BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005961
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   191   7e-47
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...   187   8e-46
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]                 187   8e-46
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...   187   8e-46
emb|CBI39142.3| unnamed protein product [Vitis vinifera]              187   1e-45

>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score =  191 bits (484), Expect = 7e-47
 Identities = 87/109 (79%), Positives = 103/109 (94%)
 Frame = +1

Query: 1   YDRVTDRSRGFAFVTMASVEEAKEAIRMFNGSQVGGRTVKVNFPEVPRGGEREVMGPKIR 180
           YD+VTDRSRGFAFVTMA++EEAKEAIRMF+GSQ+GGRTV+VNFPEVPRGGE+EVMGP+IR
Sbjct: 148 YDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIR 207

Query: 181 NSYQSFVDSPHKLYAGNLSWSVTSQTLREVFEDQPGLLSAKVIYDRQSG 327
           +SY  FVDSPHK+YAGNL W +TSQ+LR+ FE+QPG+LSAK+IYDR SG
Sbjct: 208 SSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASG 256


>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
           precursor - common tobacco gi|20005|emb|CAA37879.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/109 (82%), Positives = 98/109 (89%)
 Frame = +1

Query: 1   YDRVTDRSRGFAFVTMASVEEAKEAIRMFNGSQVGGRTVKVNFPEVPRGGEREVMGPKIR 180
           YDRVTDRSRGFAFVTM SVEEAKEAIR+F+GSQVGGRTVKVNFPEVPRGGEREVM  KIR
Sbjct: 147 YDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIR 206

Query: 181 NSYQSFVDSPHKLYAGNLSWSVTSQTLREVFEDQPGLLSAKVIYDRQSG 327
           ++YQ FVDSPHKLY  NLSW++TSQ LR+ F DQPG +SAKVIYDR SG
Sbjct: 207 STYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSG 255


>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
          Length = 292

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/109 (82%), Positives = 98/109 (89%)
 Frame = +1

Query: 1   YDRVTDRSRGFAFVTMASVEEAKEAIRMFNGSQVGGRTVKVNFPEVPRGGEREVMGPKIR 180
           YDRVTDRSRGFAFVTM SVEEAKEAIR+F+GSQVGGRTVKVNFPEVPRGGEREVM  KIR
Sbjct: 136 YDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIR 195

Query: 181 NSYQSFVDSPHKLYAGNLSWSVTSQTLREVFEDQPGLLSAKVIYDRQSG 327
           ++YQ FVDSPHKLY  NLSW++TSQ LR+ F DQPG +SAKVIYDR SG
Sbjct: 196 STYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSG 244


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/109 (82%), Positives = 98/109 (89%)
 Frame = +1

Query: 1   YDRVTDRSRGFAFVTMASVEEAKEAIRMFNGSQVGGRTVKVNFPEVPRGGEREVMGPKIR 180
           YDRVTDRSRGFAFVTM SVEEAKEAIR+F+GSQVGGRTVKVNFPEVPRGGEREVM  KIR
Sbjct: 142 YDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIR 201

Query: 181 NSYQSFVDSPHKLYAGNLSWSVTSQTLREVFEDQPGLLSAKVIYDRQSG 327
           ++YQ FVDSPHKLY  NLSW++TSQ LR+ F DQPG +SAKVIYDR SG
Sbjct: 202 STYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSG 250


>emb|CBI39142.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/109 (81%), Positives = 100/109 (91%)
 Frame = +1

Query: 1   YDRVTDRSRGFAFVTMASVEEAKEAIRMFNGSQVGGRTVKVNFPEVPRGGEREVMGPKIR 180
           YDRVTDRSRGFAFVTM SV+EAKEAIRMF+GSQVGGRTVKVNFPEVPRGGER VMGPKIR
Sbjct: 23  YDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIR 82

Query: 181 NSYQSFVDSPHKLYAGNLSWSVTSQTLREVFEDQPGLLSAKVIYDRQSG 327
           +SY+ FVDSP+K+YAGNLSW +TS+ LR+ F D PGLL AKVIY+R+SG
Sbjct: 83  SSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESG 131