BLASTX nr result

ID: Bupleurum21_contig00005949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005949
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319455.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
ref|XP_002532255.1| sentrin/sumo-specific protease, senp8, putat...   126   3e-27
emb|CAN67573.1| hypothetical protein VITISV_012458 [Vitis vinifera]   122   8e-26
emb|CBI16253.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_004149559.1| PREDICTED: NEDD8-specific protease 1-like [C...   115   8e-24

>ref|XP_002319455.1| predicted protein [Populus trichocarpa] gi|222857831|gb|EEE95378.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  140 bits (352), Expect = 3e-31
 Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
 Frame = +2

Query: 152 MGDKKV---YKCGDIVVRHCDLDTLEGPRLLNDQIIAFYFTYLSSSFNTKTKTDTLLVTP 322
           M DK++   YK  D+V+R  DL+ L+GP  LNDQII FYF YLSSS+N     D LLV P
Sbjct: 1   MDDKEIVLSYK--DVVLRVSDLNILKGPCYLNDQIIDFYFAYLSSSYNADAN-DILLVPP 57

Query: 323 SISLWIANCGDDKS-VEDYVQSCEMSSKRLVLFVIXXXXXXXXXXXXXHWSILVYDRMKN 499
           S S W ANC D +S V D+V+  + SSK+L+LF +             HWS+LVYDR +N
Sbjct: 58  STSYWFANCQDQQSLVNDFVEPLKFSSKKLILFTVNDNEDFSAAERGTHWSLLVYDRSQN 117

Query: 500 LFLHFDSIKGLNNPYAVKLYDALKQFMGPGGE 595
            FLHFDS+ G++  +A+KLY A+K FMG   E
Sbjct: 118 YFLHFDSLPGMHRYHALKLYKAVKGFMGTASE 149


>ref|XP_002532255.1| sentrin/sumo-specific protease, senp8, putative [Ricinus communis]
           gi|223528043|gb|EEF30121.1| sentrin/sumo-specific
           protease, senp8, putative [Ricinus communis]
          Length = 228

 Score =  126 bits (317), Expect = 3e-27
 Identities = 58/142 (40%), Positives = 94/142 (66%)
 Frame = +2

Query: 158 DKKVYKCGDIVVRHCDLDTLEGPRLLNDQIIAFYFTYLSSSFNTKTKTDTLLVTPSISLW 337
           D+K+    D+V+R  DLD L GP  LND+II FYF+YLSSS  ++   D +L++PS++ W
Sbjct: 7   DEKILSYNDVVLRRSDLDILNGPYFLNDRIIEFYFSYLSSSHPSE---DIILLSPSVAFW 63

Query: 338 IANCGDDKSVEDYVQSCEMSSKRLVLFVIXXXXXXXXXXXXXHWSILVYDRMKNLFLHFD 517
           I+NC D +S++D+++  ++  K+LV+F +             HWS+LVY+R  N+F+H D
Sbjct: 64  ISNCLDTESLKDFLEPLKLPDKKLVMFPVNNNEDVNLAEGGSHWSLLVYERSCNVFVHHD 123

Query: 518 SIKGLNNPYAVKLYDALKQFMG 583
           S  G N  +A++LY A+ +++G
Sbjct: 124 SYSGTNKRHALQLYKAVARYIG 145


>emb|CAN67573.1| hypothetical protein VITISV_012458 [Vitis vinifera]
          Length = 294

 Score =  122 bits (305), Expect = 8e-26
 Identities = 60/142 (42%), Positives = 85/142 (59%)
 Frame = +2

Query: 158 DKKVYKCGDIVVRHCDLDTLEGPRLLNDQIIAFYFTYLSSSFNTKTKTDTLLVTPSISLW 337
           D  +    D+V+R  DLD L GPR LND++I FYF+YL+S + +    D  LV PSI+ W
Sbjct: 79  DDMILSYNDVVLRRSDLDILSGPRFLNDRLIEFYFSYLTSCYPSP---DISLVPPSIAFW 135

Query: 338 IANCGDDKSVEDYVQSCEMSSKRLVLFVIXXXXXXXXXXXXXHWSILVYDRMKNLFLHFD 517
           I NC D  S+ D+++  ++S K+LV+F I             HWS+L ++   N+F+H D
Sbjct: 136 IMNCPDTGSLRDFIEPLKLSEKKLVIFPINNNDDVEQAEGGTHWSLLAFEENANVFVHHD 195

Query: 518 SIKGLNNPYAVKLYDALKQFMG 583
           S  GLN  +A KLY A+  FMG
Sbjct: 196 SCGGLNEAHARKLYKAVVGFMG 217


>emb|CBI16253.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  120 bits (300), Expect = 3e-25
 Identities = 59/142 (41%), Positives = 84/142 (59%)
 Frame = +2

Query: 158 DKKVYKCGDIVVRHCDLDTLEGPRLLNDQIIAFYFTYLSSSFNTKTKTDTLLVTPSISLW 337
           D  +    D+V+R  DLD L GP  LND++I FYF+YL+S + +    D  LV PSI+ W
Sbjct: 7   DDMILSYNDVVLRRSDLDILSGPHFLNDRLIEFYFSYLTSCYPSP---DISLVPPSIAFW 63

Query: 338 IANCGDDKSVEDYVQSCEMSSKRLVLFVIXXXXXXXXXXXXXHWSILVYDRMKNLFLHFD 517
           I NC D  S+ D+++  ++S K+LV+F I             HWS+L ++   N+F+H D
Sbjct: 64  IMNCPDTGSLRDFIEPLKLSEKKLVIFPINNNDDVEQAEGGTHWSLLAFEENANVFVHHD 123

Query: 518 SIKGLNNPYAVKLYDALKQFMG 583
           S  GLN  +A KLY A+  FMG
Sbjct: 124 SCGGLNEAHARKLYKAVVGFMG 145


>ref|XP_004149559.1| PREDICTED: NEDD8-specific protease 1-like [Cucumis sativus]
           gi|449533234|ref|XP_004173581.1| PREDICTED:
           NEDD8-specific protease 1-like [Cucumis sativus]
          Length = 236

 Score =  115 bits (288), Expect = 8e-24
 Identities = 57/145 (39%), Positives = 85/145 (58%)
 Frame = +2

Query: 155 GDKKVYKCGDIVVRHCDLDTLEGPRLLNDQIIAFYFTYLSSSFNTKTKTDTLLVTPSISL 334
           GD+K+    D+V+R  DL+ L GP  LND+II FYF+YLS+   T      LL  PSI+ 
Sbjct: 6   GDEKILSYNDVVLRKSDLEILSGPYFLNDRIIEFYFSYLST---THPSNGILLSPPSIAF 62

Query: 335 WIANCGDDKSVEDYVQSCEMSSKRLVLFVIXXXXXXXXXXXXXHWSILVYDRMKNLFLHF 514
           W+ NC D +S+  +++   +  K+LV+F +             HWS+L + R  N+F+H 
Sbjct: 63  WMMNCPDVESLNSFLEPLNLPHKKLVIFPVNDNIDVSKPEGGNHWSLLAFYREANIFVHH 122

Query: 515 DSIKGLNNPYAVKLYDALKQFMGPG 589
           DS KG+N   A +LY+A+ +FM  G
Sbjct: 123 DSNKGMNKYAAKRLYNAVARFMNDG 147


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