BLASTX nr result
ID: Bupleurum21_contig00005853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00005853
(673 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300224.1| predicted protein [Populus trichocarpa] gi|2... 157 2e-58
ref|XP_002282377.1| PREDICTED: uncharacterized protein LOC100258... 155 6e-58
emb|CAN68213.1| hypothetical protein VITISV_022802 [Vitis vinifera] 155 6e-58
ref|XP_003607931.1| RING finger protein [Medicago truncatula] gi... 154 3e-56
ref|XP_003607932.1| RING finger protein [Medicago truncatula] gi... 154 3e-56
>ref|XP_002300224.1| predicted protein [Populus trichocarpa] gi|222847482|gb|EEE85029.1|
predicted protein [Populus trichocarpa]
Length = 219
Score = 157 bits (398), Expect(2) = 2e-58
Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 7/142 (4%)
Frame = +3
Query: 51 NSQGHSQP-YTRPAYMMEIAGDNA----DEWRALAADINGRQRLVSEIRQVLNVMRWGEN 215
+SQGH+ P + R A++ E D+ RALAADI GR RL+SEIRQVLN MR GEN
Sbjct: 32 SSQGHNPPPFPRSAFLTEEQSDDVLGMPRSLRALAADIEGRHRLISEIRQVLNAMRRGEN 91
Query: 216 LRAEDYMLLDPFI-NGVAELQDRHRDMRLGVDNMSYEELLALEERIGDVNTGLSEEIMSQ 392
LR EDYML DP I +G+AE+ DRHRDMRL VDNMSYEELLALEERIGDV+TGLSEE + +
Sbjct: 92 LRVEDYMLFDPMIYHGMAEMHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEETILK 151
Query: 393 SLK-ERHFLACVRGLSSLEPCC 455
LK E+H + LEPCC
Sbjct: 152 LLKQEKHVPISTESPADLEPCC 173
Score = 94.7 bits (234), Expect(2) = 2e-58
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +1
Query: 532 EPCCICQEEYVAGEIIGTLDCGHDFHSNCVKQWLRQKNICPICKMT 669
EPCCICQEEYV G+ +G +DCGHDFH+NC+KQWL QKN+CPICKMT
Sbjct: 170 EPCCICQEEYVDGDDMGIIDCGHDFHTNCIKQWLMQKNLCPICKMT 215
>ref|XP_002282377.1| PREDICTED: uncharacterized protein LOC100258840 [Vitis vinifera]
Length = 734
Score = 155 bits (392), Expect(2) = 6e-58
Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 5/139 (3%)
Frame = +3
Query: 54 SQGHSQPYTRPAYMMEIAGDNA----DEWRALAADINGRQRLVSEIRQVLNVMRWGENLR 221
SQ H Q Y R A++ME G++ RALAADI GR RL+SEIRQVL MR GE+LR
Sbjct: 552 SQVHQQTYPRSAFLMERQGNDVLGMPHSLRALAADIEGRHRLISEIRQVLTAMRRGESLR 611
Query: 222 AEDYMLLDPFI-NGVAELQDRHRDMRLGVDNMSYEELLALEERIGDVNTGLSEEIMSQSL 398
AEDYML DPFI +G++ELQDRHRDMRL VDNMSYEELL LEERIGDVNTGLS+E + + +
Sbjct: 612 AEDYMLFDPFIYHGMSELQDRHRDMRLDVDNMSYEELLDLEERIGDVNTGLSDEKILKCM 671
Query: 399 KERHFLACVRGLSSLEPCC 455
K + + + +EPCC
Sbjct: 672 KRQKYSS--NPTPEVEPCC 688
Score = 95.1 bits (235), Expect(2) = 6e-58
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1
Query: 532 EPCCICQEEYVAGEIIGTLDCGHDFHSNCVKQWLRQKNICPICKMTG 672
EPCCICQEEY G+ +G LDCGHDFH+NC+KQWL QKN+CPICK TG
Sbjct: 685 EPCCICQEEYAVGDDLGILDCGHDFHTNCIKQWLMQKNLCPICKTTG 731
>emb|CAN68213.1| hypothetical protein VITISV_022802 [Vitis vinifera]
Length = 553
Score = 155 bits (392), Expect(2) = 6e-58
Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 5/139 (3%)
Frame = +3
Query: 54 SQGHSQPYTRPAYMMEIAGDNA----DEWRALAADINGRQRLVSEIRQVLNVMRWGENLR 221
SQ H Q Y R A++ME G++ RALAADI GR RL+SEIRQVL MR GE+LR
Sbjct: 371 SQVHQQTYPRSAFLMERQGNDVLGMPHSLRALAADIEGRHRLISEIRQVLTAMRRGESLR 430
Query: 222 AEDYMLLDPFI-NGVAELQDRHRDMRLGVDNMSYEELLALEERIGDVNTGLSEEIMSQSL 398
AEDYML DPFI +G++ELQDRHRDMRL VDNMSYEELL LEERIGDVNTGLS+E + + +
Sbjct: 431 AEDYMLFDPFIYHGMSELQDRHRDMRLDVDNMSYEELLDLEERIGDVNTGLSDEKILKCM 490
Query: 399 KERHFLACVRGLSSLEPCC 455
K + + + +EPCC
Sbjct: 491 KRQKYSS--NPTPEVEPCC 507
Score = 95.1 bits (235), Expect(2) = 6e-58
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1
Query: 532 EPCCICQEEYVAGEIIGTLDCGHDFHSNCVKQWLRQKNICPICKMTG 672
EPCCICQEEY G+ +G LDCGHDFH+NC+KQWL QKN+CPICK TG
Sbjct: 504 EPCCICQEEYAVGDDLGILDCGHDFHTNCIKQWLMQKNLCPICKTTG 550
>ref|XP_003607931.1| RING finger protein [Medicago truncatula]
gi|355508986|gb|AES90128.1| RING finger protein
[Medicago truncatula]
Length = 669
Score = 154 bits (388), Expect(2) = 3e-56
Identities = 85/142 (59%), Positives = 107/142 (75%), Gaps = 8/142 (5%)
Frame = +3
Query: 54 SQGHS--QPYTRPAYMMEIAGDNA----DEWRALAADINGRQRLVSEIRQVLNVMRWGEN 215
SQG S QP+ RP++M E G + R L D GR+RL+SEIRQVL MR GEN
Sbjct: 482 SQGSSSNQPHPRPSFMTERRGGDVLSAPHSLRTLPFDNEGRRRLISEIRQVLLAMRRGEN 541
Query: 216 LRAEDYMLLDPFI-NGVAELQDRHRDMRLGVDNMSYEELLALEERIGDVNTGLSEEIMSQ 392
LRAEDYML DPF+ +G+AE+ DRHR+MRL VDNMSYEELLALEERIGDV+TGLSE+I+++
Sbjct: 542 LRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALEERIGDVSTGLSEDIINK 601
Query: 393 SLKERHFLACVRGLSS-LEPCC 455
+K+R +++ + SS LEPCC
Sbjct: 602 LMKQRFYMSLMTESSSDLEPCC 623
Score = 90.9 bits (224), Expect(2) = 3e-56
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 532 EPCCICQEEYVAGEIIGTLDCGHDFHSNCVKQWLRQKNICPICKMT 669
EPCCICQEEYV G+ +G LDCGH+FHSNC+ QWL QKN+CPICK T
Sbjct: 620 EPCCICQEEYVDGQNLGLLDCGHEFHSNCITQWLMQKNLCPICKTT 665
>ref|XP_003607932.1| RING finger protein [Medicago truncatula]
gi|355508987|gb|AES90129.1| RING finger protein
[Medicago truncatula]
Length = 557
Score = 154 bits (388), Expect(2) = 3e-56
Identities = 85/142 (59%), Positives = 107/142 (75%), Gaps = 8/142 (5%)
Frame = +3
Query: 54 SQGHS--QPYTRPAYMMEIAGDNA----DEWRALAADINGRQRLVSEIRQVLNVMRWGEN 215
SQG S QP+ RP++M E G + R L D GR+RL+SEIRQVL MR GEN
Sbjct: 370 SQGSSSNQPHPRPSFMTERRGGDVLSAPHSLRTLPFDNEGRRRLISEIRQVLLAMRRGEN 429
Query: 216 LRAEDYMLLDPFI-NGVAELQDRHRDMRLGVDNMSYEELLALEERIGDVNTGLSEEIMSQ 392
LRAEDYML DPF+ +G+AE+ DRHR+MRL VDNMSYEELLALEERIGDV+TGLSE+I+++
Sbjct: 430 LRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALEERIGDVSTGLSEDIINK 489
Query: 393 SLKERHFLACVRGLSS-LEPCC 455
+K+R +++ + SS LEPCC
Sbjct: 490 LMKQRFYMSLMTESSSDLEPCC 511
Score = 90.9 bits (224), Expect(2) = 3e-56
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 532 EPCCICQEEYVAGEIIGTLDCGHDFHSNCVKQWLRQKNICPICKMT 669
EPCCICQEEYV G+ +G LDCGH+FHSNC+ QWL QKN+CPICK T
Sbjct: 508 EPCCICQEEYVDGQNLGLLDCGHEFHSNCITQWLMQKNLCPICKTT 553