BLASTX nr result

ID: Bupleurum21_contig00005911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005911
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|1...    79   4e-13
ref|XP_003632371.1| PREDICTED: uncharacterized protein LOC100246...    66   3e-09
ref|XP_002531872.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|118484370|gb|ABK94062.1|
           unknown [Populus trichocarpa]
           gi|222861406|gb|EEE98948.1| predicted protein [Populus
           trichocarpa]
          Length = 80

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -3

Query: 390 MKPQHLSKDGSLVRESKMTVGEKLRQAY-ATTMTVMVGDRTPNERQTKI--SKEIERRNG 220
           MKP +LS DGSL R++K T+ E+L+QA  A T+++ +      E  + +  SKEIERRN 
Sbjct: 1   MKPHNLSSDGSLPRDAKRTIAERLKQAIDAATVSMTMARNGAGEGNSALLYSKEIERRNW 60

Query: 219 RSGIEDPLRTMMFLGSWSHT 160
            S  EDP+RTMMFLGSW HT
Sbjct: 61  SSQAEDPIRTMMFLGSWGHT 80


>ref|XP_003632371.1| PREDICTED: uncharacterized protein LOC100246955 [Vitis vinifera]
          Length = 72

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/77 (46%), Positives = 44/77 (57%)
 Frame = -3

Query: 390 MKPQHLSKDGSLVRESKMTVGEKLRQAYATTMTVMVGDRTPNERQTKISKEIERRNGRSG 211
           MKP HL  DG      + TVGE+LR AY   +  +  +         I KEIERR   S 
Sbjct: 1   MKPTHLPGDGP-----QTTVGERLRLAYEAAVMAVARNWAVKGGGVPIPKEIERRKHCSA 55

Query: 210 IEDPLRTMMFLGSWSHT 160
            +DP+RTMMFLGSW+HT
Sbjct: 56  ADDPIRTMMFLGSWNHT 72


>ref|XP_002531872.1| conserved hypothetical protein [Ricinus communis]
           gi|223528480|gb|EEF30509.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/88 (50%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
 Frame = -3

Query: 390 MKPQH---LSKDGSLVR-ESKMTVGEKLRQAYATTMT-VMVGDRTPNERQTK-----ISK 241
           MKP     LS DGSL   ESK T GEKL+QAY +    V  G+ T     +       SK
Sbjct: 1   MKPHSHGCLSTDGSLTHHESKRTFGEKLKQAYESARNGVGKGNTTTASTASTANSLWFSK 60

Query: 240 EIERRNGRSGI-EDPLRTMMFLGSWSHT 160
           E ERRN  +   EDP+RTMMFLGSW HT
Sbjct: 61  ENERRNWTTYCAEDPIRTMMFLGSWGHT 88


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