BLASTX nr result
ID: Bupleurum21_contig00005878
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00005878 (1873 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 372 e-100 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 364 4e-98 dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 354 5e-95 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 354 5e-95 gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 353 7e-95 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 372 bits (955), Expect = e-100 Identities = 221/636 (34%), Positives = 344/636 (54%), Gaps = 13/636 (2%) Frame = +3 Query: 3 YNFRGINN--KMSFAKDFIHHNKLGLVALLETHVKQEMAQMVSHFVAPTFDWVYNYSYHP 176 +N RG NN S K ++ NK ++ETHVKQ + + + P + +V NY++ Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67 Query: 177 NGRLWLGWNAALWNISTISTSAQHISCNVRCLQSNAAFILTIVYGLHTCLDRRDLWNSLS 356 G++W+ W+ ++ + ++ S Q I+C V S + I+++VY + R++LW + Sbjct: 68 LGKIWVMWDPSV-QVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKELWIEI- 125 Query: 357 QTHEIITAGNSLSPWCIIGDFNTFLTHDE-SMGGSTNWTQSMLDFQNCLNSLGLTDLHSV 533 + +++ PW ++GDFN L E S S N +M DF++CL + L+DL Sbjct: 126 -VNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLRYK 184 Query: 534 GKQFTWWNCNPDRPVHRKLDRAIVNGDWLSTFSSSFAKFHPRGLSDHSLVIITLGATQQH 713 G FTWWN + PV +K+DR +VN W + F SS F SDH + L T Sbjct: 185 GNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSIK 244 Query: 714 ILKPFQIFQHLIDDPRFMDVVQTAWAS-NVQGDHWYVLTCKLKLVKNGLK---RLNQSRR 881 +PF+ F +L+ + F+++V+ W + NV G + ++ KLK +K +K RLN S Sbjct: 245 AKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSE- 303 Query: 882 NLQSEVAKAREDLLAFQASLPRAPSPSQYAIEESLMTALKKALHAEEIFLKQKSRVQWLK 1061 L+ +A + L+ Q P+P + E AEE F +QKSR+ W Sbjct: 304 -LEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQKSRISWFA 362 Query: 1062 SGDENNSYFFKSCRGRWNSNKIMELQDSNGVIYRDHAGISNTAVNYFKNLLGTRKEVNPF 1241 GD N YF + R +SN I L D NG + GI + +YF +LLG EV+P+ Sbjct: 363 EGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGD--EVDPY 420 Query: 1242 LHD------LALPRLSDVQRAGLDAPVSSAEILASFKGMANNKSPGPDGLTVEFFLAAWK 1403 L + L R S Q L++ S+ +I A+ + NKS GPDG T EFF+ +W Sbjct: 421 LMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWS 480 Query: 1404 IIGEDVTRAISSFFQSLQMPRMVNSTAISLIPKQSGPTELSQYRPISCCNVLYKSIAKIL 1583 I+G +VT AI FF S + + N+T I LIPK PT S +RPISC N LYK IA++L Sbjct: 481 IVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLL 540 Query: 1584 ANRLKPVMCSLISDCQSAFVSKRIIGDNIMLAQSLCRSYHLNSGAPKCAIKLDISKAFDS 1763 +RL+ ++ +IS QSAF+ R + +N++LA L Y+ ++ +P+ +K+D+ KAFDS Sbjct: 541 TDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDS 600 Query: 1764 LDWSFLFNVMEAMHFPEKFMNWIKCCISSCMYSIKV 1871 + W F+ + A+ PEKF+NWI CIS+ +++ + Sbjct: 601 VRWEFVIAALRALAIPEKFINWISQCISTPTFTVSI 636 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 364 bits (935), Expect = 4e-98 Identities = 212/635 (33%), Positives = 343/635 (54%), Gaps = 12/635 (1%) Frame = +3 Query: 3 YNFRGINNKM---SFAKDFIHHNKLGLVALLETHVKQEMAQMVSHFVAPTFDWVYNYSYH 173 +N RG NN + +F K F +K ++LET VK+ A+ P + V NY + Sbjct: 7 WNVRGFNNSVRRRNFRKWF-KLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFA 65 Query: 174 PNGRLWLGWNAALWNISTISTSAQHISCNVRCLQSNAAFILTIVYGLHTCLDRRDLWNSL 353 GR+W+ W+ A+ ++ +S S Q ISC V+ + F++T VY ++ RR LW+ L Sbjct: 66 ALGRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSEL 124 Query: 354 SQTHEIITAGNSLS--PWCIIGDFNTFLTHDESMGGSTNWTQSMLDFQNCLNSLGLTDLH 527 E++ A + S PW I+GDFN L ++ G + T+ M +F+ CL + ++DL Sbjct: 125 ----ELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLP 180 Query: 528 SVGKQFTWWNCNPDRPVHRKLDRAIVNGDWLSTFSSSFAKFHPRGLSDHSLVIITLGATQ 707 G +TWWN + P+ +K+DR +VN WL S+ F SDH + + Sbjct: 181 FRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQS 240 Query: 708 QHILKPFQIFQHLIDDPRFMDVVQTAWASNV-QGDHWYVLTCKLKLVKNGLKRLNQSRRN 884 KPF++ L+ P F++ ++ W QG + L+ K K +K ++ N+ + Sbjct: 241 GGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYS 300 Query: 885 -LQSEVAKAREDLLAFQASLPRAPSPSQYAIEESLMTALKKALHAEEIFLKQKSRVQWLK 1061 L+ V +A ++L Q +L APS +E+ + + AEE FL QKSRV WLK Sbjct: 301 GLEKRVVQAAQNLKTCQNNLLAAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLK 360 Query: 1062 SGDENNSYFFKSCRGRWNSNKIMELQDSNGVIYRDHAGISNTAVNYFKNLLGTRKEVNPF 1241 GD N ++F + R N+I L D G + + V++FK L G+ + Sbjct: 361 CGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISA 420 Query: 1242 -----LHDLALPRLSDVQRAGLDAPVSSAEILASFKGMANNKSPGPDGLTVEFFLAAWKI 1406 ++ L + + R L+A VS A+I + F + +NKSPGPDG T EFF W I Sbjct: 421 EGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSI 480 Query: 1407 IGEDVTRAISSFFQSLQMPRMVNSTAISLIPKQSGPTELSQYRPISCCNVLYKSIAKILA 1586 +G + A+ FF+S ++ NSTA++++PK+ ++++RPISCCN +YK I+K+LA Sbjct: 481 VGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLA 540 Query: 1587 NRLKPVMCSLISDCQSAFVSKRIIGDNIMLAQSLCRSYHLNSGAPKCAIKLDISKAFDSL 1766 RL+ ++ IS QSAFV R++ +N++LA L + + + + + +K+D+ KAFDS+ Sbjct: 541 RRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSV 600 Query: 1767 DWSFLFNVMEAMHFPEKFMNWIKCCISSCMYSIKV 1871 W F+ ++A + P +F+NWIK CI+S +SI V Sbjct: 601 GWGFIIETLKAANAPPRFVNWIKQCITSTSFSINV 635 >dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 910 Score = 354 bits (908), Expect = 5e-95 Identities = 216/632 (34%), Positives = 326/632 (51%), Gaps = 11/632 (1%) Frame = +3 Query: 3 YNFRGIN--NKMSFAKDFIHHNKLGLVALLETHVKQEMAQMVSHFVAPTFDWVYNYSYHP 176 +N RG+N N+ + +I N L + LETHV QE A V P + NY Sbjct: 6 WNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSNYCCSE 65 Query: 177 NGRLWLGWNAALWNISTISTSAQHISCNVRCLQSNAAFILTIVYGLHTCLDRRDLWNSLS 356 GR+W+ W+ ++ ++ + Q + C+++ +F + VYG ++ LDRR LW + Sbjct: 66 LGRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDIL 124 Query: 357 QTHEIITAGNSLSPWCIIGDFNTFLTHDE--SMGGSTNWTQSMLDFQNCLNSLGLTDLHS 530 T+ S++PW ++GDFN E S+ S + M D Q CL L+DL S Sbjct: 125 VLSR--TSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPS 182 Query: 531 VGKQFTWWNCNPDRPVHRKLDRAIVNGDWLSTFSSSFAKFHPRGLSDHSLVIITLGATQQ 710 G FTW N D P+ RKLDRA+ NG+W + F S+ A F P G SDH+ II + Sbjct: 183 RGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPP 242 Query: 711 HILKPFQIFQHLIDDPRFMDVVQTAWASN-VQGDHWYVLTCKLKLVKNGLKRLNQSR-RN 884 K F+ F L P ++ + TAW +N + G H + L LK+ K + LN+ R N Sbjct: 243 PSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSN 302 Query: 885 LQSEVAKAREDLLAFQASLPRAPSPSQYAIEESLMTALKKALHAEEIFLKQKSRVQWLKS 1064 +Q A++ L Q L +PS + + E A E F +QKSR++WL Sbjct: 303 IQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVARKQWIFFAAALESFFRQKSRIRWLHE 362 Query: 1065 GDENNSYFFKSCRGRWNSNKIMELQDSNGVIYRDHAGISNTAVNYFKNLLGTRKE-VNPF 1241 GD N +F ++ +N I L+ +G + I + Y+ +LLG E V PF Sbjct: 363 GDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPF 422 Query: 1242 ----LHDLALPRLSDVQRAGLDAPVSSAEILASFKGMANNKSPGPDGLTVEFFLAAWKII 1409 + L R + L S EI M NK+PGPDG VEFF+ AW I+ Sbjct: 423 SVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIV 482 Query: 1410 GEDVTRAISSFFQSLQMPRMVNSTAISLIPKQSGPTELSQYRPISCCNVLYKSIAKILAN 1589 V AI FF S +PR N+TAI+LIPK +G L+Q+RP++CC +YK I +I++ Sbjct: 483 KSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISR 542 Query: 1590 RLKPVMCSLISDCQSAFVSKRIIGDNIMLAQSLCRSYHLNSGAPKCAIKLDISKAFDSLD 1769 RLK + + Q F+ R++ +N++LA L ++ + + +++DISKA+D+++ Sbjct: 543 RLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVN 602 Query: 1770 WSFLFNVMEAMHFPEKFMNWIKCCISSCMYSI 1865 W FL N+++A+ P F++WI CISS YSI Sbjct: 603 WEFLINILKALDLPLVFIHWIWVCISSASYSI 634 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 354 bits (908), Expect = 5e-95 Identities = 225/645 (34%), Positives = 338/645 (52%), Gaps = 22/645 (3%) Frame = +3 Query: 3 YNFRGIN--NKMSFAKDFIHHNKLGLVALLETHVKQEMAQMVSHFVAPTF-DW--VYNYS 167 +N RG+N +K S K +I N L+ET VK+ VS V F DW + NY Sbjct: 6 WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESK---VSQLVGKLFKDWSILTNYE 62 Query: 168 YHPNGRLWLGWNAALWNISTISTSAQHISCNVRCLQSNAAFILTIVYGLHTCLDRRDLWN 347 ++ GR+W+ W + +S I S Q ++C+V+ F + VY + +R+ LW+ Sbjct: 63 HNRRGRIWVLWRKNV-RLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVLWS 121 Query: 348 SLSQTHEIITAGNSLSPWCIIGDFNTFLTHDESMGGSTN--WTQSMLDFQNCLNSLGLTD 521 L ++ + PW ++GDFN L E + T M DFQ +N LTD Sbjct: 122 ELKDHYDSPIIRHK--PWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTD 179 Query: 522 LHSVGKQFTWWNCNPDRPVHRKLDRAIVNGDWLSTFSSSFAKFHPRGLSDHSLVIITLGA 701 + + G FTW N + +KLDR ++N W TFS S++ F G SDH I+L + Sbjct: 180 MAAQGPLFTWCNKREHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLNS 239 Query: 702 ---TQQHILKPFQIFQHLIDDPRFMDVVQTAWASN----VQGDHWYVLTCKLKLVKNGLK 860 + LKPF+ L D F +V T W + + + LK +K ++ Sbjct: 240 EAGNKVQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIR 299 Query: 861 RLNQSRR-NLQSEVAKAREDLLAFQASLPRAPSPSQYAIEESLMTALKKALHAEEIFLKQ 1037 + + R NL + +A + L A Q PS E + + + EE +LKQ Sbjct: 300 SMARDRLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEENAAYSRWDRVAILEEKYLKQ 359 Query: 1038 KSRVQWLKSGDENNSYFFKSCRGRWNSNKIMELQDSNGVIYRDHAGISNTAVNYFKNLLG 1217 KS++ W + GD+N F ++ R N I E+ ++G++ I A +F+ L Sbjct: 360 KSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFL- 418 Query: 1218 TRKEVNPF-------LHDLALPRLSDVQRAGLDAPVSSAEILASFKGMANNKSPGPDGLT 1376 + N F L L R SD + L PV++ EI M ++KSPGPDG T Sbjct: 419 -QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYT 477 Query: 1377 VEFFLAAWKIIGEDVTRAISSFFQSLQMPRMVNSTAISLIPKQSGPTELSQYRPISCCNV 1556 EFF A W+IIG++ T A+ SFF +P+ +NST ++LIPK++ E+ YRPISCCNV Sbjct: 478 SEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNV 537 Query: 1557 LYKSIAKILANRLKPVMCSLISDCQSAFVSKRIIGDNIMLAQSLCRSYHLNSGAPKCAIK 1736 LYK I+KI+ANRLK V+ I+ QSAFV R++ +N++LA L + YH ++ + +CAIK Sbjct: 538 LYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIK 597 Query: 1737 LDISKAFDSLDWSFLFNVMEAMHFPEKFMNWIKCCISSCMYSIKV 1871 +DISKAFDS+ W FL NV + FP +F++WI CI++ +S++V Sbjct: 598 IDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQV 642 >gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1449 Score = 353 bits (907), Expect = 7e-95 Identities = 220/630 (34%), Positives = 326/630 (51%), Gaps = 20/630 (3%) Frame = +3 Query: 42 KDFIHHNKLGLVALLETHVKQEMAQMVSHFVAPTFDWVYNYSYHPNGRLWLGWNAALWNI 221 K ++ L+ET VK+E +Q + + + + NY ++ GRLW+ W + Sbjct: 436 KKWVDEQNFQFGCLIETRVKEENSQWLGSKLFKDWSMLTNYEFNRRGRLWVVWRENV-RF 494 Query: 222 STISTSAQHISCNVRCLQSNAAFILTIVYGLHTCLDRRDLWNSLSQTHEIITAGNSLSPW 401 + S Q I+C+V+ F + VY + +R+ LWN L + + PW Sbjct: 495 TPFYKSDQLITCSVKLESQEEEFFYSFVYASNFAEERKILWNDLRDHMDSPIIRDK--PW 552 Query: 402 CIIGDFNTFLTHDES--MGGSTNWTQSMLDFQNCLNSLGLTDLHSVGKQFTWWNCNPDRP 575 I GDFN L DE M T M DFQ+ +N +DL S G FTW N + P Sbjct: 553 IIFGDFNEILDMDEHSRMEDHPAVTSGMRDFQSLVNYCSFSDLASHGPLFTWCNKRDNDP 612 Query: 576 VHRKLDRAIVNGDWLSTFSSSFAKFHPRGLSDHSLVIITLG---ATQQHILKPFQIFQHL 746 + +KLDR +VN W + S+ F G SDH I L Q KPF+ + Sbjct: 613 IWKKLDRVMVNEAWKMVYPQSYNVFEAGGCSDHLRCRINLNMNSGAQVRGNKPFKFVNAV 672 Query: 747 IDDPRFMDVVQTAWAS----NVQGDHWYVLTCKLKLVKNGLKRLNQSRRNLQSEVAKARE 914 D F +V+ W ++ + T KLK +K L+ L ++ + + V + RE Sbjct: 673 ADMEEFKPLVENFWRETEPIHMSTSSLFRFTKKLKALKPKLRGL--AKEKMGNLVKRTRE 730 Query: 915 DLLAF-QASLPRAPSPSQYA--IEESLMTALKKALHAEEIFLKQKSRVQWLKSGDENNSY 1085 L+ QA + +PSQ A IE + EE +LKQ S++ WLK GD+NN Sbjct: 731 AYLSLCQAQQSNSQNPSQRAMEIESEAYVRWDRIASIEEKYLKQVSKLHWLKVGDKNNKT 790 Query: 1086 FFKSCRGRWNSNKIMELQDSNGVIYRDHAGISNTAVNYFKNLL--------GTRKEVNPF 1241 F ++ R N I E+Q +G I N +F+ L G E Sbjct: 791 FHRAATARAAQNSIREIQKEDGSTATTKDDIKNETERFFQEFLQLIPNDYEGITVEK--- 847 Query: 1242 LHDLALPRLSDVQRAGLDAPVSSAEILASFKGMANNKSPGPDGLTVEFFLAAWKIIGEDV 1421 L L S ++ L A VS+ EI + M N+KSPGPDG T EF+ AW IIG + Sbjct: 848 LTSLLPYHCSPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEF 907 Query: 1422 TRAISSFFQSLQMPRMVNSTAISLIPKQSGPTELSQYRPISCCNVLYKSIAKILANRLKP 1601 A+ SFF+ +P+ VN+T ++LIPK+ E+ YRPISCCNV+YK I+KI+ANRLK Sbjct: 908 VLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKH 967 Query: 1602 VMCSLISDCQSAFVSKRIIGDNIMLAQSLCRSYHLNSGAPKCAIKLDISKAFDSLDWSFL 1781 V+ + I+ QSAFV R++ +N++LA L + YH ++ + +CAIK+DISKAFDS+ WSFL Sbjct: 968 VLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFL 1027 Query: 1782 FNVMEAMHFPEKFMNWIKCCISSCMYSIKV 1871 NV+ A+ FP +F++W+ C+++ +S++V Sbjct: 1028 KNVLSALDFPPEFVHWVMLCVTTASFSVQV 1057