BLASTX nr result

ID: Bupleurum21_contig00005981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005981
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAN71115.1| hypothetical protein VITISV_033889 [Vitis vinifera]    67   2e-09
ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium d...    67   3e-09
ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinif...    66   5e-09
emb|CBI19816.3| unnamed protein product [Vitis vinifera]               66   5e-09

>ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|222843721|gb|EEE81268.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -3

Query: 560 EEMNGNAKGKKQSRGKASNRGRGRGGKATTETPKSSGRGRGRPADKN-SADTSKTSSGKR 384
           +++NG  + K +  GK S RG+ +GGK +T   KS+GRGRGRP   N S  +S+  +GKR
Sbjct: 485 DQVNGQTEKKSKRGGKVSGRGQSKGGKKSTSDGKSTGRGRGRPLSGNKSTVSSQEKAGKR 544

Query: 383 GRPRKS 366
           GRPRKS
Sbjct: 545 GRPRKS 550


>emb|CAN71115.1| hypothetical protein VITISV_033889 [Vitis vinifera]
          Length = 445

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -3

Query: 557 EMNGNAKGKKQSRGKASNRGRGRGGKATTETPKSSGRGRGRPADKNSADTSKTSSGKRGR 378
           E+NG A+ K+Q  GKAS RGRG+G K      K SGRGRGRP             GKRGR
Sbjct: 383 EVNGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPLAVEKTXQHSQGKGKRGR 442

Query: 377 PRK 369
           PRK
Sbjct: 443 PRK 445


>ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/70 (54%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
 Frame = -3

Query: 560 EEMNGNAKGKKQSRG-KASNRGRGRGGKATTETPKSSGRGRGRPADKNSADTSKTSSGK- 387
           ++ NG  KG K  RG K SNRGRGRG K  T  PK SGRGRGRP    S      SSG+ 
Sbjct: 478 DDENGVVKGTKGGRGRKPSNRGRGRGAKKATPDPKPSGRGRGRPKKTESPPQKAESSGRG 537

Query: 386 ----RGRPRK 369
               RGRPRK
Sbjct: 538 AKRGRGRPRK 547


>ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinifera]
          Length = 548

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -3

Query: 557 EMNGNAKGKKQSRGKASNRGRGRGGKATTETPKSSGRGRGRPADKNSADTSKTSSGKRGR 378
           E+NG A+ K+Q  GKAS RGRG+G K      K SGRGRGRP             GKRGR
Sbjct: 486 EVNGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPLAVEKTLQHSQGKGKRGR 545

Query: 377 PRK 369
           PRK
Sbjct: 546 PRK 548


>emb|CBI19816.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -3

Query: 557 EMNGNAKGKKQSRGKASNRGRGRGGKATTETPKSSGRGRGRPADKNSADTSKTSSGKRGR 378
           E+NG A+ K+Q  GKAS RGRG+G K      K SGRGRGRP             GKRGR
Sbjct: 480 EVNGEAEKKRQRGGKASGRGRGKGAKKPATGKKDSGRGRGRPLAVEKTLQHSQGKGKRGR 539

Query: 377 PRK 369
           PRK
Sbjct: 540 PRK 542


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