BLASTX nr result

ID: Bupleurum21_contig00005990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005990
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...   119   3e-25
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   117   1e-24
ref|XP_002966771.1| cellulose synthase-like D3-1, glycosyltransf...   115   3e-24
ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_001769175.1| cellulose synthase-like D4, glycosyltransfer...   115   5e-24

>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
           synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis]
          Length = 1162

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = +3

Query: 315 NCCILFVCRLIMVMRLAALVCFLIWRISHPNREAMWLWVMSVVCEVWFAFSWLLDQLPKI 494
           +  IL   RL++ MRLAAL  FL WRI HPNREAMWLW MS+ CEVWFA SWLLDQLPK+
Sbjct: 296 SAAILSPYRLLIAMRLAALGLFLTWRIRHPNREAMWLWGMSITCEVWFALSWLLDQLPKL 355

Query: 495 CPVNRVTDLSVLK 533
           CPVNRVTDLSVLK
Sbjct: 356 CPVNRVTDLSVLK 368


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/71 (71%), Positives = 61/71 (85%)
 Frame = +3

Query: 324 ILFVCRLIMVMRLAALVCFLIWRISHPNREAMWLWVMSVVCEVWFAFSWLLDQLPKICPV 503
           IL   RL++++RL AL  FL WRI HPNR+AMWLW MS+ CE+WFAFSWLLDQLPK+CPV
Sbjct: 309 ILSPYRLLIILRLVALGFFLTWRIRHPNRDAMWLWGMSITCELWFAFSWLLDQLPKLCPV 368

Query: 504 NRVTDLSVLKD 536
           NR+TDLSVLK+
Sbjct: 369 NRITDLSVLKE 379


>ref|XP_002966771.1| cellulose synthase-like D3-1, glycosyltransferase family 2 protein
           [Selaginella moellendorffii] gi|300166191|gb|EFJ32798.1|
           cellulose synthase-like D3-1, glycosyltransferase family
           2 protein [Selaginella moellendorffii]
          Length = 1134

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = +3

Query: 315 NCCILFVCRLIMVMRLAALVCFLIWRISHPNREAMWLWVMSVVCEVWFAFSWLLDQLPKI 494
           +  IL   RL++++RLA L  FL WR+ HPNR+AMWLW MSVVCE+WFAFSW+LDQLPK+
Sbjct: 282 SAAILSPYRLLVIVRLAVLGLFLEWRVRHPNRDAMWLWGMSVVCEIWFAFSWVLDQLPKL 341

Query: 495 CPVNRVTDLSVLKD 536
           CPVNR TDL+ LKD
Sbjct: 342 CPVNRATDLNALKD 355


>ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|222843220|gb|EEE80767.1|
           predicted protein [Populus trichocarpa]
          Length = 1165

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = +3

Query: 315 NCCILFVCRLIMVMRLAALVCFLIWRISHPNREAMWLWVMSVVCEVWFAFSWLLDQLPKI 494
           +  IL   RL++V+RL AL  FL WRI HPNREAMWLW MS+ CEVWFA SW+LDQLPK+
Sbjct: 301 SAAILSPYRLLIVIRLVALGLFLAWRIRHPNREAMWLWGMSITCEVWFALSWILDQLPKL 360

Query: 495 CPVNRVTDLSVLKD 536
           CPV+RVTDLSVLK+
Sbjct: 361 CPVHRVTDLSVLKE 374


>ref|XP_001769175.1| cellulose synthase-like D4, glycosyltransferase family 2 protein
           [Physcomitrella patens subsp. patens]
           gi|162679601|gb|EDQ66047.1| cellulose synthase-like D4,
           glycosyltransferase family 2 protein [Physcomitrella
           patens subsp. patens]
          Length = 1169

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/76 (63%), Positives = 64/76 (84%)
 Frame = +3

Query: 309 SQNCCILFVCRLIMVMRLAALVCFLIWRISHPNREAMWLWVMSVVCEVWFAFSWLLDQLP 488
           S +  IL   RLI+++R+  L  FL+WR++HPN +A+WLW MSVVCE+WFAFSW+LDQLP
Sbjct: 300 SISTAILSPYRLIVLIRMVVLALFLMWRVNHPNNDAIWLWGMSVVCEIWFAFSWILDQLP 359

Query: 489 KICPVNRVTDLSVLKD 536
           K+CP+NR+TDLSVLK+
Sbjct: 360 KLCPINRLTDLSVLKE 375


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