BLASTX nr result

ID: Bupleurum21_contig00006600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006600
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ...   204   2e-50
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   191   4e-46
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              191   4e-46
ref|XP_002311786.1| SIN3 component, histone deacetylase complex ...   182   2e-43
ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein ...   177   4e-42

>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
            vinifera]
          Length = 1395

 Score =  204 bits (520), Expect = 2e-50
 Identities = 158/425 (37%), Positives = 220/425 (51%), Gaps = 54/425 (12%)
 Frame = +1

Query: 4    EQSKKVMSLWSTFLEPMLGVASRPLDPENPY--------ALQSNRTDIRSKHGSPSAADP 159
            EQ  KVM LW+TFLEPMLGV SR    E           A++S+ +    + GSP A + 
Sbjct: 728  EQLNKVMRLWTTFLEPMLGVPSRVDREEGAEDVAKARHGAVKSSASSTGERDGSPGA-EA 786

Query: 160  ATMNVEETNTLSNG--NVSPDRIHSSNSFLLNGD-IPL---------KGDGVCLHKSLEH 303
            A MN ++ N  SNG  N  P+  +S  + L+NGD +P          K D   L K L++
Sbjct: 787  AVMNSKQPNLASNGDENAIPESANSCRASLVNGDSLPKDDHDSSHISKDDPPRLEKELKN 846

Query: 304  TSA-------NGTANSADHLANSDAGLLVGAGHDLAQG-----SSICATEN--------- 420
             +A       N    S + L +S+A L  GA ++L +      S   +T +         
Sbjct: 847  VAATEKISGFNIQVGSGEQLIDSNASLATGAENNLGRAHMEVMSGHVSTPSRPGNVAIEE 906

Query: 421  ------GQEIASET-DVMKHXXXXXXXXXXXXAPTDGSNVPKYKEDHVGPSNVEKEEGEL 579
                  G + +SE  DVM+               ++G+ + KY  + VGPS +EKEEGEL
Sbjct: 907  AHEHKPGFDASSEGGDVMRTVISANGVL------SEGTKLNKYHAESVGPSKIEKEEGEL 960

Query: 580  SPTGDIEENDFVANG--SSSSLSKAERITEATRYQEKIGEDTSCHNV-RXXXXXXXXXXX 750
            SP GD EE++FV  G  S+ ++  A+  +E  ++Q   G++  C                
Sbjct: 961  SPNGDFEEDNFVVYGDASTQAVPLAKHSSERRQFQAGDGQERDCQVAGGENGADADDEDS 1020

Query: 751  XXXXXXGEDVSGSESAADDCSR-XXXXXXXGDHDGIDGKCESGCEAEGMDDI-VSEGDGL 924
                  GEDVS SESA D+CSR         +HD +DGK ES  EA+G+ D     G+G+
Sbjct: 1021 ENVSEAGEDVSASESAGDECSRGEQEEEEDAEHDELDGKAESEGEADGVADANFVGGNGV 1080

Query: 925  CSPSSERFLLASKPLAKHVASTLRNMGK-VSKVFYGNDTFYVLFRLHQILYDRLLFAKKH 1101
              P SERFL   KPLAKHVAS+L +  K  S+VFYGNDTFYVLFRLH++LY+R+L AK +
Sbjct: 1081 ILPLSERFLPTVKPLAKHVASSLHDKEKNDSRVFYGNDTFYVLFRLHRVLYERILSAKVN 1140

Query: 1102 LSAVE 1116
             ++ E
Sbjct: 1141 STSAE 1145


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score =  191 bits (484), Expect = 4e-46
 Identities = 149/432 (34%), Positives = 204/432 (47%), Gaps = 61/432 (14%)
 Frame = +1

Query: 4    EQSKKVMSLWSTFLEPMLGVASRPLDPENP--------YALQSNRTDIRSKHGSPSAADP 159
            EQ  KVM +W+TFLEPMLGV SRP   E+         +A ++    I    GSP     
Sbjct: 734  EQLDKVMKIWTTFLEPMLGVPSRPQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGAS 793

Query: 160  ATMNVEETNTLSNGN--VSPDRIHSSNSFLLNGD-------------IPLKGDGVCL--H 288
            AT N ++ N+  NG+  + P++  S   +++NGD             +P K D  C    
Sbjct: 794  AT-NTKQINSSRNGDETIPPEQSSSCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQ 852

Query: 289  KSLEHTSA------NGTANSA---DHLANSDAGLLVGAGH-----DLAQGSSICAT---- 414
            +    TSA      +G +  A   + + NS+A L  GA       ++   S + AT    
Sbjct: 853  QGKMQTSAAMADEMSGVSKQATCNERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRA 912

Query: 415  -----ENGQEIASETDVMKHXXXXXXXXXXXXAPTDGSNVPKYKEDHVGPSNVEKEEGEL 579
                 E+G E+    +V                 T+G    +Y E+  G S +E+EEGEL
Sbjct: 913  SNTALESGLELRPSNEV---GDCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREEGEL 969

Query: 580  SPTGDIEENDFVANGSSSSLSKAERITEATRYQEKIGEDTSC-----------HNVRXXX 726
            SP GD EE++F   G +    K++    + +YQ + G +  C            +     
Sbjct: 970  SPNGDFEEDNFAVYGDAGVEGKSKDTAASRQYQTRHGVEEICCGEAGGENDADADDEGEE 1029

Query: 727  XXXXXXXXXXXXXXGEDVSGSESA-ADDCSRXXXXXXXGDHDGIDGKCESGCEAEGMDDI 903
                            DVSGSES   ++CSR       GDHD  D K ES  EAEGM D 
Sbjct: 1030 SAQRSSEDSENASENGDVSGSESGEGEECSREEHEED-GDHDEHDNKAESEGEAEGMADA 1088

Query: 904  VS-EGDGLCSPSSERFLLASKPLAKHVASTLRNMGKVSKVFYGNDTFYVLFRLHQILYDR 1080
               EGDG   P SERFLL  KPLAKHV  +L++  K S+VFYGND+FYVLFRLHQ LY+R
Sbjct: 1089 HDVEGDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYER 1148

Query: 1081 LLFAKKHLSAVE 1116
            +  AK + S+ E
Sbjct: 1149 MQSAKLNSSSGE 1160


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  191 bits (484), Expect = 4e-46
 Identities = 149/435 (34%), Positives = 205/435 (47%), Gaps = 64/435 (14%)
 Frame = +1

Query: 4    EQSKKVMSLWSTFLEPMLGVASRPLDPENP--------YALQSNRTDIRSKHGSPSAADP 159
            EQ  KVM +W+TFLEPMLGV SRP   E+         +A ++    I    GSP     
Sbjct: 752  EQLDKVMKIWTTFLEPMLGVPSRPQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGAS 811

Query: 160  ATMNVEETNTLSNGN--VSPDRIHSSNSFLLNGD-------------IPLKGDGVCL--H 288
            AT N ++ N+  NG+  + P++  S   +++NGD             +P K D  C    
Sbjct: 812  AT-NTKQINSSRNGDETIPPEQSSSCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQ 870

Query: 289  KSLEHTSA------NGTANSA---DHLANSDAGLLVGAGH-----DLAQGSSICAT---- 414
            +    TSA      +G +  A   + + NS+A L  GA       ++   S + AT    
Sbjct: 871  QGKMQTSAAMADEMSGVSKQATCNERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRA 930

Query: 415  -----ENGQEIASETDVMKHXXXXXXXXXXXXAP---TDGSNVPKYKEDHVGPSNVEKEE 570
                 E+G E+    +V+                   T+G    +Y E+  G S +E+EE
Sbjct: 931  SNTALESGLELRPSNEVLPSSEVGDCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREE 990

Query: 571  GELSPTGDIEENDFVANGSSSSLSKAERITEATRYQEKIGEDTSC-----------HNVR 717
            GELSP GD EE++F   G +    K++    + +YQ + G +  C            +  
Sbjct: 991  GELSPNGDFEEDNFAVYGDAGVEGKSKDTAASRQYQTRHGVEEICCGEAGGENDADADDE 1050

Query: 718  XXXXXXXXXXXXXXXXXGEDVSGSESA-ADDCSRXXXXXXXGDHDGIDGKCESGCEAEGM 894
                               DVSGSES   ++CSR       GDHD  D K ES  EAEGM
Sbjct: 1051 GEESAQRSSEDSENASENGDVSGSESGEGEECSREEHEED-GDHDEHDNKAESEGEAEGM 1109

Query: 895  DDIVS-EGDGLCSPSSERFLLASKPLAKHVASTLRNMGKVSKVFYGNDTFYVLFRLHQIL 1071
             D    EGDG   P SERFLL  KPLAKHV  +L++  K S+VFYGND+FYVLFRLHQ L
Sbjct: 1110 ADAHDVEGDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTL 1169

Query: 1072 YDRLLFAKKHLSAVE 1116
            Y+R+  AK + S+ E
Sbjct: 1170 YERMQSAKLNSSSGE 1184


>ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222851606|gb|EEE89153.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score =  182 bits (461), Expect = 2e-43
 Identities = 134/385 (34%), Positives = 187/385 (48%), Gaps = 14/385 (3%)
 Frame = +1

Query: 4    EQSKKVMSLWSTFLEPMLGVASRPL---DPENPYALQSNRTDIRSKHGSPSAADPATMNV 174
            EQ  KVM +W+TFLEPMLGV SRP    D E+    ++  +      GSPS     T N 
Sbjct: 702  EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKNQSSKSGESEGSPSGGGAVT-NS 760

Query: 175  EETNTLSNGN--VSPDRIHSSNSFLLNGDIPLKGDGVCLHKSLEHTSANGTANSADHLAN 348
            + +N   NG+  + P++  SS +++LNG+  +K +G       +H +     +++     
Sbjct: 761  KHSNPSRNGDESIQPEQSSSSRAWMLNGENRVKENG---SPDADHVARKSDTSTST--LQ 815

Query: 349  SDAGLLVGAGHDLAQGSSICATENGQEIASETDVMKHXXXXXXXXXXXXAPTDGSNVP-- 522
             D  L+  A  D   G +  A  N + + S   ++                T+G      
Sbjct: 816  HDKVLINAAAADELSGVTKQAPSNDRLLNSNASLVTGAELKGGEFSRPPVSTNGVATEVI 875

Query: 523  ---KYKEDHVGPSNVEKEEGELSPTGDIEENDFVANGSSS--SLSKAERITEATRYQEKI 687
               +Y ++      +E+EEGELSP GD EE++F   G +   +  K E   EA    +  
Sbjct: 876  KSNRYNDESAAQFKIEREEGELSPNGDFEEDNFAVYGEAGLEAAHKGEECGEAGGENDAD 935

Query: 688  GEDTSCHNVRXXXXXXXXXXXXXXXXXGEDVSGSESA-ADDCSRXXXXXXXGDHDGIDGK 864
             +D    + +                   DVSGSES   +DCSR       GDHD  D K
Sbjct: 936  ADDEGGESAQRSSEDSENASENG------DVSGSESGDGEDCSREEHEED-GDHDEHDNK 988

Query: 865  CESGCEAEGMDDIVS-EGDGLCSPSSERFLLASKPLAKHVASTLRNMGKVSKVFYGNDTF 1041
             ES  EAEGM D    EG+G   P SERFLL  KPLAKHV  +L +  K  +VFYGND+F
Sbjct: 989  AESEGEAEGMADAHDVEGEGTILPFSERFLLNVKPLAKHVPPSLHDKEKGFRVFYGNDSF 1048

Query: 1042 YVLFRLHQILYDRLLFAKKHLSAVE 1116
            YVLFRLHQ LY+R+  AK + S+ E
Sbjct: 1049 YVLFRLHQTLYERIQSAKVNSSSAE 1073


>ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine
            max]
          Length = 1383

 Score =  177 bits (449), Expect = 4e-42
 Identities = 140/417 (33%), Positives = 198/417 (47%), Gaps = 45/417 (10%)
 Frame = +1

Query: 1    KEQSKKVMSLWSTFLEPMLGVASRPLDPENPYALQSNRTDIRSKHGSPSAADPA-----T 165
            KE   K+M LWSTFLEPMLGV S+    E     ++   ++R+  G+P+          T
Sbjct: 717  KELLNKIMRLWSTFLEPMLGVPSQSHGTERAEDRKTGH-NVRN-FGAPNVGGDGSPREDT 774

Query: 166  MNVEETNTLSNGNVSPDRI--------------HSSNSFLLNGDIPLKGDGVCLHKSLEH 303
            +++      S+ N +  R+              +   +  + G+I  + D + + K  ++
Sbjct: 775  LSINSRVPKSDKNEADGRVTEVKNVHWTTVAASNDKENGSVGGEIVSRDDPL-MDKGQKN 833

Query: 304  TSANGTAN-------SADHLANSDAGLLVGAGHDLAQ----GSSICATENGQEIASETDV 450
               N  A+       S +  A ++  + +   + L +     SS CA    Q    +  V
Sbjct: 834  VECNDKASGFSKQFASGEEGAKNNVSIAIRGENSLNRTNLDASSGCALTPSQPTDVDDSV 893

Query: 451  MKHXXXXXXXXXXXXAPT---------DGSNVPKYKEDHVGPSNVEKEEGELSPTGDIEE 603
             K               T           S+  K  ++  GP  +EKEEGELSP GD EE
Sbjct: 894  SKSQGVNVPSVEGCDMATPVPVVNGVLSESSKVKTHDESAGPCKIEKEEGELSPIGDSEE 953

Query: 604  NDFVANGSSS--SLSKAERITEATRYQEKIGEDTSCHNVRXXXXXXXXXXXXXXXXX-GE 774
            +++VA G S+  S++K++   E  +YQ + GED SC                      GE
Sbjct: 954  DNYVAYGDSNVQSMAKSKHNVEKRKYQSRNGEDESCPEAGGDNDADADDEDSENVSEAGE 1013

Query: 775  DVSGSESAADDCSRXXXXXXXG-DHDGIDGKCESGCEAEGMDDIVSEGDGLCSPSSERFL 951
            DVSGSESA D+C R         +HD +DGK ES  EAEG+ D    GDG   P SERFL
Sbjct: 1014 DVSGSESAGDECFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQVGGDGTSLPLSERFL 1073

Query: 952  LASKPLAKHVA--STLRNMGKVSKVFYGNDTFYVLFRLHQILYDRLLFAKKHLSAVE 1116
             + KPL KHV+  S +  M K S+VFYGND FYVLFRLHQ LY+R+L AK H  + E
Sbjct: 1074 SSVKPLTKHVSAVSFVEEM-KDSRVFYGNDDFYVLFRLHQALYERILSAKTHSMSAE 1129


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