BLASTX nr result

ID: Bupleurum21_contig00006031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006031
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis v...   127   9e-28
emb|CBI36366.3| unnamed protein product [Vitis vinifera]              127   9e-28
emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]   127   9e-28
ref|XP_002517675.1| eukaryotic translation initiation factor 3 s...   107   8e-22
ref|XP_003604357.1| Tetratricopeptide-like helical domain-contai...   107   1e-21

>ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1702

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/124 (56%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    GTPKPDALIASKGHLSVSDLLDFISPDQDTKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDA IASKGHLSVSDLLD+ISPDQD+KGGDAQRK RRAKV  V DK  Q Q +  +
Sbjct: 1104 GTPKPDASIASKGHLSVSDLLDYISPDQDSKGGDAQRKQRRAKVVHVSDKFHQAQTDAMT 1163

Query: 178  SDAIVPASIETRSTATELSKVEDRADVVVPKEPKDIGIGKYDSVFT-EEAVQEATSDEGW 354
             D ++  + E  +   E +  E + D V PKEP D G  + +   T  E++QE  SDEGW
Sbjct: 1164 KDIVLHDNREKTTAVVEENTEEMKLDTVPPKEPTDNGNTRTEQTVTLIESIQETISDEGW 1223

Query: 355  QEAN 366
            QEAN
Sbjct: 1224 QEAN 1227


>emb|CBI36366.3| unnamed protein product [Vitis vinifera]
          Length = 1262

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/124 (56%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    GTPKPDALIASKGHLSVSDLLDFISPDQDTKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDA IASKGHLSVSDLLD+ISPDQD+KGGDAQRK RRAKV  V DK  Q Q +  +
Sbjct: 1104 GTPKPDASIASKGHLSVSDLLDYISPDQDSKGGDAQRKQRRAKVVHVSDKFHQAQTDAMT 1163

Query: 178  SDAIVPASIETRSTATELSKVEDRADVVVPKEPKDIGIGKYDSVFT-EEAVQEATSDEGW 354
             D ++  + E  +   E +  E + D V PKEP D G  + +   T  E++QE  SDEGW
Sbjct: 1164 KDIVLHDNREKTTAVVEENTEEMKLDTVPPKEPTDNGNTRTEQTVTLIESIQETISDEGW 1223

Query: 355  QEAN 366
            QEAN
Sbjct: 1224 QEAN 1227


>emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]
          Length = 1658

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/124 (56%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    GTPKPDALIASKGHLSVSDLLDFISPDQDTKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDA IASKGHLSVSDLLD+ISPDQD+KGGDAQRK RRAKV  V DK  Q Q +  +
Sbjct: 1060 GTPKPDASIASKGHLSVSDLLDYISPDQDSKGGDAQRKQRRAKVVHVSDKFHQAQTDAMT 1119

Query: 178  SDAIVPASIETRSTATELSKVEDRADVVVPKEPKDIGIGKYDSVFT-EEAVQEATSDEGW 354
             D ++  + E  +   E +  E + D V PKEP D G  + +   T  E++QE  SDEGW
Sbjct: 1120 KDIVLHDNREKTTAVVEENTEEMKLDTVPPKEPTDNGNTRTEQTVTLIESIQETISDEGW 1179

Query: 355  QEAN 366
            QEAN
Sbjct: 1180 QEAN 1183


>ref|XP_002517675.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223543307|gb|EEF44839.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1454

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    GTPKPDALIASKGHLSVSDLLDFISPDQDTKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDA IASKGHLSVSDLLD+ISPDQD++G +AQRK RR KV    DK  Q   +E  
Sbjct: 868  GTPKPDASIASKGHLSVSDLLDYISPDQDSRGSEAQRKQRRVKVLQNSDKGHQ---DETV 924

Query: 178  SDAIVPASIETRSTATELSKVEDRADVVVPKEPKDIG-IGKYDSVFTEEAVQEATSDEGW 354
             DA+V   +E  ++    +  E + +++  +E +  G +  + S+   E V+E T+DEGW
Sbjct: 925  EDAMVHDGMENATSLVNGNSEEVKLEIIQIEESEKKGNVAIHSSIVASEVVEEMTTDEGW 984

Query: 355  QEAN 366
            QEAN
Sbjct: 985  QEAN 988


>ref|XP_003604357.1| Tetratricopeptide-like helical domain-containing protein [Medicago
            truncatula] gi|355505412|gb|AES86554.1|
            Tetratricopeptide-like helical domain-containing protein
            [Medicago truncatula]
          Length = 1663

 Score =  107 bits (266), Expect = 1e-21
 Identities = 62/124 (50%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = +1

Query: 1    GTPKPDALIASKGHLSVSDLLDFISPDQDTKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPK D  IASKGHLSVSDLLDFISPD D+KG DAQRK RR K+ P+ D + Q  ++   
Sbjct: 1100 GTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNSQEHDDTPI 1159

Query: 178  SDAIVPASIETRSTATELSKVEDRADVVVPKEPKDI-GIGKYDSVFTEEAVQEATSDEGW 354
             D IV       +      K+E+       +EPK I  +  +  V T EAV E +SDEGW
Sbjct: 1160 VDDIVIVDNAKDAAKAVEGKIEEPKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGW 1219

Query: 355  QEAN 366
            QEAN
Sbjct: 1220 QEAN 1223


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