BLASTX nr result

ID: Bupleurum21_contig00005937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005937
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509634.1| multidrug resistance pump, putative [Ricinus...    77   1e-12
ref|XP_004147605.1| PREDICTED: MATE efflux family protein LAL5-l...    72   4e-11
ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-l...    69   3e-10
ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002509634.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549533|gb|EEF51021.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 506

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
 Frame = +2

Query: 68  EEKVQGFASTSSD----LAPKWSGNLMEIAVSEIKKQRGIAVPLVIMNIIWFMKLAITTA 235
           EE   G  S SS      A KW  NL +I +SE++ QRG+A+PL+ MN+ WF K AITTA
Sbjct: 9   EENTVGKTSQSSPPHTLTAQKWPANLTQIVLSEMRTQRGMALPLLAMNLTWFAKTAITTA 68

Query: 236 FXXXXXXXXXXXXXXXFTFANVTGFSVL 319
           F               FTFANVTGFSVL
Sbjct: 69  FLGRLGELRLAGGTLGFTFANVTGFSVL 96


>ref|XP_004147605.1| PREDICTED: MATE efflux family protein LAL5-like [Cucumis sativus]
           gi|449520365|ref|XP_004167204.1| PREDICTED: MATE efflux
           family protein LAL5-like [Cucumis sativus]
          Length = 487

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +2

Query: 92  STSSDLAPKW-SGNLMEIAVSEIKKQRGIAVPLVIMNIIWFMKLAITTAFXXXXXXXXXX 268
           S SS    KW S + +   +SE+K QRGIA+PLV MN+ WF+K+AITTAF          
Sbjct: 12  SGSSPRITKWVSKDFINSIISELKLQRGIALPLVAMNLTWFVKIAITTAFLGRLGDLPLA 71

Query: 269 XXXXXFTFANVTGFSVL 319
                FTFANVTGFSVL
Sbjct: 72  AGTLGFTFANVTGFSVL 88


>ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|222841876|gb|EEE79423.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%)
 Frame = +2

Query: 98  SSDLAPKWSGNLMEIAVSEIKKQRGIAVPLVIMNIIWFMKLAITTAFXXXXXXXXXXXXX 277
           SS     W  NLM++ + EIK QRG+A+PL+ MN+ WF K AITTAF             
Sbjct: 5   SSPTTQIWPANLMQMILLEIKTQRGMALPLLAMNLTWFAKSAITTAFLGRLGELQLAGGA 64

Query: 278 XXFTFANVTGFSVL 319
             FTFAN TGFSVL
Sbjct: 65  LGFTFANFTGFSVL 78


>ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 511

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/68 (51%), Positives = 43/68 (63%)
 Frame = +2

Query: 116 KWSGNLMEIAVSEIKKQRGIAVPLVIMNIIWFMKLAITTAFXXXXXXXXXXXXXXXFTFA 295
           K   N++ + VSE++ QRGIA+P+V MN+ WF K AITTAF               FTFA
Sbjct: 32  KCPANMVSMVVSELRIQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFA 91

Query: 296 NVTGFSVL 319
           NVTGFSVL
Sbjct: 92  NVTGFSVL 99


>ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = +2

Query: 131 LMEIAVSEIKKQRGIAVPLVIMNIIWFMKLAITTAFXXXXXXXXXXXXXXXFTFANVTGF 310
           LM+I + EIK QRGI +PL+ MN+ WF K AITT F               FTFANVTGF
Sbjct: 1   LMQIILQEIKTQRGITLPLLAMNLTWFSKTAITTVFLGRLGELQLVSGTLGFTFANVTGF 60

Query: 311 SVL 319
           SVL
Sbjct: 61  SVL 63


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