BLASTX nr result

ID: Bupleurum21_contig00006710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006710
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69267.1| hypothetical protein VITISV_043643 [Vitis vinifera]   214   1e-63
ref|XP_002276282.1| PREDICTED: uncharacterized protein LOC100258...   214   1e-63
ref|XP_002327423.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-59
ref|XP_003529738.1| PREDICTED: uncharacterized protein LOC100791...   200   2e-58
emb|CBI35979.3| unnamed protein product [Vitis vinifera]              214   2e-53

>emb|CAN69267.1| hypothetical protein VITISV_043643 [Vitis vinifera]
          Length = 1332

 Score =  214 bits (546), Expect(2) = 1e-63
 Identities = 106/188 (56%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = +2

Query: 368  EGYGDTQREVMVVTSQLDEAVQGRL-YSTRESKRRKTNTAFDLGDRCKDPPLMASRSGGN 544
            E YG+  + + V  +   +  +G   ++T+ESK +K+N   DL D+ KD  L  S + G 
Sbjct: 1144 EDYGEAHKRMPVSAALQQDTKRGLASHATKESKTQKSNMVPDLSDKQKDAFLTDSSNNGR 1203

Query: 545  KKSGSFSDDNNFSYCKYEKDKPELKGPIKDHSQYKEYVQEFREKYDDYFSINKILESERN 724
            K+  S SD+N+ SY KYEK++PELKGPIKD SQYKEYVQE+ EKYD Y S+NKILES RN
Sbjct: 1204 KRRESSSDENSCSYSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSLNKILESYRN 1263

Query: 725  EFERYGRDLEAAKGRDMNRYYSILEELKESYNQCGMRHKRLKKVFVVLHEELESLKEMIK 904
            EF + G+DLE AKGRD+ RYY+ILE+LK++Y+QC  RHKRLKK+FVVLHEEL++LK+ IK
Sbjct: 1264 EFHKLGKDLEVAKGRDLERYYNILEQLKDTYSQCSTRHKRLKKIFVVLHEELKNLKQRIK 1323

Query: 905  EYANSCTK 928
            +YA   T+
Sbjct: 1324 DYALPYTR 1331



 Score = 56.2 bits (134), Expect(2) = 1e-63
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3    QFENKLTSFDYWNPDVSKGEAAGRTGVDLVKPSQPXXXXXXXXXXEGLSKKRSPKHH-KD 179
            Q ENKL++ D W  DV++G+  G+  +D  K S            E  SKKR+ +H+ +D
Sbjct: 1033 QSENKLSTSDNWTSDVNRGKHVGKATLDSGKLSPSHLDAGVSSNPEASSKKRTKEHNFED 1092

Query: 180  STKSQHKVIQSHPPELPRVNQTEVGSQ 260
              +   ++ QS P ++ RV+  EVGSQ
Sbjct: 1093 IARPHPRIGQSQPQQISRVDHAEVGSQ 1119


>ref|XP_002276282.1| PREDICTED: uncharacterized protein LOC100258409 [Vitis vinifera]
          Length = 1253

 Score =  214 bits (546), Expect(2) = 1e-63
 Identities = 106/188 (56%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = +2

Query: 368  EGYGDTQREVMVVTSQLDEAVQGRL-YSTRESKRRKTNTAFDLGDRCKDPPLMASRSGGN 544
            E YG+  + + V  +   +  +G   ++T+ESK +K+N   DL D+ KD  L  S + G 
Sbjct: 1065 EDYGEAHKRMPVSAALQQDTKRGLASHATKESKTQKSNMVPDLSDKQKDAFLTDSSNNGR 1124

Query: 545  KKSGSFSDDNNFSYCKYEKDKPELKGPIKDHSQYKEYVQEFREKYDDYFSINKILESERN 724
            K+  S SD+N+ SY KYEK++PELKGPIKD SQYKEYVQE+ EKYD Y S+NKILES RN
Sbjct: 1125 KRRESSSDENSCSYSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSLNKILESYRN 1184

Query: 725  EFERYGRDLEAAKGRDMNRYYSILEELKESYNQCGMRHKRLKKVFVVLHEELESLKEMIK 904
            EF + G+DLE AKGRD+ RYY+ILE+LK++Y+QC  RHKRLKK+FVVLHEEL++LK+ IK
Sbjct: 1185 EFHKLGKDLEVAKGRDLERYYNILEQLKDTYSQCSTRHKRLKKIFVVLHEELKNLKQRIK 1244

Query: 905  EYANSCTK 928
            +YA   T+
Sbjct: 1245 DYALPYTR 1252



 Score = 56.2 bits (134), Expect(2) = 1e-63
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3    QFENKLTSFDYWNPDVSKGEAAGRTGVDLVKPSQPXXXXXXXXXXEGLSKKRSPKHH-KD 179
            Q ENKL++ D W  DV++G+  G+  +D  K S            E  SKKR+ +H+ +D
Sbjct: 954  QSENKLSTSDNWTSDVNRGKHVGKATLDSGKLSPSHLDAGVSSNPEASSKKRTKEHNFED 1013

Query: 180  STKSQHKVIQSHPPELPRVNQTEVGSQ 260
              +   ++ QS P ++ RV+  EVGSQ
Sbjct: 1014 IARPHPRIGQSQPQQISRVDHAEVGSQ 1040


>ref|XP_002327423.1| predicted protein [Populus trichocarpa] gi|222835977|gb|EEE74398.1|
            predicted protein [Populus trichocarpa]
          Length = 1212

 Score =  206 bits (524), Expect(2) = 4e-59
 Identities = 100/189 (52%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
 Frame = +2

Query: 365  LEGYGDTQREVMVVTSQLDEAVQGRL-YSTRESKRRKTNTAFDLGDRCKDPPLMASRSGG 541
            +EGYG++ ++  +   +L E+  G L +S +ESK + +N   DL +  KD  +    +  
Sbjct: 1023 MEGYGESHKKAPLSAQKLHESKCGTLPHSIKESKTQPSNLMADLINGRKDTLMTEDSNNV 1082

Query: 542  NKKSGSFSDDNNFSYCKYEKDKPELKGPIKDHSQYKEYVQEFREKYDDYFSINKILESER 721
            +KK  S S+D++ SY KYEKD+PE +GPIKD SQY+EYVQE+R+KYD Y S+N+ILES R
Sbjct: 1083 SKKRESSSEDDSSSYSKYEKDEPEFRGPIKDFSQYQEYVQEYRDKYDSYCSLNRILESYR 1142

Query: 722  NEFERYGRDLEAAKGRDMNRYYSILEELKESYNQCGMRHKRLKKVFVVLHEELESLKEMI 901
            NEF + G+DLE+AKGRDM+RY++IL +LK+SY+QCGM+H+RLKK+F+VLH+ELE LK+ I
Sbjct: 1143 NEFHKLGKDLESAKGRDMDRYHNILVQLKDSYSQCGMKHRRLKKIFIVLHKELEQLKQRI 1202

Query: 902  KEYANSCTK 928
            K++  S TK
Sbjct: 1203 KDFVPSNTK 1211



 Score = 49.7 bits (117), Expect(2) = 4e-59
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 9    ENKLTSFDYWNPDVSKGEAAGRTGVDLVKPSQPXXXXXXXXXXEGLSKKRSPKHHKDS-T 185
            ENK ++ D  N D++KG++ G+  +D  KPS                 KRSP+H  D  T
Sbjct: 925  ENKSSTSDNCNSDINKGKSIGKVSLDSGKPSPNL----------SAGVKRSPEHRVDDLT 974

Query: 186  KSQHKVIQSHPPELPRVNQTEVGS 257
            +  HK +QS P  +  V+  +VGS
Sbjct: 975  RPNHKAMQSQPQHVSSVDNLDVGS 998


>ref|XP_003529738.1| PREDICTED: uncharacterized protein LOC100791352 [Glycine max]
          Length = 1235

 Score =  200 bits (509), Expect(2) = 2e-58
 Identities = 101/189 (53%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = +2

Query: 365  LEGYGDTQREVMVVTSQLDEAVQGRLYS-TRESKRRKTNTAFDLGDRCKDPPLMASRSGG 541
            LEG  ++ R V    S+  ++ +G +    +ESKR+  N+  ++ D  KD  + A R+  
Sbjct: 1048 LEGRSESNRRVPANASKPQDSKRGIVSDPVKESKRQTPNSVEEMADGGKDS-VFADRNHS 1106

Query: 542  NKKSGSFSDDNNFSYCKYEKDKPELKGPIKDHSQYKEYVQEFREKYDDYFSINKILESER 721
            ++K    SD+N+ SY KYEKD+PELKGPI+  SQYKEYVQEF++KYD Y S+NKILE  R
Sbjct: 1107 DQKKRESSDENSCSYSKYEKDEPELKGPIRTFSQYKEYVQEFQDKYDSYCSLNKILEGYR 1166

Query: 722  NEFERYGRDLEAAKGRDMNRYYSILEELKESYNQCGMRHKRLKKVFVVLHEELESLKEMI 901
            ++F++ G DLE AKGRDM+RYY I+E+LKESY +CG RHKRL+K+FVVLH ELE+LK  I
Sbjct: 1167 DQFQKLGNDLELAKGRDMDRYYDIVEQLKESYRRCGPRHKRLRKIFVVLHTELENLKRRI 1226

Query: 902  KEYANSCTK 928
            K++ANS  K
Sbjct: 1227 KDFANSYNK 1235



 Score = 53.1 bits (126), Expect(2) = 2e-58
 Identities = 31/86 (36%), Positives = 46/86 (53%)
 Frame = +3

Query: 3    QFENKLTSFDYWNPDVSKGEAAGRTGVDLVKPSQPXXXXXXXXXXEGLSKKRSPKHHKDS 182
            Q ENK  + +  N D++K + + +   DL KPS            +  +KK S  H +DS
Sbjct: 941  QLENKANTSEDRNSDITKVKPSLKATSDLGKPSSAFVNSGFPCNFDNTNKKNSDNHFEDS 1000

Query: 183  TKSQHKVIQSHPPELPRVNQTEVGSQ 260
            TKS+ +V+Q+H   L R +  EVGSQ
Sbjct: 1001 TKSRSRVMQTHSQHL-RADPAEVGSQ 1025


>emb|CBI35979.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  214 bits (546), Expect = 2e-53
 Identities = 106/188 (56%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = +2

Query: 368  EGYGDTQREVMVVTSQLDEAVQGRL-YSTRESKRRKTNTAFDLGDRCKDPPLMASRSGGN 544
            E YG+  + + V  +   +  +G   ++T+ESK +K+N   DL D+ KD  L  S + G 
Sbjct: 910  EDYGEAHKRMPVSAALQQDTKRGLASHATKESKTQKSNMVPDLSDKQKDAFLTDSSNNGR 969

Query: 545  KKSGSFSDDNNFSYCKYEKDKPELKGPIKDHSQYKEYVQEFREKYDDYFSINKILESERN 724
            K+  S SD+N+ SY KYEK++PELKGPIKD SQYKEYVQE+ EKYD Y S+NKILES RN
Sbjct: 970  KRRESSSDENSCSYSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSLNKILESYRN 1029

Query: 725  EFERYGRDLEAAKGRDMNRYYSILEELKESYNQCGMRHKRLKKVFVVLHEELESLKEMIK 904
            EF + G+DLE AKGRD+ RYY+ILE+LK++Y+QC  RHKRLKK+FVVLHEEL++LK+ IK
Sbjct: 1030 EFHKLGKDLEVAKGRDLERYYNILEQLKDTYSQCSTRHKRLKKIFVVLHEELKNLKQRIK 1089

Query: 905  EYANSCTK 928
            +YA   T+
Sbjct: 1090 DYALPYTR 1097


Top