BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005966
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
emb|CBI29835.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002529506.1| pentatricopeptide repeat-containing protein,...    86   3e-15
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/72 (54%), Positives = 57/72 (79%)
 Frame = +3

Query: 42  MKRAGYCPDSIAFTTMLHAYSAAEDGDKAFALFQDMVVAEVQLDSISCSALMRAFNKGHQ 221
           MK +G  PD + +T ML AY+AAE+ +KA+ALF++M  + ++LD+I+C+ALMR+FNKG Q
Sbjct: 599 MKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQ 658

Query: 222 PARVLSVVEFMK 257
           P RVLS+ E M+
Sbjct: 659 PGRVLSLAESMR 670


>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = +3

Query: 39  QMKRAGYCPDSIAFTTMLHAYSAAEDGDKAFALFQDMVVAEVQLDSISCSALMRAFNKGH 218
           +MK  G  PD I +T M+HAY  AE+ +KA ALF +M   +VQ DSI+CS+LMRAFNKG 
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGG 668

Query: 219 QPARVLSVVEFMK 257
           QPA+VL + EFM+
Sbjct: 669 QPAKVLVLAEFMR 681


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = +3

Query: 39  QMKRAGYCPDSIAFTTMLHAYSAAEDGDKAFALFQDMVVAEVQLDSISCSALMRAFNKGH 218
           +MK  G  PD I +T M+HAY  AE+ +KA ALF +M   +VQ DSI+CS+LMRAFNKG 
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGG 668

Query: 219 QPARVLSVVEFMK 257
           QPA+VL + EFM+
Sbjct: 669 QPAKVLVLAEFMR 681


>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 808

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/72 (59%), Positives = 52/72 (72%)
 Frame = +3

Query: 42  MKRAGYCPDSIAFTTMLHAYSAAEDGDKAFALFQDMVVAEVQLDSISCSALMRAFNKGHQ 221
           MK AG CPD I FT MLHAY+A E   KA  L Q+M   ++QLD+I+CSALMRAFNK   
Sbjct: 591 MKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGN 650

Query: 222 PARVLSVVEFMK 257
           P++VL + EFMK
Sbjct: 651 PSQVLILAEFMK 662


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = +3

Query: 39  QMKRAGYCPDSIAFTTMLHAYSAAEDGDKAFALFQDMVVAEVQLDSISCSALMRAFNKGH 218
           +MK AG  PD + +T MLHAY+AAE   KA AL Q+M    +Q D+I+CSALMRAFNKG 
Sbjct: 574 KMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGG 633

Query: 219 QPARVLSVVEFMK 257
            P++VL + EFM+
Sbjct: 634 DPSKVLILAEFMR 646