BLASTX nr result

ID: Bupleurum21_contig00005856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005856
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301626.1| glutamate-gated kainate-type ion channel rec...   474   e-131
dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]         469   e-130
emb|CBI28942.3| unnamed protein product [Vitis vinifera]              469   e-130
ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...   469   e-130
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...   460   e-127

>ref|XP_002301626.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222843352|gb|EEE80899.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 861

 Score =  474 bits (1221), Expect = e-131
 Identities = 232/334 (69%), Positives = 276/334 (82%)
 Frame = +3

Query: 3    FEAAVGDIAIVTNRTKIVDFTQPYISTGLVIVAPIRNSDSSAWVFLKPFTWEMWSVTAAS 182
            F+AAVGDIAIVTNRTKIVDF+QPY STGLVIVAPIRNS SSAWVFLKPFT EMW VTAAS
Sbjct: 486  FDAAVGDIAIVTNRTKIVDFSQPYASTGLVIVAPIRNSKSSAWVFLKPFTAEMWCVTAAS 545

Query: 183  FVIIGVVIWILEHRVNDDFRGPPKRQIITMFLFSMSTLFKTNQEDTVSPLGKXXXXXXXX 362
            FV+I VVIW+LEHRVNDDFRGPP+RQ++TMF+FS STLFKTN+E TVSPLGK        
Sbjct: 546  FVVIAVVIWVLEHRVNDDFRGPPRRQLVTMFMFSFSTLFKTNKETTVSPLGKLVMVVWLF 605

Query: 363  XXXXITSSYTASLTSILTVQQLPSSITGIESLIASNLPIGYQVGSFAYNYMTDSLNIHPS 542
                IT+SYTASLTSILT+QQL S ITGIESLIAS+ PIGYQ GSFAYNY++++L I  S
Sbjct: 606  LLMVITASYTASLTSILTIQQLSSPITGIESLIASHWPIGYQTGSFAYNYLSETLYIARS 665

Query: 543  RLVCLDTPNDYERTLRQGPKNGGVAAIVDELPYVELFLSNQTDFRIVGQSFTKSGWGFVF 722
            RLV L +P +YE  LR+GP +GGVAAIVDELPYVELFLS+Q DF I+GQ FT+ GWGF F
Sbjct: 666  RLVPLGSPEEYESALRRGPSDGGVAAIVDELPYVELFLSSQKDFGIIGQPFTRGGWGFAF 725

Query: 723  QKDSPLAIDFSTAILKLAENGGLQKLHDKWFCKAGCAVSRRQETEPNQLNFSSFMGLYIV 902
            Q++SPLA+D STAILKL+ENG LQK+++KWFCK GC   ++    PNQL  +SF GLYI+
Sbjct: 726  QRESPLALDISTAILKLSENGELQKIYEKWFCKMGCHGEKKHGDGPNQLKLTSFWGLYIL 785

Query: 903  FGAFTIIVCIIFLLRTIRQYIRYKQKQMDPSSPT 1004
             GAF +   ++FLLR +RQ++RYK++Q+  SSP+
Sbjct: 786  CGAFALTALVVFLLRMVRQFVRYKRRQLRCSSPS 819


>dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]
          Length = 866

 Score =  469 bits (1206), Expect = e-130
 Identities = 234/334 (70%), Positives = 274/334 (82%)
 Frame = +3

Query: 3    FEAAVGDIAIVTNRTKIVDFTQPYISTGLVIVAPIRNSDSSAWVFLKPFTWEMWSVTAAS 182
            F+AA+GDIAIVTNRT++VDFTQPY+STGLVIVAPI  S+SSAWVFLKPFT EMW VTA S
Sbjct: 494  FDAAIGDIAIVTNRTRMVDFTQPYVSTGLVIVAPIDTSESSAWVFLKPFTLEMWGVTALS 553

Query: 183  FVIIGVVIWILEHRVNDDFRGPPKRQIITMFLFSMSTLFKTNQEDTVSPLGKXXXXXXXX 362
            F+II VVIWILEHRVN+DFRGPPKRQI TMFLFS STLFKTNQE+TVS LG+        
Sbjct: 554  FLIIAVVIWILEHRVNEDFRGPPKRQITTMFLFSFSTLFKTNQENTVSTLGRMVMVVWLF 613

Query: 363  XXXXITSSYTASLTSILTVQQLPSSITGIESLIASNLPIGYQVGSFAYNYMTDSLNIHPS 542
                ITSSYTASLTSILTVQQL S ITGI+SLIASN  IGYQVGSFAY+Y+ D LNI PS
Sbjct: 614  LLLVITSSYTASLTSILTVQQLSSPITGIDSLIASNSLIGYQVGSFAYSYLKDILNIAPS 673

Query: 543  RLVCLDTPNDYERTLRQGPKNGGVAAIVDELPYVELFLSNQTDFRIVGQSFTKSGWGFVF 722
            RL  L +P ++E  LRQG  NGGV AIVDELPY+ELFL N+TDF I+G+ FTKSGWGF F
Sbjct: 674  RLKSLRSPEEFEAALRQGLGNGGVMAIVDELPYMELFLQNRTDFGIIGRPFTKSGWGFAF 733

Query: 723  QKDSPLAIDFSTAILKLAENGGLQKLHDKWFCKAGCAVSRRQETEPNQLNFSSFMGLYIV 902
            +KDSPLA D STAILKLAE+G LQ++H+KWFC+ GC   RR+++ P+QL+ SSF  LY++
Sbjct: 734  KKDSPLANDMSTAILKLAESGKLQEIHEKWFCQLGCPTDRRKDSVPDQLHLSSFWALYLL 793

Query: 903  FGAFTIIVCIIFLLRTIRQYIRYKQKQMDPSSPT 1004
             GA T++  +IFLL++IRQYIRYK+   D SSP+
Sbjct: 794  SGAVTVLALLIFLLKSIRQYIRYKRNHTDLSSPS 827


>emb|CBI28942.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  469 bits (1206), Expect = e-130
 Identities = 231/327 (70%), Positives = 268/327 (81%)
 Frame = +3

Query: 3    FEAAVGDIAIVTNRTKIVDFTQPYISTGLVIVAPIRNSDSSAWVFLKPFTWEMWSVTAAS 182
            F+  VGD+AIVTNRT+IVDFTQPY +TGLVIVAP+ N+  SAWVFLKPFT EMW VTAA+
Sbjct: 463  FDGVVGDVAIVTNRTRIVDFTQPYAATGLVIVAPVHNTKLSAWVFLKPFTVEMWCVTAAA 522

Query: 183  FVIIGVVIWILEHRVNDDFRGPPKRQIITMFLFSMSTLFKTNQEDTVSPLGKXXXXXXXX 362
            FV+I VVIWILEHRVNDDFRGPPKRQ+ITMFLFS STLFKTNQEDT S LG+        
Sbjct: 523  FVMIAVVIWILEHRVNDDFRGPPKRQLITMFLFSFSTLFKTNQEDTRSTLGRIVMVVWLF 582

Query: 363  XXXXITSSYTASLTSILTVQQLPSSITGIESLIASNLPIGYQVGSFAYNYMTDSLNIHPS 542
                ITSSYTASLTSILTVQQL S ITGI+SLIAS+LPIGYQVGSFA++Y+ DSL +H S
Sbjct: 583  LLMVITSSYTASLTSILTVQQLSSPITGIDSLIASDLPIGYQVGSFAFSYLRDSLYVHQS 642

Query: 543  RLVCLDTPNDYERTLRQGPKNGGVAAIVDELPYVELFLSNQTDFRIVGQSFTKSGWGFVF 722
            RLV L +P  YE  LR+GPK GGVAAIVDELPYVELFL  Q DF + GQ+FTKSGWGF F
Sbjct: 643  RLVSLGSPEAYEMALRKGPKGGGVAAIVDELPYVELFLEKQKDFGVFGQTFTKSGWGFAF 702

Query: 723  QKDSPLAIDFSTAILKLAENGGLQKLHDKWFCKAGCAVSRRQETEPNQLNFSSFMGLYIV 902
            QKDSPLA D STAIL+L+E G LQK+H+ WFCK GC   RR+++EPNQL+  SF GLY++
Sbjct: 703  QKDSPLAADLSTAILRLSETGTLQKIHENWFCKMGCPGWRRRKSEPNQLHMISFWGLYLL 762

Query: 903  FGAFTIIVCIIFLLRTIRQYIRYKQKQ 983
             G+ T+I  ++FLLRTIRQ+ RYK+K+
Sbjct: 763  CGSITLIALLVFLLRTIRQFARYKRKK 789


>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score =  469 bits (1206), Expect = e-130
 Identities = 231/327 (70%), Positives = 268/327 (81%)
 Frame = +3

Query: 3    FEAAVGDIAIVTNRTKIVDFTQPYISTGLVIVAPIRNSDSSAWVFLKPFTWEMWSVTAAS 182
            F+  VGD+AIVTNRT+IVDFTQPY +TGLVIVAP+ N+  SAWVFLKPFT EMW VTAA+
Sbjct: 534  FDGVVGDVAIVTNRTRIVDFTQPYAATGLVIVAPVHNTKLSAWVFLKPFTVEMWCVTAAA 593

Query: 183  FVIIGVVIWILEHRVNDDFRGPPKRQIITMFLFSMSTLFKTNQEDTVSPLGKXXXXXXXX 362
            FV+I VVIWILEHRVNDDFRGPPKRQ+ITMFLFS STLFKTNQEDT S LG+        
Sbjct: 594  FVMIAVVIWILEHRVNDDFRGPPKRQLITMFLFSFSTLFKTNQEDTRSTLGRIVMVVWLF 653

Query: 363  XXXXITSSYTASLTSILTVQQLPSSITGIESLIASNLPIGYQVGSFAYNYMTDSLNIHPS 542
                ITSSYTASLTSILTVQQL S ITGI+SLIAS+LPIGYQVGSFA++Y+ DSL +H S
Sbjct: 654  LLMVITSSYTASLTSILTVQQLSSPITGIDSLIASDLPIGYQVGSFAFSYLRDSLYVHQS 713

Query: 543  RLVCLDTPNDYERTLRQGPKNGGVAAIVDELPYVELFLSNQTDFRIVGQSFTKSGWGFVF 722
            RLV L +P  YE  LR+GPK GGVAAIVDELPYVELFL  Q DF + GQ+FTKSGWGF F
Sbjct: 714  RLVSLGSPEAYEMALRKGPKGGGVAAIVDELPYVELFLEKQKDFGVFGQTFTKSGWGFAF 773

Query: 723  QKDSPLAIDFSTAILKLAENGGLQKLHDKWFCKAGCAVSRRQETEPNQLNFSSFMGLYIV 902
            QKDSPLA D STAIL+L+E G LQK+H+ WFCK GC   RR+++EPNQL+  SF GLY++
Sbjct: 774  QKDSPLAADLSTAILRLSETGTLQKIHENWFCKMGCPGWRRRKSEPNQLHMISFWGLYLL 833

Query: 903  FGAFTIIVCIIFLLRTIRQYIRYKQKQ 983
             G+ T+I  ++FLLRTIRQ+ RYK+K+
Sbjct: 834  CGSITLIALLVFLLRTIRQFARYKRKK 860


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 921

 Score =  460 bits (1184), Expect = e-127
 Identities = 227/334 (67%), Positives = 270/334 (80%), Gaps = 1/334 (0%)
 Frame = +3

Query: 6    EAAVGDIAIVTNRTKIVDFTQPYISTGLVIVAPIRNSDSSAWVFLKPFTWEMWSVTAASF 185
            +AAVGDIAIVTNRTKIVDF+QPY ++GLVI+APIRNS SSAWVFLKPFT EMW VTAASF
Sbjct: 543  DAAVGDIAIVTNRTKIVDFSQPYAASGLVILAPIRNSKSSAWVFLKPFTVEMWCVTAASF 602

Query: 186  VIIGVVIWILEHRVNDDFRGPPKRQIITMFLFSMSTLFKTNQEDTVSPLGKXXXXXXXXX 365
            ++I VVIWILEHRVND+FRGPP+RQI+TMF+FS STLFKTNQE T+SPL +         
Sbjct: 603  LMIAVVIWILEHRVNDEFRGPPRRQIVTMFMFSFSTLFKTNQETTISPLARMVMVVWLFV 662

Query: 366  XXXITSSYTASLTSILTVQQLPSSITGIESLIASNLPIGYQVGSFAYNYMTDSLNIHPSR 545
               IT+SYTASLTSILTV+QL S ITGI+SLIAS  PIGYQVGSFAY Y+ +SL I  SR
Sbjct: 663  LMVITASYTASLTSILTVEQLSSPITGIDSLIASKWPIGYQVGSFAYEYLYESLYISRSR 722

Query: 546  LVCLDTPNDYERTLRQGPKN-GGVAAIVDELPYVELFLSNQTDFRIVGQSFTKSGWGFVF 722
            LV L TP +YER LR GP+N GGVAA+VDELPYVELFL+   DF I+GQ FT+ GWGF F
Sbjct: 723  LVPLGTPEEYERALRLGPQNVGGVAAVVDELPYVELFLAKHGDFGIIGQPFTRGGWGFAF 782

Query: 723  QKDSPLAIDFSTAILKLAENGGLQKLHDKWFCKAGCAVSRRQETEPNQLNFSSFMGLYIV 902
            Q+DSPLA+D STAILKL+E G LQK+H+KWFCK GCA  +RQ++EPNQL   SF GLY++
Sbjct: 783  QRDSPLALDMSTAILKLSETGVLQKIHEKWFCKKGCAGEKRQKSEPNQLRLISFWGLYLL 842

Query: 903  FGAFTIIVCIIFLLRTIRQYIRYKQKQMDPSSPT 1004
             G  T+   ++FLLR +RQ++ YK++QM    P+
Sbjct: 843  CGGVTLAALLLFLLRAVRQFVHYKRRQMQQVPPS 876


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