BLASTX nr result

ID: Bupleurum21_contig00006063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006063
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864894.1| hypothetical protein ARALYDRAFT_496632 [Arab...   689   0.0  
ref|NP_201235.4| GTP cyclohydrolase-2 [Arabidopsis thaliana] gi|...   687   0.0  
ref|XP_003593237.1| Riboflavin biosynthesis protein [Medicago tr...   683   0.0  
ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein r...   682   0.0  
ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein r...   681   0.0  

>ref|XP_002864894.1| hypothetical protein ARALYDRAFT_496632 [Arabidopsis lyrata subsp.
            lyrata] gi|297310729|gb|EFH41153.1| hypothetical protein
            ARALYDRAFT_496632 [Arabidopsis lyrata subsp. lyrata]
          Length = 541

 Score =  689 bits (1779), Expect = 0.0
 Identities = 340/396 (85%), Positives = 365/396 (92%)
 Frame = +1

Query: 1    SIPEAIEDIRQGKMXXXXXXXXXXXXXXLIMAASMATPESMAFIVKHGTGIVCVSMMEED 180
            SIP+AIEDIRQGK+              L+MAA +ATPE+MAFIVKHGTGIVCVSM E+D
Sbjct: 128  SIPQAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVKHGTGIVCVSMKEDD 187

Query: 181  LERLKIPLMVNHKDNEEILTTAFTVTVDAKHGTTTGVSARDRATTILALANKDSKPQDFN 360
            LERL +PLMVN K+NEE L+TAFTVTVDAKHGTTTGVSARDRATTIL+LA++DSKP+DFN
Sbjct: 188  LERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFN 247

Query: 361  RPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLREFA 540
            RPGHIFPLKYR GGVLKRAGHTEASVDLTVLAG +PV VLCEIVDDDGSMARLPKLREFA
Sbjct: 248  RPGHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFA 307

Query: 541  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYKSIIDGIEHIAMVKGE 720
               NLKIVSIADLIRYRRKRD+LVERSSAARIPT WGPFT+YCY+SI+DGIEHIAMVKGE
Sbjct: 308  AENNLKIVSIADLIRYRRKRDKLVERSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGE 367

Query: 721  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLGMAMQQIEAAGRGVLVYLRGHEGRGIGL 900
            IGDGQD+LVRVHSECLTGDIFGSARCDCGNQL +AMQQIEA GRGVLVYLRGHEGRGIGL
Sbjct: 368  IGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMQQIEATGRGVLVYLRGHEGRGIGL 427

Query: 901  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYVGL 1080
            GHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ++RDLGVRTMKLMTNNPAKYVGL
Sbjct: 428  GHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQVIRDLGVRTMKLMTNNPAKYVGL 487

Query: 1081 KGYGLAVAGRVPLVSLITKENKRYLETKRAKMGHIY 1188
            KGYGLA+ GRVPL+SLITKENKRYLETKR KMGH+Y
Sbjct: 488  KGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMY 523


>ref|NP_201235.4| GTP cyclohydrolase-2 [Arabidopsis thaliana]
            gi|27735197|sp|P47924.2|RIBBA_ARATH RecName:
            Full=Riboflavin biosynthesis protein ribBA,
            chloroplastic; Includes: RecName:
            Full=3,4-dihydroxy-2-butanone 4-phosphate synthase;
            Short=DHBP synthase; Includes: RecName: Full=GTP
            cyclohydrolase-2; AltName: Full=GTP cyclohydrolase II;
            Flags: Precursor gi|2462925|emb|CAA03884.1| GTP
            cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phoshate
            synthase [Arabidopsis thaliana]
            gi|9759406|dbj|BAB09861.1| GTP cyclohydrolase II;
            3,4-dihydroxy-2-butanone-4-phoshate synthase [Arabidopsis
            thaliana] gi|332010484|gb|AED97867.1| GTP
            cyclohydrolase-2 [Arabidopsis thaliana]
          Length = 543

 Score =  687 bits (1773), Expect = 0.0
 Identities = 338/396 (85%), Positives = 365/396 (92%)
 Frame = +1

Query: 1    SIPEAIEDIRQGKMXXXXXXXXXXXXXXLIMAASMATPESMAFIVKHGTGIVCVSMMEED 180
            SIPEAIEDIRQGK+              L+MAA +ATPE+MAFIV+HGTGIVCVSM E+D
Sbjct: 130  SIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDD 189

Query: 181  LERLKIPLMVNHKDNEEILTTAFTVTVDAKHGTTTGVSARDRATTILALANKDSKPQDFN 360
            LERL +PLMVN K+NEE L+TAFTVTVDAKHGTTTGVSARDRATTIL+LA++DSKP+DFN
Sbjct: 190  LERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFN 249

Query: 361  RPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLREFA 540
            RPGHIFPLKYR GGVLKRAGHTEASVDLTVLAG +PV VLCEIVDDDGSMARLPKLREFA
Sbjct: 250  RPGHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFA 309

Query: 541  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYKSIIDGIEHIAMVKGE 720
               NLK+VSIADLIRYRRKRD+LVER+SAARIPT WGPFT+YCY+SI+DGIEHIAMVKGE
Sbjct: 310  AENNLKVVSIADLIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGE 369

Query: 721  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLGMAMQQIEAAGRGVLVYLRGHEGRGIGL 900
            IGDGQD+LVRVHSECLTGDIFGSARCDCGNQL ++MQQIEA GRGVLVYLRGHEGRGIGL
Sbjct: 370  IGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGL 429

Query: 901  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYVGL 1080
            GHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQI+RDLGVRTMKLMTNNPAKYVGL
Sbjct: 430  GHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGL 489

Query: 1081 KGYGLAVAGRVPLVSLITKENKRYLETKRAKMGHIY 1188
            KGYGLA+ GRVPL+SLITKENKRYLETKR KMGH+Y
Sbjct: 490  KGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMY 525


>ref|XP_003593237.1| Riboflavin biosynthesis protein [Medicago truncatula]
            gi|355482285|gb|AES63488.1| Riboflavin biosynthesis
            protein [Medicago truncatula]
          Length = 541

 Score =  683 bits (1763), Expect = 0.0
 Identities = 338/396 (85%), Positives = 364/396 (91%)
 Frame = +1

Query: 1    SIPEAIEDIRQGKMXXXXXXXXXXXXXXLIMAASMATPESMAFIVKHGTGIVCVSMMEED 180
            SIPEAIEDIRQGKM              LIMAA +ATPE+MAFIVKHGTGIVCVSM EED
Sbjct: 123  SIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIVCVSMNEED 182

Query: 181  LERLKIPLMVNHKDNEEILTTAFTVTVDAKHGTTTGVSARDRATTILALANKDSKPQDFN 360
            L+RL++PLMV+ K N + L TAFTVTVDAKHGTTTGVSA+DRATT+LALA++DS P DFN
Sbjct: 183  LDRLELPLMVDSKANADKLRTAFTVTVDAKHGTTTGVSAQDRATTVLALASRDSTPADFN 242

Query: 361  RPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLREFA 540
            RPGHIFPLKYR GGVLKRAGHTEAS DLT+LAG EPV+VLCEIVDDDGSMARLPKLREFA
Sbjct: 243  RPGHIFPLKYRDGGVLKRAGHTEASADLTILAGLEPVAVLCEIVDDDGSMARLPKLREFA 302

Query: 541  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYKSIIDGIEHIAMVKGE 720
            KRENLKIVSIADLIRYRRKRDQLVERSSAARIPT WGPFTSYCYKS++DGIEHIAMVKG+
Sbjct: 303  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTMWGPFTSYCYKSLLDGIEHIAMVKGD 362

Query: 721  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLGMAMQQIEAAGRGVLVYLRGHEGRGIGL 900
            IGDG+DVLVRVHSECLTGDIFGSARCDCGNQL +AM+QIEAAGRGVLVYLRGHEGRGIGL
Sbjct: 363  IGDGEDVLVRVHSECLTGDIFGSARCDCGNQLALAMEQIEAAGRGVLVYLRGHEGRGIGL 422

Query: 901  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYVGL 1080
            GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGV++MKLMTNNP KYVGL
Sbjct: 423  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVQSMKLMTNNPTKYVGL 482

Query: 1081 KGYGLAVAGRVPLVSLITKENKRYLETKRAKMGHIY 1188
            KGYGL V+GR+PL++LIT ENKRYLETKR KMGH+Y
Sbjct: 483  KGYGLTVSGRIPLLTLITSENKRYLETKRTKMGHVY 518


>ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
            [Glycine max]
          Length = 544

 Score =  682 bits (1761), Expect = 0.0
 Identities = 336/396 (84%), Positives = 365/396 (92%)
 Frame = +1

Query: 1    SIPEAIEDIRQGKMXXXXXXXXXXXXXXLIMAASMATPESMAFIVKHGTGIVCVSMMEED 180
            SIPEAIEDIRQGKM              LIMAA +ATP++MAFIVKHGTGIVCVSM EED
Sbjct: 119  SIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPDAMAFIVKHGTGIVCVSMKEED 178

Query: 181  LERLKIPLMVNHKDNEEILTTAFTVTVDAKHGTTTGVSARDRATTILALANKDSKPQDFN 360
            L+RL++PLMVN KDN+E L TAFTVTVDAKHGTTTGVSA DRATT+LALA++DS P DFN
Sbjct: 179  LDRLELPLMVNSKDNDEKLCTAFTVTVDAKHGTTTGVSAHDRATTVLALASRDSTPGDFN 238

Query: 361  RPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLREFA 540
            RPGHIFPLKYR GGVLKRAGHTEASVDL VLAG +PV+VLCEIVDDDGSMARLPKLR+FA
Sbjct: 239  RPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLDPVAVLCEIVDDDGSMARLPKLRQFA 298

Query: 541  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYKSIIDGIEHIAMVKGE 720
            + ENLKIVSIADLIRYRRKRD+LV+RSSAA+IPT WGPFT+YCY+S++DGIEHIAMVKGE
Sbjct: 299  EHENLKIVSIADLIRYRRKRDKLVDRSSAAQIPTMWGPFTAYCYRSLLDGIEHIAMVKGE 358

Query: 721  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLGMAMQQIEAAGRGVLVYLRGHEGRGIGL 900
            IGDGQDVLVRVHSECLTGDIFGSARCDCGNQL +AMQQIEAAGRGVLVYLRGHEGRGIGL
Sbjct: 359  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGL 418

Query: 901  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYVGL 1080
            GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRDLGVR+MKLMTNNPAKY+GL
Sbjct: 419  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRSMKLMTNNPAKYIGL 478

Query: 1081 KGYGLAVAGRVPLVSLITKENKRYLETKRAKMGHIY 1188
            KGYGL V+GR+PL++LIT ENKRYLETKR KMGHIY
Sbjct: 479  KGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHIY 514


>ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
            [Glycine max]
          Length = 544

 Score =  681 bits (1756), Expect = 0.0
 Identities = 336/396 (84%), Positives = 364/396 (91%)
 Frame = +1

Query: 1    SIPEAIEDIRQGKMXXXXXXXXXXXXXXLIMAASMATPESMAFIVKHGTGIVCVSMMEED 180
            SI EAIEDIRQGKM              LIMAA +ATPE+MAFIVKHGTGIVCVSM EED
Sbjct: 119  SISEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEED 178

Query: 181  LERLKIPLMVNHKDNEEILTTAFTVTVDAKHGTTTGVSARDRATTILALANKDSKPQDFN 360
            L+RL++PLMVN K N+E L TAFTVTVDAKHGTTTGVSA DRATT+LALA++DS P DFN
Sbjct: 179  LDRLELPLMVNSKANDEKLRTAFTVTVDAKHGTTTGVSAHDRATTVLALASRDSTPGDFN 238

Query: 361  RPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLREFA 540
            RPGHIFPLKYR GGVLKRAGHTEAS DL VLAG +PV+VLCEIVDDDGSMARLPKLR+FA
Sbjct: 239  RPGHIFPLKYREGGVLKRAGHTEASADLAVLAGLDPVAVLCEIVDDDGSMARLPKLRQFA 298

Query: 541  KRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYKSIIDGIEHIAMVKGE 720
            +RENLKIVSIADLIRYRRKRD+LV+RSSAARIPTTWGPFT+YCY+S++DGIEHIAMVKG+
Sbjct: 299  ERENLKIVSIADLIRYRRKRDKLVDRSSAARIPTTWGPFTAYCYRSLLDGIEHIAMVKGD 358

Query: 721  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLGMAMQQIEAAGRGVLVYLRGHEGRGIGL 900
            IGDGQDVLVRVHSECLTGDIFGSARCDCGNQL +AMQQIEAAGRGVLVYLRGHEGRGIGL
Sbjct: 359  IGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGL 418

Query: 901  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYVGL 1080
            GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRDLGVR+MKLMTNNPAKY+GL
Sbjct: 419  GHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRSMKLMTNNPAKYIGL 478

Query: 1081 KGYGLAVAGRVPLVSLITKENKRYLETKRAKMGHIY 1188
            KGYGL V+GR+PL++LIT ENKRYLETKR KMGHIY
Sbjct: 479  KGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHIY 514


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