BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005987
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloro...   484   e-134
emb|CBI32677.3| unnamed protein product [Vitis vinifera]              484   e-134
ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloro...   480   e-133
ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus...   469   e-130
ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana...   462   e-128

>ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloroplastic [Vitis vinifera]
          Length = 370

 Score =  484 bits (1247), Expect = e-134
 Identities = 239/324 (73%), Positives = 255/324 (78%)
 Frame = +3

Query: 3    VAANNPNPXXXXXXXXXXXIQTPEAVPELSFLDRKESGLLHFVKYQGLGNDFILVDNRDC 182
            VA  NPN            I+  E   + SFLDRKESG LHFVKY GLGNDFILVDNRD 
Sbjct: 50   VAFRNPN---FRVSATSMSIEALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDS 106

Query: 183  VDPKITPEQAVKLCDRNFGIGADGVIFVLPGFNDTDYTMRIFNSDGSEPEMCGNGVRCFA 362
             +PK+TPEQAVKLCDRNFGIGADGVIF +PG N TDYTMRIFNSDGSEPEMCGNGVRCFA
Sbjct: 107  SEPKLTPEQAVKLCDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFA 166

Query: 363  KFIVELENLQGKQSFTVHTGAGLIVPEIQDDGKVRVDMGEPILNATDVPTKLSATNNQPV 542
            +FI ELENL GKQSFT+HTGAGLIVPEIQDDGKV+VDMG+PIL A DVPTKL A  +Q V
Sbjct: 167  RFIAELENLHGKQSFTLHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSV 226

Query: 543  VNRNIDVDGVSWNVTCVSMGNPHCVTFSKEGCQNLQVDGLNLADIGPKFEHHEMFPARIN 722
            V   ++VDGVSWNVTCVSMGNPHCVTF  +G QNLQVD LNLADIGPKFEHH MFPAR N
Sbjct: 227  VKSELNVDGVSWNVTCVSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTN 286

Query: 723  TEFVQVFSRSHVKMRVWERXXXXXXXXXXXXXXXXXXXXLEGRTERCCTVDLPGGPLEIE 902
            TEFVQV SRSH+KMRVWER                    LEG   R CTVDLPGGPL+IE
Sbjct: 287  TEFVQVISRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIE 346

Query: 903  WREEDNHVYMTGPAEVVFYGSVPL 974
            WREEDNHVYMTGPAE+VFYGSVPL
Sbjct: 347  WREEDNHVYMTGPAEIVFYGSVPL 370


>emb|CBI32677.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  484 bits (1245), Expect = e-134
 Identities = 234/305 (76%), Positives = 250/305 (81%)
 Frame = +3

Query: 60  IQTPEAVPELSFLDRKESGLLHFVKYQGLGNDFILVDNRDCVDPKITPEQAVKLCDRNFG 239
           I+  E   + SFLDRKESG LHFVKY GLGNDFILVDNRD  +PK+TPEQAVKLCDRNFG
Sbjct: 3   IEALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRNFG 62

Query: 240 IGADGVIFVLPGFNDTDYTMRIFNSDGSEPEMCGNGVRCFAKFIVELENLQGKQSFTVHT 419
           IGADGVIF +PG N TDYTMRIFNSDGSEPEMCGNGVRCFA+FI ELENL GKQSFT+HT
Sbjct: 63  IGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQSFTLHT 122

Query: 420 GAGLIVPEIQDDGKVRVDMGEPILNATDVPTKLSATNNQPVVNRNIDVDGVSWNVTCVSM 599
           GAGLIVPEIQDDGKV+VDMG+PIL A DVPTKL A  +Q VV   ++VDGVSWNVTCVSM
Sbjct: 123 GAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELNVDGVSWNVTCVSM 182

Query: 600 GNPHCVTFSKEGCQNLQVDGLNLADIGPKFEHHEMFPARINTEFVQVFSRSHVKMRVWER 779
           GNPHCVTF  +G QNLQVD LNLADIGPKFEHH MFPAR NTEFVQV SRSH+KMRVWER
Sbjct: 183 GNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQVISRSHLKMRVWER 242

Query: 780 XXXXXXXXXXXXXXXXXXXXLEGRTERCCTVDLPGGPLEIEWREEDNHVYMTGPAEVVFY 959
                               LEG   R CTVDLPGGPL+IEWREEDNHVYMTGPAE+VFY
Sbjct: 243 GAGATLACGTGACAVVVAAVLEGHAGRSCTVDLPGGPLDIEWREEDNHVYMTGPAEIVFY 302

Query: 960 GSVPL 974
           GSVPL
Sbjct: 303 GSVPL 307


>ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Cucumis
           sativus]
          Length = 364

 Score =  480 bits (1236), Expect = e-133
 Identities = 230/305 (75%), Positives = 252/305 (82%)
 Frame = +3

Query: 60  IQTPEAVPELSFLDRKESGLLHFVKYQGLGNDFILVDNRDCVDPKITPEQAVKLCDRNFG 239
           ++  E  P  SFLDR+ESGLLHFVKY GLGNDFILVDNRD  +P+ITPEQA KLCDRNFG
Sbjct: 59  LEVTEKAPSFSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFG 118

Query: 240 IGADGVIFVLPGFNDTDYTMRIFNSDGSEPEMCGNGVRCFAKFIVELENLQGKQSFTVHT 419
           IGADGVIF +PG N TDYTMRIFNSDGSEPEMCGNGVRCFA+FI ELENLQG+ SFTVHT
Sbjct: 119 IGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHT 178

Query: 420 GAGLIVPEIQDDGKVRVDMGEPILNATDVPTKLSATNNQPVVNRNIDVDGVSWNVTCVSM 599
           GAGLI+PE+QDDG+V+VDMGEPIL ATDVPT+L+ T +Q VV   I+VDGV+W+VTCVSM
Sbjct: 179 GAGLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSM 238

Query: 600 GNPHCVTFSKEGCQNLQVDGLNLADIGPKFEHHEMFPARINTEFVQVFSRSHVKMRVWER 779
           GNPHCVTFS +  QNLQVDG+NLA IGPKFEHHEMFPAR NTEFVQV S SH+KMRVWER
Sbjct: 239 GNPHCVTFSNKIEQNLQVDGINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWER 298

Query: 780 XXXXXXXXXXXXXXXXXXXXLEGRTERCCTVDLPGGPLEIEWREEDNHVYMTGPAEVVFY 959
                               LEGR  R CTVDLPGGPL+IEW EEDNHVYMTGPAEVVFY
Sbjct: 299 GAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEEDNHVYMTGPAEVVFY 358

Query: 960 GSVPL 974
           GSVPL
Sbjct: 359 GSVPL 363


>ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus communis]
            gi|223527214|gb|EEF29378.1| Diaminopimelate epimerase,
            putative [Ricinus communis]
          Length = 369

 Score =  469 bits (1207), Expect = e-130
 Identities = 224/324 (69%), Positives = 253/324 (78%)
 Frame = +3

Query: 3    VAANNPNPXXXXXXXXXXXIQTPEAVPELSFLDRKESGLLHFVKYQGLGNDFILVDNRDC 182
            +++ NPN             + PE +   SFLDR+ESG+ HFVKYQGLGNDFILVDNRD 
Sbjct: 46   ISSKNPNFRLLLVSAASMSAEAPEKISTASFLDRRESGIHHFVKYQGLGNDFILVDNRDS 105

Query: 183  VDPKITPEQAVKLCDRNFGIGADGVIFVLPGFNDTDYTMRIFNSDGSEPEMCGNGVRCFA 362
             +P+ITPEQAV+LCDRNFGIGADGVIF +PG N TDY+MRIFNSDGSEPEMCGNGVRCFA
Sbjct: 106  TEPRITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFA 165

Query: 363  KFIVELENLQGKQSFTVHTGAGLIVPEIQDDGKVRVDMGEPILNATDVPTKLSATNNQPV 542
            +FI ELENLQGKQSFT+HTGAGLIVPEIQ+DGKV+VDMGEPIL A+DVPT+L       V
Sbjct: 166  RFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLRENKGDAV 225

Query: 543  VNRNIDVDGVSWNVTCVSMGNPHCVTFSKEGCQNLQVDGLNLADIGPKFEHHEMFPARIN 722
            V   +++DGV+WNVTCVSMGNPHCVTF     Q+LQVD LNLA+IGPKFEHH++FPAR N
Sbjct: 226  VKAKLNIDGVTWNVTCVSMGNPHCVTFGSNENQDLQVDKLNLAEIGPKFEHHDVFPARTN 285

Query: 723  TEFVQVFSRSHVKMRVWERXXXXXXXXXXXXXXXXXXXXLEGRTERCCTVDLPGGPLEIE 902
            TEFVQV S SH+KMRVWER                    LEGR  R CTVDLPGGPLEIE
Sbjct: 286  TEFVQVHSHSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLEIE 345

Query: 903  WREEDNHVYMTGPAEVVFYGSVPL 974
            W+EEDNHVYMTGPAE VFYG+V L
Sbjct: 346  WKEEDNHVYMTGPAEAVFYGAVAL 369


>ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana]
           gi|75263858|sp|Q9LFG2.1|DAPF_ARATH RecName:
           Full=Diaminopimelate epimerase, chloroplastic; Short=DAP
           epimerase; Flags: Precursor gi|6729509|emb|CAB67665.1|
           diaminopimelate epimerase-like protein [Arabidopsis
           thaliana] gi|22022530|gb|AAM83223.1| AT3g53580/F4P12_280
           [Arabidopsis thaliana] gi|23505901|gb|AAN28810.1|
           At3g53580/F4P12_280 [Arabidopsis thaliana]
           gi|332645592|gb|AEE79113.1| diaminopimelate epimerase
           [Arabidopsis thaliana]
          Length = 362

 Score =  462 bits (1188), Expect = e-128
 Identities = 220/303 (72%), Positives = 242/303 (79%)
 Frame = +3

Query: 66  TPEAVPELSFLDRKESGLLHFVKYQGLGNDFILVDNRDCVDPKITPEQAVKLCDRNFGIG 245
           T E     SFLD+KE+G+LHFVKY GLGNDFILVDNRD  +PKIT EQA KLCDRNFG+G
Sbjct: 60  TAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVG 119

Query: 246 ADGVIFVLPGFNDTDYTMRIFNSDGSEPEMCGNGVRCFAKFIVELENLQGKQSFTVHTGA 425
           ADGVIF +PG N TDY MRIFNSDGSEPEMCGNGVRCFA+FI ELENLQGK SFT+HTGA
Sbjct: 120 ADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGA 179

Query: 426 GLIVPEIQDDGKVRVDMGEPILNATDVPTKLSATNNQPVVNRNIDVDGVSWNVTCVSMGN 605
           GLIVPEIQDDG+V+VDMG PIL A DVPTKLS    + VV   + VDGVSWNVTCVSMGN
Sbjct: 180 GLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGN 239

Query: 606 PHCVTFSKEGCQNLQVDGLNLADIGPKFEHHEMFPARINTEFVQVFSRSHVKMRVWERXX 785
           PHC+TF K+G  NL+VD LNL +IGPKFEHHEMFPAR NTEFV+V SRSH+KMRVWER  
Sbjct: 240 PHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGA 299

Query: 786 XXXXXXXXXXXXXXXXXXLEGRTERCCTVDLPGGPLEIEWREEDNHVYMTGPAEVVFYGS 965
                             LEGR +R CTVDLPGGPLEIEW++EDNH+YMTGPAE VFYGS
Sbjct: 300 GATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGS 359

Query: 966 VPL 974
             L
Sbjct: 360 ALL 362