BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005967
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529506.1| pentatricopeptide repeat-containing protein,...   145   3e-33
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 808

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/104 (69%), Positives = 85/104 (81%), Gaps = 5/104 (4%)
 Frame = +3

Query: 6   EFMKNKRIPFSDAIFSEMASACSLLQDWRTTTLLISMME-----LSVGLLNNVLYSIGKS 170
           EFMK K IPFSDAIF EM SACSLL+DWRT   L+ +ME     +S+GLLN +L+ +G+S
Sbjct: 659 EFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRS 718

Query: 171 GKIEIMMKLYYKIVASGTEINFSTYTILLKNLLAAGNWRKYIEV 302
           GKIE MMKL+YKI ASG EINF+TY+I+LKNLLA GNWRKYIEV
Sbjct: 719 GKIESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRKYIEV 762


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/104 (69%), Positives = 84/104 (80%), Gaps = 5/104 (4%)
 Frame = +3

Query: 6   EFMKNKRIPFSDAIFSEMASACSLLQDWRTTTLLISMME-----LSVGLLNNVLYSIGKS 170
           EFM+ K IP SDAIF EM SACSLL+DWRTT  LI +ME     +S+GLLN +L+ +GKS
Sbjct: 643 EFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLMESSFSVVSIGLLNQLLHLLGKS 702

Query: 171 GKIEIMMKLYYKIVASGTEINFSTYTILLKNLLAAGNWRKYIEV 302
           GKIE MMKL+YKI+ SG EIN +TY+ILLKNLLA GNWRKYIEV
Sbjct: 703 GKIESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRKYIEV 746


>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/104 (67%), Positives = 85/104 (81%), Gaps = 5/104 (4%)
 Frame = +3

Query: 6   EFMKNKRIPFSDAIFSEMASACSLLQDWRTTTLLISMME-----LSVGLLNNVLYSIGKS 170
           EFM+ K+IPF+++ F EM SACSLL++WR    LI +ME     +S+GLLN +L+ +GKS
Sbjct: 678 EFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKS 737

Query: 171 GKIEIMMKLYYKIVASGTEINFSTYTILLKNLLAAGNWRKYIEV 302
           GKIE MMKL+YKIVASG EINF TY+ILLKNLLAAGNWRKYIEV
Sbjct: 738 GKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEV 781


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/104 (67%), Positives = 85/104 (81%), Gaps = 5/104 (4%)
 Frame = +3

Query: 6   EFMKNKRIPFSDAIFSEMASACSLLQDWRTTTLLISMME-----LSVGLLNNVLYSIGKS 170
           EFM+ K+IPF+++ F EM SACSLL++WR    LI +ME     +S+GLLN +L+ +GKS
Sbjct: 678 EFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKS 737

Query: 171 GKIEIMMKLYYKIVASGTEINFSTYTILLKNLLAAGNWRKYIEV 302
           GKIE MMKL+YKIVASG EINF TY+ILLKNLLAAGNWRKYIEV
Sbjct: 738 GKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEV 781


>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/104 (59%), Positives = 81/104 (77%), Gaps = 5/104 (4%)
 Frame = +3

Query: 6   EFMKNKRIPFSDAIFSEMASACSLLQDWRTTTLLISMME-----LSVGLLNNVLYSIGKS 170
           E M+ K IPFSD IF EM SACS+LQDWRT   +I  +E     +S G LN  L+S+GKS
Sbjct: 667 ESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSLGKS 726

Query: 171 GKIEIMMKLYYKIVASGTEINFSTYTILLKNLLAAGNWRKYIEV 302
           GKIE M+KL++K++ASG ++N +TY+ILLKNLL++GNWRKY+EV
Sbjct: 727 GKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEV 770