BLASTX nr result

ID: Bupleurum21_contig00005959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005959
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555609.1| PREDICTED: uncharacterized protein LOC100792...    96   3e-18
ref|XP_003626260.1| DNA (cytosine-5)-methyltransferase 3A [Medic...    96   4e-18
ref|XP_002512413.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_003535335.1| PREDICTED: uncharacterized protein LOC100812...    93   3e-17
ref|NP_198117.2| PWWP domain-containing protein [Arabidopsis tha...    92   6e-17

>ref|XP_003555609.1| PREDICTED: uncharacterized protein LOC100792700 [Glycine max]
          Length = 1056

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = -3

Query: 227 EVVKFSVVSRYEEVLDEFDEYAASARGGVVESPPGHGYEIGDMVWGKVKSHPWWPGHIYS 48
           E+ +FS  S  + +L EFD+Y A+   G      GHG+EIGDMVWGKVKSHPWWPGHIY+
Sbjct: 71  ELARFSN-SEVKSLLSEFDDYVAA---GGASRNVGHGFEIGDMVWGKVKSHPWWPGHIYN 126

Query: 47  EVFASPSVRRTKSEG 3
           E FAS +VRRTK EG
Sbjct: 127 EAFASSAVRRTKREG 141


>ref|XP_003626260.1| DNA (cytosine-5)-methyltransferase 3A [Medicago truncatula]
           gi|124360021|gb|ABN08037.1| PWWP [Medicago truncatula]
           gi|355501275|gb|AES82478.1| DNA
           (cytosine-5)-methyltransferase 3A [Medicago truncatula]
          Length = 1114

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
 Frame = -3

Query: 230 VEVVKFSVVSRYEEVLDEFDEYAASARGGVVESPP--GHGYEIGDMVWGKVKSHPWWPGH 57
           V+  KFS   R + +L EFDEY AS R    E+    G+G+E+GD+VWGKVKSHPWWPGH
Sbjct: 48  VDTEKFSGSDR-KSLLMEFDEYVASERNTEPETETDLGYGFEVGDLVWGKVKSHPWWPGH 106

Query: 56  IYSEVFASPSVRRTKSEG 3
           IY++ FASPSVRR + EG
Sbjct: 107 IYNQAFASPSVRRARREG 124


>ref|XP_002512413.1| conserved hypothetical protein [Ricinus communis]
           gi|223548374|gb|EEF49865.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1141

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
 Frame = -3

Query: 206 VSRYEEVLDEFDEYAASARGGVVESPP---GHGYEIGDMVWGKVKSHPWWPGHIYSEVFA 36
           V  Y  +L EFD++ A+ + G +E       +G+E+GDMVWGKVKSHPWWPGHI++EVFA
Sbjct: 126 VEVYSSLLSEFDDFVANEKHGAMEGACRALSYGFEVGDMVWGKVKSHPWWPGHIFNEVFA 185

Query: 35  SPSVRRTKSEG 3
           S SVRRT+ EG
Sbjct: 186 SSSVRRTRREG 196


>ref|XP_003535335.1| PREDICTED: uncharacterized protein LOC100812480 [Glycine max]
          Length = 1045

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/67 (64%), Positives = 48/67 (71%)
 Frame = -3

Query: 203 SRYEEVLDEFDEYAASARGGVVESPPGHGYEIGDMVWGKVKSHPWWPGHIYSEVFASPSV 24
           S    +L EFD Y A+   G      GHG+EIGDMVWGKVKSHPWWPGHIY+E FAS +V
Sbjct: 59  SEVNSLLSEFDGYVAA---GGASRNVGHGFEIGDMVWGKVKSHPWWPGHIYNEAFASSAV 115

Query: 23  RRTKSEG 3
           RRTK EG
Sbjct: 116 RRTKREG 122


>ref|NP_198117.2| PWWP domain-containing protein [Arabidopsis thaliana]
           gi|332006328|gb|AED93711.1| PWWP domain-containing
           protein [Arabidopsis thaliana]
          Length = 1072

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -3

Query: 206 VSRYEEVLDEFDEYAASAR-GGVVESPPGHGYEIGDMVWGKVKSHPWWPGHIYSEVFASP 30
           VS Y+ +L EFD+Y AS + G  V     +G+E+GD+VWGKVKSHPWWPGHI++E FASP
Sbjct: 140 VSDYKSLLSEFDDYVASEKMGSGVSRALSYGFEVGDLVWGKVKSHPWWPGHIFNEAFASP 199

Query: 29  SVRRTK 12
           SVRR +
Sbjct: 200 SVRRMR 205


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