Sbjct: 223 VILKQQRRMGASLDWTRECFTMDEKRSLAVTEAFVRLYKEGLIYRDLRLVNWDCILRTAI 282

Query: 117 SDIEVEYLDIKEPTLLKVPGYKKLVEFGVLTSFAYPLEG 1
           SDIEV+Y DIK  TLLKVPGY+K VEFGVLTSFAYP+EG
Sbjct: 283 SDIEVDYEDIKVRTLLKVPGYEKPVEFGVLTSFAYPIEG 321


>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  327 bits (837), Expect = 2e-87
 Identities = 164/219 (74%), Positives = 176/219 (80%)
 Frame = -1

Query: 657 WWEKSNFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWV 478
           WWEKS FFVADSSSSKPPFVIVLPPPNVTGALHIGHALT+AIQDTIIRWRRMSGYN LWV
Sbjct: 151 WWEKSGFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTSAIQDTIIRWRRMSGYNALWV 210

Query: 477 PGMDHAGIATQVVVEKKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKDEHGG 298
           PGMDHAGIATQVVVEKK+M                                  WK+E+GG
Sbjct: 211 PGMDHAGIATQVVVEKKLMRERKLTRHDIGRENFVSEVWN-------------WKNEYGG 257

Query: 297 TILKQLRRLGASLDWSRECFTMDEKRSRAVTDAFVRLHKEGLIYRDLRLVNWDCVLRTAI 118
            ILKQ RR+GASLDW+RECFTMDEKRS AVT+AFVRL+KEGLIYRDLRLVNWDC+LRTAI
Sbjct: 258 VILKQQRRMGASLDWTRECFTMDEKRSLAVTEAFVRLYKEGLIYRDLRLVNWDCILRTAI 317

Query: 117 SDIEVEYLDIKEPTLLKVPGYKKLVEFGVLTSFAYPLEG 1
           SDIEV+Y DIK  TLLKVPGY+K VEFGVLTSFAYP+EG
Sbjct: 318 SDIEVDYEDIKVRTLLKVPGYEKPVEFGVLTSFAYPIEG 356


>ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
           gi|21542452|sp|P93736.2|SYV_ARATH RecName:
           Full=Valine--tRNA ligase; AltName: Full=Valyl-tRNA
           synthetase; Short=ValRS gi|332191069|gb|AEE29190.1|
           Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score =  324 bits (830), Expect = 1e-86
 Identities = 159/219 (72%), Positives = 178/219 (81%)
 Frame = -1

Query: 657 WWEKSNFFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWV 478
           WWEKS+ F AD+ SSKPPFVIVLPPPNVTGALHIGHALT+AI+DTIIRW+RMSGYN LWV
Sbjct: 152 WWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWV 211

Query: 477 PGMDHAGIATQVVVEKKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKDEHGG 298
           PG+DHAGIATQVVVEKKIM                                  WK+++GG
Sbjct: 212 PGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWK-------------WKNQYGG 258

Query: 297 TILKQLRRLGASLDWSRECFTMDEKRSRAVTDAFVRLHKEGLIYRDLRLVNWDCVLRTAI 118
           TIL QLRRLGASLDWSRECFTMDE+RS+AVT+AFVRL+KEGLIYRD+RLVNWDC+LRTAI
Sbjct: 259 TILTQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCILRTAI 318

Query: 117 SDIEVEYLDIKEPTLLKVPGYKKLVEFGVLTSFAYPLEG 1
           SD+EVEY+DIKE TLLKVPGY+K VEFG+LTSFAYPLEG
Sbjct: 319 SDVEVEYIDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEG 357


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