BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005958
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20486.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...    80   2e-13
ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|1...    75   6e-12
ref|XP_002864348.1| 50S ribosomal protein L24, chloroplast [Arab...    71   8e-11
ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...    71   8e-11

>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/59 (67%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = +2

Query: 119 LQTCFTTLSISSSNSFLGARFYPLSPPQV-KSVQQPCPIIMKLKRWERKKCKPNSLPVL 292
           LQ+ FT+LS+SS NSFLG  F PL  P + KS ++PCPI+M+LKRWERK+CKPNSLPVL
Sbjct: 52  LQSSFTSLSLSS-NSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSLPVL 109


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/59 (67%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = +2

Query: 119 LQTCFTTLSISSSNSFLGARFYPLSPPQV-KSVQQPCPIIMKLKRWERKKCKPNSLPVL 292
           LQ+ FT+LS+SS NSFLG  F PL  P + KS ++PCPI+M+LKRWERK+CKPNSLPVL
Sbjct: 7   LQSSFTSLSLSS-NSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSLPVL 64


>ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|118484624|gb|ABK94184.1|
           unknown [Populus trichocarpa]
           gi|222857643|gb|EEE95190.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = +2

Query: 119 LQTCFTTLSISSSNSFLGARFY--PLSPPQVKSVQQPCPIIMKLKRWERKKCKPNSLPVL 292
           LQ+   TLS+SSSNSF G R     LS PQVKS ++PC I++K+KRWERK+CK NSLPVL
Sbjct: 7   LQSSMATLSLSSSNSFFGQRLSLPSLSFPQVKSPEKPCLIVVKIKRWERKECKENSLPVL 66


>ref|XP_002864348.1| 50S ribosomal protein L24, chloroplast [Arabidopsis lyrata subsp.
           lyrata] gi|297310183|gb|EFH40607.1| 50S ribosomal
           protein L24, chloroplast [Arabidopsis lyrata subsp.
           lyrata]
          Length = 198

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
 Frame = +2

Query: 113 SILQTCFTTLSISSSNSFLGARFY-PLS---PPQVKSVQQPCPIIMKLKRWERKKCKPNS 280
           S LQ+ FT+LS+SS++SFLG R   P+S      VK  + PC ++ KLKRWERK+CKPNS
Sbjct: 5   SALQSSFTSLSLSSNSSFLGQRLISPISLSVASPVKPAENPCLVLAKLKRWERKECKPNS 64

Query: 281 LPVL 292
           LP+L
Sbjct: 65  LPIL 68


>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
 Frame = +2

Query: 119 LQTCFTTLSISSSNSFLGARFYPLSPPQV---KSVQQPCPIIMKLKRWERKKCKPNSLPV 289
           LQ+    LS+SS NSFLG R  P++ P +   KS ++ CPI+M+LKRWERK+CKPNSLP+
Sbjct: 7   LQSSMVGLSLSS-NSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPI 65

Query: 290 L 292
           L
Sbjct: 66  L 66