BLASTX nr result

ID: Bupleurum21_contig00005860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005860
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27986.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vit...   431   e-118
ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmi...   420   e-115
ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis ...   420   e-115

>emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  431 bits (1107), Expect = e-118
 Identities = 209/248 (84%), Positives = 228/248 (91%)
 Frame = -2

Query: 745  EEKAEWIIYVTDVGQREHFDMLFTAAKRAGWLPAEDNMYPRTNHVGFGLVLGEDGKRFRT 566
            EEKAEWIIYVTDVGQ++HF+M+F+AAK AGWLPA DNMYP+ +HVGFGLVLGEDGKRFRT
Sbjct: 437  EEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRT 496

Query: 565  RSTEVVRLVDLLDEAKIRCRDALIERGKDAEWTKEELEQTAEAVGYGAVKYADLKNNRLT 386
            R+TEVVRLVDLLDEAK R +  LIERGK AEWT++ELE TAEAVGYGAVKYADLKNNRLT
Sbjct: 497  RNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKYADLKNNRLT 556

Query: 385  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEDLKKVGRIELTQDAERVLGLH 206
            NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI++LKK G + L  D ER LGLH
Sbjct: 557  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIDELKKTGVLTLDHDDERGLGLH 616

Query: 205  LLQFAETVEDACTNLLPNVLCEYLYGLSEDFSGFYSTCQVVGSAEETSRLLLCEATAIVM 26
            LLQF+E VE+ACTNLLPNVLCEYLY LSE+F+ FYS CQVVGSAEETSRLLLCEATA+VM
Sbjct: 617  LLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSNCQVVGSAEETSRLLLCEATAVVM 676

Query: 25   RKCFHLLG 2
            RKCFHLLG
Sbjct: 677  RKCFHLLG 684


>ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vitis vinifera]
          Length = 649

 Score =  431 bits (1107), Expect = e-118
 Identities = 209/248 (84%), Positives = 228/248 (91%)
 Frame = -2

Query: 745  EEKAEWIIYVTDVGQREHFDMLFTAAKRAGWLPAEDNMYPRTNHVGFGLVLGEDGKRFRT 566
            EEKAEWIIYVTDVGQ++HF+M+F+AAK AGWLPA DNMYP+ +HVGFGLVLGEDGKRFRT
Sbjct: 395  EEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRT 454

Query: 565  RSTEVVRLVDLLDEAKIRCRDALIERGKDAEWTKEELEQTAEAVGYGAVKYADLKNNRLT 386
            R+TEVVRLVDLLDEAK R +  LIERGK AEWT++ELE TAEAVGYGAVKYADLKNNRLT
Sbjct: 455  RNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKYADLKNNRLT 514

Query: 385  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEDLKKVGRIELTQDAERVLGLH 206
            NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI++LKK G + L  D ER LGLH
Sbjct: 515  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIDELKKTGVLTLDHDDERGLGLH 574

Query: 205  LLQFAETVEDACTNLLPNVLCEYLYGLSEDFSGFYSTCQVVGSAEETSRLLLCEATAIVM 26
            LLQF+E VE+ACTNLLPNVLCEYLY LSE+F+ FYS CQVVGSAEETSRLLLCEATA+VM
Sbjct: 575  LLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSNCQVVGSAEETSRLLLCEATAVVM 634

Query: 25   RKCFHLLG 2
            RKCFHLLG
Sbjct: 635  RKCFHLLG 642


>ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  426 bits (1095), Expect = e-117
 Identities = 209/248 (84%), Positives = 224/248 (90%)
 Frame = -2

Query: 745  EEKAEWIIYVTDVGQREHFDMLFTAAKRAGWLPAEDNMYPRTNHVGFGLVLGEDGKRFRT 566
            EEKAEWIIYVTDVGQ++HFDM F AAKRAGWLPA+D  YP+ +HVGFGLVLGEDGKRFRT
Sbjct: 336  EEKAEWIIYVTDVGQQQHFDMFFKAAKRAGWLPADDRQYPKASHVGFGLVLGEDGKRFRT 395

Query: 565  RSTEVVRLVDLLDEAKIRCRDALIERGKDAEWTKEELEQTAEAVGYGAVKYADLKNNRLT 386
            RSTEVVRL DLLDEAK R + ALIERGK AEWT+EELEQTAEAVGYGAVKYADLKNNRLT
Sbjct: 396  RSTEVVRLADLLDEAKTRSKAALIERGKAAEWTEEELEQTAEAVGYGAVKYADLKNNRLT 455

Query: 385  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEDLKKVGRIELTQDAERVLGLH 206
            NYTF+FDQMLNDKGNTAVYLLYAHARICSIIRKSGKD  +LKK G+I L    ER LGLH
Sbjct: 456  NYTFDFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDTGELKKTGKIVLDHADERALGLH 515

Query: 205  LLQFAETVEDACTNLLPNVLCEYLYGLSEDFSGFYSTCQVVGSAEETSRLLLCEATAIVM 26
            LLQFAE VE+ACTNLLPNVLCEYLY LSE+++ FYS CQVVGSAEETSRLLLCEATA+VM
Sbjct: 516  LLQFAEVVEEACTNLLPNVLCEYLYNLSENYTRFYSNCQVVGSAEETSRLLLCEATAVVM 575

Query: 25   RKCFHLLG 2
            RKCF LLG
Sbjct: 576  RKCFFLLG 583


>ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus]
            gi|449489808|ref|XP_004158422.1| PREDICTED:
            arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus]
          Length = 590

 Score =  420 bits (1080), Expect = e-115
 Identities = 210/249 (84%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
 Frame = -2

Query: 745  EEKAEWIIYVTDVGQREHFDMLFTAAKRAGWLPAEDNMYPRTNHVGFGLVLGEDGKRFRT 566
            EEKAEWIIYVTDVGQ++HFDM+F A KRAGWLP EDN YP+T HVGFGLVLGEDGKRFRT
Sbjct: 335  EEKAEWIIYVTDVGQQQHFDMVFRAGKRAGWLPLEDNKYPKTTHVGFGLVLGEDGKRFRT 394

Query: 565  RSTEVVRLVDLLDEAKIRCRDALIERGKDAEWTKEELEQTAEAVGYGAVKYADLKNNRLT 386
            R+TEVVRLVDLLDEAK R + ALIER K AEWT+ ELEQ AEAVGYGAVKYADLKNNRLT
Sbjct: 395  RNTEVVRLVDLLDEAKNRSKAALIEREKAAEWTEAELEQIAEAVGYGAVKYADLKNNRLT 454

Query: 385  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEDLKKVGRIELTQDAERVLGLH 206
            NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGK+IE+LKK G I L  + ERVLGLH
Sbjct: 455  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKNIEELKKTGTIVLEHEDERVLGLH 514

Query: 205  LLQFAETVEDACTNLLPNVLCEYLYGLSEDFS-GFYSTCQVVGSAEETSRLLLCEATAIV 29
            LLQFAE VE+ACTNLLPNVLCEYLY LSE F+  FYS CQVVGSA+ETSRLLLCEAT  V
Sbjct: 515  LLQFAEVVEEACTNLLPNVLCEYLYNLSEIFTKKFYSNCQVVGSAQETSRLLLCEATGTV 574

Query: 28   MRKCFHLLG 2
            MRKCFHLLG
Sbjct: 575  MRKCFHLLG 583


>ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
            gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase
            [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1|
            arginyl-tRNA synthetase [Arabidopsis thaliana]
            gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase
            [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1|
            Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  420 bits (1080), Expect = e-115
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -2

Query: 745  EEKAEWIIYVTDVGQREHFDMLFTAAKRAGWLPAEDNMYPRTNHVGFGLVLGEDGKRFRT 566
            EEKAEWIIYVTDVGQ++HF+M F AA++AGWLP  D  YPR NHVGFGLVLGEDGKRFRT
Sbjct: 388  EEKAEWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGKRFRT 447

Query: 565  RSTEVVRLVDLLDEAKIRCRDALIERGKDAEWTKEELEQTAEAVGYGAVKYADLKNNRLT 386
            R+T+VVRLVDLLDEAK R + ALIERGKD EWT EEL+QTAEAVGYGAVKYADLKNNRLT
Sbjct: 448  RATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLT 507

Query: 385  NYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEDLKKVGRIELTQDAERVLGLH 206
            NYTF+FDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI++LKK G++ L    ER LGLH
Sbjct: 508  NYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIDELKKTGKLALDHADERALGLH 567

Query: 205  LLQFAETVEDACTNLLPNVLCEYLYGLSEDFSGFYSTCQVVGSAEETSRLLLCEATAIVM 26
            LL+FAETVE+ACTNLLP+VLCEYLY LSE F+ FYS CQV GS EETSRLLLCEATAIVM
Sbjct: 568  LLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSNCQVNGSPEETSRLLLCEATAIVM 627

Query: 25   RKCFHLLG 2
            RKCFHLLG
Sbjct: 628  RKCFHLLG 635


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