BLASTX nr result

ID: Bupleurum21_contig00005938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005938
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   328   5e-88
gb|AEL98998.1| P-loop containing nucleoside triphosphate hydrola...   321   1e-85
gb|AEL98999.1| P-loop containing nucleoside triphosphate hydrola...   318   8e-85
ref|XP_003605987.1| Large subunit GTPase-like protein [Medicago ...   317   1e-84
ref|XP_003543409.1| PREDICTED: large subunit GTPase 1 homolog [G...   317   1e-84

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  328 bits (842), Expect = 5e-88
 Identities = 168/241 (69%), Positives = 190/241 (78%), Gaps = 13/241 (5%)
 Frame = -3

Query: 686 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTLLLINK 507
           LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYA+E+DEHK+TLLL+NK
Sbjct: 147 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAQEIDEHKKTLLLVNK 206

Query: 506 ADLLPHYIREKWVKYFRLHGILFVFWSAKVASAVAEGKELPT--EMLNGHDESVDADTRV 333
           ADLLP  +RE+W KYFRLHGILF+FWSAK ASA  EGK+L    E      E+ DADT++
Sbjct: 207 ADLLPFSVRERWAKYFRLHGILFIFWSAKAASAALEGKKLNVQWETQKPLQETDDADTKI 266

Query: 332 YGREELLARLQSEAEEIATMRKARXXXXXXXXXXXSGEVSQRYVKFNG-----------V 186
           YGR+ELLARLQSEAEEI+  ++             S      +V+F+G           V
Sbjct: 267 YGRDELLARLQSEAEEISVRKR----------KSSSSSTDSSHVQFHGGHVAGNSTSRSV 316

Query: 185 TVGFVGYPNVGKSSTINALVGEKKTGVTHTPGKTKHFQTIIISDKLTLCDCPGLVFPSFT 6
            VGFVGYPNVGKSSTINALVGEK+TGVT TPGKTKHFQT+IISD+LTLCDCPGLVFPSF+
Sbjct: 317 VVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFS 376

Query: 5   S 3
           S
Sbjct: 377 S 377


>gb|AEL98998.1| P-loop containing nucleoside triphosphate hydrolase-like protein,
           partial [Silene latifolia]
          Length = 502

 Score =  321 bits (822), Expect = 1e-85
 Identities = 167/231 (72%), Positives = 180/231 (77%), Gaps = 3/231 (1%)
 Frame = -3

Query: 686 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTLLLINK 507
           LTPFEKNLDIWRQLWRV+ERSDLLVMVVDARDPLFYRCPDLE Y KEVDEHKRT+LLINK
Sbjct: 117 LTPFEKNLDIWRQLWRVVERSDLLVMVVDARDPLFYRCPDLEVYVKEVDEHKRTMLLINK 176

Query: 506 ADLLPHYIREKWVKYFRLHGILFVFWSAKVASAVAEGKELPTEMLNGHD---ESVDADTR 336
           ADLLPH IR KW KYF  + ILF+FWSAK A+A  EGK LP+  L+  D   ES D DT+
Sbjct: 177 ADLLPHAIRLKWAKYFNDNDILFLFWSAKAATATLEGKNLPS--LDNEDTLQESEDIDTK 234

Query: 335 VYGREELLARLQSEAEEIATMRKARXXXXXXXXXXXSGEVSQRYVKFNGVTVGFVGYPNV 156
           VYGR+ELLARLQ EAEEI  +RK+               V         VTVGFVGYPNV
Sbjct: 235 VYGRDELLARLQFEAEEITRLRKS------------GSNVGNAGTNSASVTVGFVGYPNV 282

Query: 155 GKSSTINALVGEKKTGVTHTPGKTKHFQTIIISDKLTLCDCPGLVFPSFTS 3
           GKSSTINALVG K+ GVT TPGKTKHFQT+IISDKLTLCDCPGLVFPSFTS
Sbjct: 283 GKSSTINALVGLKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFTS 333


>gb|AEL98999.1| P-loop containing nucleoside triphosphate hydrolase-like protein,
           partial [Silene latifolia]
          Length = 502

 Score =  318 bits (814), Expect = 8e-85
 Identities = 166/231 (71%), Positives = 179/231 (77%), Gaps = 3/231 (1%)
 Frame = -3

Query: 686 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTLLLINK 507
           LTPFEKNLDIWRQLWRV+ERSDLLVMVVDARDPLFYRCPDLE Y KEVDEHKRT+LLINK
Sbjct: 117 LTPFEKNLDIWRQLWRVVERSDLLVMVVDARDPLFYRCPDLEVYVKEVDEHKRTILLINK 176

Query: 506 ADLLPHYIREKWVKYFRLHGILFVFWSAKVASAVAEGKELPTEMLNGHD---ESVDADTR 336
           ADLLPH IR KW KYF  + ILF+FWSAK A+A  EGK LP+  L+  D   E+ D DT+
Sbjct: 177 ADLLPHAIRLKWAKYFNDNDILFLFWSAKAATATLEGKNLPS--LDNEDTLQETEDIDTK 234

Query: 335 VYGREELLARLQSEAEEIATMRKARXXXXXXXXXXXSGEVSQRYVKFNGVTVGFVGYPNV 156
           VYGR+ELLARLQ EAEEI  +RK+               V         VTVGFVGYPNV
Sbjct: 235 VYGRDELLARLQFEAEEITRLRKS------------GSNVGNAGTNSASVTVGFVGYPNV 282

Query: 155 GKSSTINALVGEKKTGVTHTPGKTKHFQTIIISDKLTLCDCPGLVFPSFTS 3
           GKSSTINALVG K  GVT TPGKTKHFQT+IISDKLTLCDCPGLVFPSFTS
Sbjct: 283 GKSSTINALVGLKCAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFTS 333


>ref|XP_003605987.1| Large subunit GTPase-like protein [Medicago truncatula]
           gi|355507042|gb|AES88184.1| Large subunit GTPase-like
           protein [Medicago truncatula]
          Length = 589

 Score =  317 bits (813), Expect = 1e-84
 Identities = 158/228 (69%), Positives = 179/228 (78%)
 Frame = -3

Query: 686 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTLLLINK 507
           LTPFEKNLDIWRQLWRV+ERSDLLVMVVD+RDPLFYRCPDLEAYAKEVD HK TLLL+NK
Sbjct: 149 LTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKNTLLLVNK 208

Query: 506 ADLLPHYIREKWVKYFRLHGILFVFWSAKVASAVAEGKELPTEMLNGHDESVDADTRVYG 327
           ADLLP  +REKW +YFR H ILF+FWSAK A+AV EGK+L +   +    + + DT++YG
Sbjct: 209 ADLLPASVREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGSSQADNMASADNPDTKIYG 268

Query: 326 REELLARLQSEAEEIATMRKARXXXXXXXXXXXSGEVSQRYVKFNGVTVGFVGYPNVGKS 147
           R+ELLARLQSEAE I  MR++                S        V VGFVGYPNVGKS
Sbjct: 269 RDELLARLQSEAEAIVDMRRSSGSSKSSDDNASVSSSSSH------VVVGFVGYPNVGKS 322

Query: 146 STINALVGEKKTGVTHTPGKTKHFQTIIISDKLTLCDCPGLVFPSFTS 3
           STINALVG+KKTGVT TPGKTKHFQT+IIS+KL LCDCPGLVFPSF+S
Sbjct: 323 STINALVGQKKTGVTSTPGKTKHFQTLIISEKLILCDCPGLVFPSFSS 370


>ref|XP_003543409.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 573

 Score =  317 bits (812), Expect = 1e-84
 Identities = 159/229 (69%), Positives = 182/229 (79%), Gaps = 1/229 (0%)
 Frame = -3

Query: 686 LTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTLLLINK 507
           LTPFEKNLDIWRQLWRV+ERSDLLVMVVD+RDPLFYRCPDLEAYA+EVDEHKRTLLL+NK
Sbjct: 140 LTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNK 199

Query: 506 ADLLPHYIREKWVKYFRLHGILFVFWSAKVASAVAEGKELPTEM-LNGHDESVDADTRVY 330
           ADLLP  +REKWV+YF  H IL++FWSAK ASA  EGK   + +  +   ++ + DT +Y
Sbjct: 200 ADLLPASVREKWVEYFHAHNILYIFWSAKAASAAVEGKMFRSPLEADDSGKNNNPDTEIY 259

Query: 329 GREELLARLQSEAEEIATMRKARXXXXXXXXXXXSGEVSQRYVKFNGVTVGFVGYPNVGK 150
            R+ELLARLQSEAEEI  MR+             SGE        N V VGFVGYPNVGK
Sbjct: 260 DRDELLARLQSEAEEIVEMRRNSSSDTRPSNIHSSGENLAGSSSSNNVIVGFVGYPNVGK 319

Query: 149 SSTINALVGEKKTGVTHTPGKTKHFQTIIISDKLTLCDCPGLVFPSFTS 3
           SSTINALVG+K+TGVT TPGKTKHFQT+IIS+KLT+CDCPGLVFPSF+S
Sbjct: 320 SSTINALVGKKRTGVTSTPGKTKHFQTLIISNKLTVCDCPGLVFPSFSS 368


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