BLASTX nr result

ID: Bupleurum21_contig00005939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005939
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156028.1| PREDICTED: large subunit GTPase 1 homolog [C...   158   4e-37
ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [C...   158   4e-37
ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyra...   152   4e-35
ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C...   150   8e-35
ref|XP_002513727.1| GTP binding protein, putative [Ricinus commu...   150   8e-35

>ref|XP_004156028.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 361

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/126 (61%), Positives = 95/126 (75%)
 Frame = +2

Query: 11  MGKTEKTSLGRSLVRHHNNMIQQSKDKGKIYKTQQKKVLESVTEVTDIEAVIEQADEAEL 190
           MGK +K  LGR+LV+ HN MIQQSK+KG+ YK+QQKKVLESVTEV+DI+AVI+QADEAE 
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 191 LYTAENAAVNLKIDMDSSGNTIDMTPXXXXXXXXXXXXLHASSLRVPRRPPWNAKMSVEE 370
           L++ +N   N  I++D S +  +MTP            LHASSLRVPRRPPWNA+MS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 371 LDTNER 388
           LD NER
Sbjct: 121 LDDNER 126


>ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/126 (61%), Positives = 95/126 (75%)
 Frame = +2

Query: 11  MGKTEKTSLGRSLVRHHNNMIQQSKDKGKIYKTQQKKVLESVTEVTDIEAVIEQADEAEL 190
           MGK +K  LGR+LV+ HN MIQQSK+KG+ YK+QQKKVLESVTEV+DI+AVI+QADEAE 
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 191 LYTAENAAVNLKIDMDSSGNTIDMTPXXXXXXXXXXXXLHASSLRVPRRPPWNAKMSVEE 370
           L++ +N   N  I++D S +  +MTP            LHASSLRVPRRPPWNA+MS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 371 LDTNER 388
           LD NER
Sbjct: 121 LDDNER 126


>ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335533|gb|EFH65950.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = +2

Query: 11  MGKTEKTSLGRSLVRHHNNMIQQSKDKGKIYKTQQKKVLESVTEVTDIEAVIEQADEAEL 190
           MGK+EKTSLGRSLV+HHN+MIQ+SKDKGK YK  QKKVLESVTEV+DI+A+IEQA+EAE 
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 191 LYTA-ENAAVNLKIDMDSSGNTIDMTPXXXXXXXXXXXXLHASSLRVPRRPPWNAKMSVE 367
           LYT   +++  L I++D++ ++  + P            LHASSL+VPRRPPW  +MSVE
Sbjct: 61  LYTINHSSSTPLSINLDTNSSSSVIAPEEWREQQKIEEALHASSLQVPRRPPWTPEMSVE 120

Query: 368 ELDTNER 388
           ELD NE+
Sbjct: 121 ELDANEK 127


>ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/126 (59%), Positives = 93/126 (73%)
 Frame = +2

Query: 11  MGKTEKTSLGRSLVRHHNNMIQQSKDKGKIYKTQQKKVLESVTEVTDIEAVIEQADEAEL 190
           M + +K  LGR+LV+ HN MIQQSK+KG+ YK+QQKKVLESVTEV+DI+AVI+QADEAE 
Sbjct: 1   MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 191 LYTAENAAVNLKIDMDSSGNTIDMTPXXXXXXXXXXXXLHASSLRVPRRPPWNAKMSVEE 370
           L++ +N   N  I++D S +  +MT             LHASSLRVPRRPPWNA+MS EE
Sbjct: 61  LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 371 LDTNER 388
           LD NER
Sbjct: 121 LDDNER 126


>ref|XP_002513727.1| GTP binding protein, putative [Ricinus communis]
           gi|223547178|gb|EEF48674.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 596

 Score =  150 bits (380), Expect = 8e-35
 Identities = 80/129 (62%), Positives = 96/129 (74%), Gaps = 3/129 (2%)
 Frame = +2

Query: 11  MGKTEKTSLGRSLVRHHNNMIQQSKDKGKIYKTQQKKVLESVTEVTDIEAVIEQADEAEL 190
           MGK EKT LGR+LV+HHN MIQQSK+KG+ Y +  KKVLESVTEV+DI+AVIEQA+EA+L
Sbjct: 1   MGKNEKTKLGRALVKHHNQMIQQSKEKGRYYNSLHKKVLESVTEVSDIDAVIEQAEEADL 60

Query: 191 LYTAE--NAAVNLKIDMD-SSGNTIDMTPXXXXXXXXXXXXLHASSLRVPRRPPWNAKMS 361
           L++ +   AA N  I +D SS    DMTP            LHASSLRVPRRPPWNA+MS
Sbjct: 61  LFSHQLPAAAPNQPISLDVSSSGISDMTPKERREQQKKEEALHASSLRVPRRPPWNAEMS 120

Query: 362 VEELDTNER 388
           +EELD NE+
Sbjct: 121 IEELDDNEK 129


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