BLASTX nr result

ID: Bupleurum21_contig00006427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006427
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...   251   1e-64
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...   251   1e-64
gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]    251   1e-64
gb|AFK34796.1| unknown [Lotus japonicus] gi|388499432|gb|AFK3778...   245   8e-63
ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycin...   245   8e-63

>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score =  251 bits (642), Expect = 1e-64
 Identities = 124/150 (82%), Positives = 135/150 (90%)
 Frame = -3

Query: 814 MTTVPGQLIWEIVKRNNSFLVKEFGNGNAGVQFSKEPNNLYNINSYKYSGLANKKTVTIQ 635
           M TVPGQLIWE+VK+NNSFLVKEFG G   VQFS+EPNNLYN+N++KYSGLANKKTVT+Q
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQ 60

Query: 634 PAGKDQGVLLATSRTKKQNTPARLLNKSVMKKEFHRMAKAVSNQVVDNYYRPDLKKAALA 455
           P GKDQ VLLAT++TKKQN PA LL+KSVMKKEF RMAKAV NQV DNYYRPDLKKAALA
Sbjct: 61  PTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALA 120

Query: 454 RLSAVNRSLKVAKSGVKKRNRQAVSVSGRK 365
           RLSAVNRSL+VAKSGVKKRNRQAV V  RK
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/150 (82%), Positives = 137/150 (91%)
 Frame = -3

Query: 814 MTTVPGQLIWEIVKRNNSFLVKEFGNGNAGVQFSKEPNNLYNINSYKYSGLANKKTVTIQ 635
           M+TVPGQLIWEIVK+NNSFLVKEFG G   VQFS+EPNNLYN+N++KYSGLAN+KTVT+Q
Sbjct: 1   MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQ 60

Query: 634 PAGKDQGVLLATSRTKKQNTPARLLNKSVMKKEFHRMAKAVSNQVVDNYYRPDLKKAALA 455
           PAGKDQ VLLAT++TKKQN PA LL+KSVMKKEF RMAKAV NQV DNYYRPDLK+AALA
Sbjct: 61  PAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALA 120

Query: 454 RLSAVNRSLKVAKSGVKKRNRQAVSVSGRK 365
           RLSAVNRSL+VAKSGVKKRNRQAV V  RK
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150


>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score =  251 bits (641), Expect = 1e-64
 Identities = 125/150 (83%), Positives = 136/150 (90%)
 Frame = -3

Query: 814 MTTVPGQLIWEIVKRNNSFLVKEFGNGNAGVQFSKEPNNLYNINSYKYSGLANKKTVTIQ 635
           M TVPGQLIWE+VKRNN FLVK+FG G AGV+FSKEPNNLYN+NSYK+SGLANKKTVTIQ
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSGLANKKTVTIQ 60

Query: 634 PAGKDQGVLLATSRTKKQNTPARLLNKSVMKKEFHRMAKAVSNQVVDNYYRPDLKKAALA 455
           PAGKDQ VLLAT+++KKQN P+ LL+KSVMKKEF RMAKAV NQV DNYYRPDL KAALA
Sbjct: 61  PAGKDQSVLLATTKSKKQNKPSSLLHKSVMKKEFPRMAKAVKNQVTDNYYRPDLTKAALA 120

Query: 454 RLSAVNRSLKVAKSGVKKRNRQAVSVSGRK 365
           RLSAVNRSLKVAKSGVKKRNRQA  + GRK
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQASRIHGRK 150


>gb|AFK34796.1| unknown [Lotus japonicus] gi|388499432|gb|AFK37782.1| unknown
           [Lotus japonicus]
          Length = 150

 Score =  245 bits (626), Expect = 8e-63
 Identities = 121/150 (80%), Positives = 134/150 (89%)
 Frame = -3

Query: 814 MTTVPGQLIWEIVKRNNSFLVKEFGNGNAGVQFSKEPNNLYNINSYKYSGLANKKTVTIQ 635
           M  +PGQL+WEIVKRNNSFLVKEFGNG   VQFS+EPNNLYN+N++KYSGLANKKTVTIQ
Sbjct: 1   MAAIPGQLVWEIVKRNNSFLVKEFGNGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTIQ 60

Query: 634 PAGKDQGVLLATSRTKKQNTPARLLNKSVMKKEFHRMAKAVSNQVVDNYYRPDLKKAALA 455
            AGKDQ VLL T+++KK+  PA L++KSVMKKEF RMAKAV NQV DNYYRPDLKKAALA
Sbjct: 61  AAGKDQSVLLGTTKSKKETKPAALVHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALA 120

Query: 454 RLSAVNRSLKVAKSGVKKRNRQAVSVSGRK 365
           RLSAVNRSLKVAKSGVKKRNRQAV V GR+
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQAVRVPGRQ 150


>ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycine max]
           gi|255627703|gb|ACU14196.1| unknown [Glycine max]
          Length = 150

 Score =  245 bits (626), Expect = 8e-63
 Identities = 121/150 (80%), Positives = 135/150 (90%)
 Frame = -3

Query: 814 MTTVPGQLIWEIVKRNNSFLVKEFGNGNAGVQFSKEPNNLYNINSYKYSGLANKKTVTIQ 635
           M TVPGQL+WEIVK+NNSFLVK+FG G   V+FS+E NNLYN+NS+KYSGLANKKTVT+Q
Sbjct: 1   MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKTVTVQ 60

Query: 634 PAGKDQGVLLATSRTKKQNTPARLLNKSVMKKEFHRMAKAVSNQVVDNYYRPDLKKAALA 455
           P GKDQ VLLAT++TKKQN PA LL+KSVMKKEF RMAKAV NQV +NYYRPDLKKAALA
Sbjct: 61  PEGKDQAVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVENQVAENYYRPDLKKAALA 120

Query: 454 RLSAVNRSLKVAKSGVKKRNRQAVSVSGRK 365
           RLSAV+RSLKVAKSGVKKRNRQAV V+ RK
Sbjct: 121 RLSAVHRSLKVAKSGVKKRNRQAVKVASRK 150


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