BLASTX nr result

ID: Bupleurum21_contig00006413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006413
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsil...   261   8e-68
ref|XP_004142957.1| PREDICTED: LOW QUALITY PROTEIN: T-complex pr...   261   8e-68
prf||2206327A T complex protein                                       261   8e-68
ref|XP_002315646.1| predicted protein [Populus trichocarpa] gi|2...   257   1e-66
ref|XP_002283538.1| PREDICTED: T-complex protein 1 subunit epsil...   255   4e-66

>ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Cucumis
           sativus]
          Length = 535

 Score =  261 bits (667), Expect = 8e-68
 Identities = 132/147 (89%), Positives = 142/147 (96%)
 Frame = -3

Query: 609 LEDTKRSIHDALCIARNLIHNNSIVYGGGGSAEISCSIAVEAAADKYPGVEQYAIRAFAD 430
           +E+TKRSIHDALC+ARNLI NNSIVYGGG SAEISCS+AVE AADKYPGVEQYAIRAFAD
Sbjct: 391 IEETKRSIHDALCVARNLIRNNSIVYGGG-SAEISCSVAVETAADKYPGVEQYAIRAFAD 449

Query: 429 ALDSVPMALAENSGLQPIETLSAVKSQQIKENNPWCGVDCNDVGTSDMREQNVFETLNGK 250
           ALD+VPMALAENSGLQPIETLSAVKSQQIKENNP+CG+DCND+GT+DMREQNVFETL GK
Sbjct: 450 ALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDIGTNDMREQNVFETLIGK 509

Query: 249 QQQLLLATQVVKMMILKIDDVISPSDY 169
           QQQ+LLATQVVK MILKIDDVISPSDY
Sbjct: 510 QQQILLATQVVK-MILKIDDVISPSDY 535


>ref|XP_004142957.1| PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit
           epsilon-like [Cucumis sativus]
          Length = 528

 Score =  261 bits (667), Expect = 8e-68
 Identities = 132/147 (89%), Positives = 142/147 (96%)
 Frame = -3

Query: 609 LEDTKRSIHDALCIARNLIHNNSIVYGGGGSAEISCSIAVEAAADKYPGVEQYAIRAFAD 430
           +E+TKRSIHDALC+ARNLI NNSIVYGGG SAEISCS+AVE AADKYPGVEQYAIRAFAD
Sbjct: 384 IEETKRSIHDALCVARNLIRNNSIVYGGG-SAEISCSVAVETAADKYPGVEQYAIRAFAD 442

Query: 429 ALDSVPMALAENSGLQPIETLSAVKSQQIKENNPWCGVDCNDVGTSDMREQNVFETLNGK 250
           ALD+VPMALAENSGLQPIETLSAVKSQQIKENNP+CG+DCND+GT+DMREQNVFETL GK
Sbjct: 443 ALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDIGTNDMREQNVFETLIGK 502

Query: 249 QQQLLLATQVVKMMILKIDDVISPSDY 169
           QQQ+LLATQVVK MILKIDDVISPSDY
Sbjct: 503 QQQILLATQVVK-MILKIDDVISPSDY 528


>prf||2206327A T complex protein
          Length = 534

 Score =  261 bits (667), Expect = 8e-68
 Identities = 132/147 (89%), Positives = 142/147 (96%)
 Frame = -3

Query: 609 LEDTKRSIHDALCIARNLIHNNSIVYGGGGSAEISCSIAVEAAADKYPGVEQYAIRAFAD 430
           +E+TKRSIHDALC+ARNLI NNSIVYGGG SAEISCS+AVE AADKYPGVEQYAIRAFAD
Sbjct: 390 IEETKRSIHDALCVARNLIRNNSIVYGGG-SAEISCSVAVETAADKYPGVEQYAIRAFAD 448

Query: 429 ALDSVPMALAENSGLQPIETLSAVKSQQIKENNPWCGVDCNDVGTSDMREQNVFETLNGK 250
           ALD+VPMALAENSGLQPIETLSAVKSQQIKENNP+CG+DCND+GT+DMREQNVFETL GK
Sbjct: 449 ALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDIGTNDMREQNVFETLIGK 508

Query: 249 QQQLLLATQVVKMMILKIDDVISPSDY 169
           QQQ+LLATQVVK MILKIDDVISPSDY
Sbjct: 509 QQQILLATQVVK-MILKIDDVISPSDY 534


>ref|XP_002315646.1| predicted protein [Populus trichocarpa] gi|222864686|gb|EEF01817.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  257 bits (656), Expect = 1e-66
 Identities = 130/147 (88%), Positives = 142/147 (96%)
 Frame = -3

Query: 609 LEDTKRSIHDALCIARNLIHNNSIVYGGGGSAEISCSIAVEAAADKYPGVEQYAIRAFAD 430
           +E+TKRSIHDALC+ARNLI NNSIVYGGG S+EISCSI+VEAAAD+YPGVEQYAIRAFAD
Sbjct: 391 IEETKRSIHDALCVARNLIRNNSIVYGGG-SSEISCSISVEAAADRYPGVEQYAIRAFAD 449

Query: 429 ALDSVPMALAENSGLQPIETLSAVKSQQIKENNPWCGVDCNDVGTSDMREQNVFETLNGK 250
           ALDSVPM+LAENSGLQPIETLSAVKSQQIKENNP+CG+DCND GT+DMREQNVFETL GK
Sbjct: 450 ALDSVPMSLAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDAGTNDMREQNVFETLIGK 509

Query: 249 QQQLLLATQVVKMMILKIDDVISPSDY 169
           QQQ+LLATQVVK MILKIDDVISPSD+
Sbjct: 510 QQQILLATQVVK-MILKIDDVISPSDF 535


>ref|XP_002283538.1| PREDICTED: T-complex protein 1 subunit epsilon [Vitis vinifera]
           gi|302143543|emb|CBI22104.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  255 bits (652), Expect = 4e-66
 Identities = 130/147 (88%), Positives = 140/147 (95%)
 Frame = -3

Query: 609 LEDTKRSIHDALCIARNLIHNNSIVYGGGGSAEISCSIAVEAAADKYPGVEQYAIRAFAD 430
           +E+TKRSIHDALC+ARN+I NNSIVYGGG SAEISCSIAVEAAADKYPGVEQYAIRAF D
Sbjct: 391 IEETKRSIHDALCVARNIIRNNSIVYGGG-SAEISCSIAVEAAADKYPGVEQYAIRAFGD 449

Query: 429 ALDSVPMALAENSGLQPIETLSAVKSQQIKENNPWCGVDCNDVGTSDMREQNVFETLNGK 250
           ALDS+PMALAENSGLQPIETLSAVKSQQIK+NN +CG+DCNDVGT DMREQNVFETL GK
Sbjct: 450 ALDSIPMALAENSGLQPIETLSAVKSQQIKDNNAYCGIDCNDVGTYDMREQNVFETLIGK 509

Query: 249 QQQLLLATQVVKMMILKIDDVISPSDY 169
           QQQ+LLATQVVK MILKIDDVISP+DY
Sbjct: 510 QQQILLATQVVK-MILKIDDVISPTDY 535


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