BLASTX nr result

ID: Bupleurum21_contig00005932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005932
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511740.1| conserved hypothetical protein [Ricinus comm...   219   2e-55
ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-55
gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossyp...   213   2e-53
ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...   212   3e-53
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...   212   3e-53

>ref|XP_002511740.1| conserved hypothetical protein [Ricinus communis]
           gi|223548920|gb|EEF50409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  219 bits (558), Expect = 2e-55
 Identities = 107/147 (72%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +2

Query: 8   VTATNITDVLSGYPEYSQFNTYLTQTKLADEINTRQTITVLVVSNGALAPLAGK-PLSVI 184
           +TA NITD+LSG+P+YS+FN YLTQTKLADEIN+R+TITVL +SNGA++ LA K PLSVI
Sbjct: 21  ITAHNITDILSGFPDYSEFNKYLTQTKLADEINSRETITVLALSNGAMSALASKHPLSVI 80

Query: 185 KNALSLHVLLDYFDAKKLHDVPDGSTLSTTLYQTTGNAQNKIGFVNITDLKGGRVGFGSG 364
           KNALSL VLLDY+D  KLH +  G+TLSTTLYQTTGNA   +GFVNITDL+GG+VGFGS 
Sbjct: 81  KNALSLLVLLDYYDPSKLHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSA 140

Query: 365 IAGSKLDSSYTKEIKQVPYNFSVVEIS 445
             GSKLDSSYTK +KQ+PYN SV+E+S
Sbjct: 141 APGSKLDSSYTKSVKQIPYNISVIEVS 167


>ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|222861509|gb|EEE99051.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  218 bits (554), Expect = 5e-55
 Identities = 108/149 (72%), Positives = 126/149 (84%), Gaps = 1/149 (0%)
 Frame = +2

Query: 2   AAVTATNITDVLSGYPEYSQFNTYLTQTKLADEINTRQTITVLVVSNGALAPLAGK-PLS 178
           + + A NITD+LSG+PEYS+FN YLTQTKLADEINTRQTITVL ++NGA+  LA K PLS
Sbjct: 19  STILAHNITDILSGFPEYSEFNKYLTQTKLADEINTRQTITVLALNNGAMTALAAKHPLS 78

Query: 179 VIKNALSLHVLLDYFDAKKLHDVPDGSTLSTTLYQTTGNAQNKIGFVNITDLKGGRVGFG 358
           VIKNALSL V+LDY+D  KLH +  G+TLSTTLYQTTGNA   +GFVNITDL+GG+VGFG
Sbjct: 79  VIKNALSLLVVLDYYDPTKLHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFG 138

Query: 359 SGIAGSKLDSSYTKEIKQVPYNFSVVEIS 445
           S   GSKLDSSYTK +KQVPYN S++EIS
Sbjct: 139 SAAPGSKLDSSYTKSVKQVPYNISILEIS 167


>gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossypium hirsutum]
          Length = 425

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/148 (68%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
 Frame = +2

Query: 5   AVTATNITDVLSGYPEYSQFNTYLTQTKLADEINTRQTITVLVVSNGALAPLAGK-PLSV 181
           AV   NIT +L G+P+YS +N++LTQTKLADEINTR+TIT LV++NGA++ L  K PLSV
Sbjct: 20  AVNGHNITAILEGFPDYSVYNSFLTQTKLADEINTRETITCLVLNNGAMSALTSKHPLSV 79

Query: 182 IKNALSLHVLLDYFDAKKLHDVPDGSTLSTTLYQTTGNAQNKIGFVNITDLKGGRVGFGS 361
           +KN LSLHVLLDY+D +KLH + DG+TL+TTLYQTTGNA   +GFVNITDL+GG+VGFGS
Sbjct: 80  VKNILSLHVLLDYYDPQKLHKISDGTTLTTTLYQTTGNAPGNLGFVNITDLQGGKVGFGS 139

Query: 362 GIAGSKLDSSYTKEIKQVPYNFSVVEIS 445
            I GSKLDSSYTK +KQ+PYN S++EIS
Sbjct: 140 AIPGSKLDSSYTKSVKQIPYNISILEIS 167


>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
           vinifera]
          Length = 416

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/148 (70%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
 Frame = +2

Query: 5   AVTATNITDVLSGYPEYSQFNTYLTQTKLADEINTRQTITVLVVSNGALAPLAGK-PLSV 181
           +V A NITD+LS +PEYS +N+YL+QTKLADEIN+RQT+T LV++N A++ LAGK PLSV
Sbjct: 17  SVRAHNITDMLSPFPEYSLYNSYLSQTKLADEINSRQTLTCLVLNNAAMSALAGKHPLSV 76

Query: 182 IKNALSLHVLLDYFDAKKLHDVPDGSTLSTTLYQTTGNAQNKIGFVNITDLKGGRVGFGS 361
           IK AL L V+LDY+D KKLH++ DG+TLSTTLYQTTGNA   +GFVNITDLKGG+VGFGS
Sbjct: 77  IKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGFGS 136

Query: 362 GIAGSKLDSSYTKEIKQVPYNFSVVEIS 445
              GSKLDSSYTK +KQ+PYN SV+EIS
Sbjct: 137 AAPGSKLDSSYTKSVKQIPYNISVLEIS 164


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/148 (70%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
 Frame = +2

Query: 5   AVTATNITDVLSGYPEYSQFNTYLTQTKLADEINTRQTITVLVVSNGALAPLAGK-PLSV 181
           +V A NITD+LS +PEYS +N+YL+QTKLADEIN+RQT+T LV++N A++ LAGK PLSV
Sbjct: 17  SVRAHNITDMLSPFPEYSLYNSYLSQTKLADEINSRQTLTCLVLNNAAMSALAGKHPLSV 76

Query: 182 IKNALSLHVLLDYFDAKKLHDVPDGSTLSTTLYQTTGNAQNKIGFVNITDLKGGRVGFGS 361
           IK AL L V+LDY+D KKLH++ DG+TLSTTLYQTTGNA   +GFVNITDLKGG+VGFGS
Sbjct: 77  IKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGFGS 136

Query: 362 GIAGSKLDSSYTKEIKQVPYNFSVVEIS 445
              GSKLDSSYTK +KQ+PYN SV+EIS
Sbjct: 137 AAPGSKLDSSYTKSVKQIPYNISVLEIS 164


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