BLASTX nr result

ID: Bupleurum21_contig00005833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005833
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    77   1e-12
ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_004135402.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    58   9e-07
gb|ABK95116.1| unknown [Populus trichocarpa]                           57   2e-06
ref|XP_004164163.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    56   4e-06

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 9/108 (8%)
 Frame = +3

Query: 12  DVNSLCGFSTETNMDIEEFDADVENLFRKGLDEDSFDMETLGFL---EKYSHESCTSIET 182
           DV+SL GF   ++MD+ EF ADVE+L  KGLD +SF ME LG +   EK S E       
Sbjct: 184 DVDSLHGF-LPSDMDLAEFAADVESLLGKGLDNESFGMEGLGLIDCKEKESVEYSLHSGR 242

Query: 183 VKVEDEENREFNMGDI------AQIDITAETFELNFDDYESPGNCEED 308
           VK+E+EE    ++G +      A+ID+T E FELNF DY SP  CEE+
Sbjct: 243 VKLEEEE----DIGGVMACQADAEIDMTREPFELNF-DYGSPATCEEE 285


>ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|222864980|gb|EEF02111.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 15/117 (12%)
 Frame = +3

Query: 9   KDVNSLCGFSTETNMDIEEFDADVENLFRKGLDEDSFDMETLGFLEKYSHESCTSIE--- 179
           KDV SL GF   ++MD+ EF AD+E+L  +GL+ +SF ME LG ++    E+   ++   
Sbjct: 190 KDVESLHGF-LPSDMDLAEFAADMESLLGRGLENESFGMEELGLMD-CKEENELGVKGYP 247

Query: 180 ----TVKVEDEENREFNMGDI------AQIDITAE-TFELNFDDYESPGNC-EEDIK 314
                VKVE+EE+       +       +IDI  +  FEL+F DY+SP  C EED K
Sbjct: 248 LGNGKVKVEEEEDAGMEEKAVRECHADIEIDIAKDPPFELSF-DYDSPATCVEEDEK 303


>ref|XP_004135402.1| PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Cucumis
           sativus]
          Length = 403

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
 Frame = +3

Query: 48  NMDIEEFDADVENLFRKGLDEDSFDMETLGFLEKYSHE------SCTSIETVKVEDEENR 209
           +MD  EF ADVE+L    LD + FDME LG +    H       S TS E +K+E +E  
Sbjct: 154 DMDPAEFAADVESLLGNSLDNECFDMEELGLVASKDHSLTNDDYSLTSHEIIKIEPDEIE 213

Query: 210 EFNMGDIAQIDITAETFELNFDDYES-PGNCEED 308
                   + D   E FELNF D+ S P  C E+
Sbjct: 214 VLTPMLGIEADTMREPFELNFMDFGSNPTTCSEE 247


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
 Frame = +3

Query: 9   KDVNSLCGFSTETNMDIEEFDADVENLFRKGLDEDSFDMETLGFLEKYSHESCTSIE--- 179
           +DV SL GF   ++MD+ EF AD+E+L  +GL+ +SF ME LG ++    E    ++   
Sbjct: 191 RDVESLPGF-LPSDMDLAEFAADMESLLGRGLENESFGMEELGLMD-CKEEKEFEVKGFP 248

Query: 180 ----TVKVEDEENREFNMGDIAQIDITAET-------FELNFDDYESPGNC-EEDIK 314
                VKVEDEEN       + +     ET       FEL+F DY S   C EED K
Sbjct: 249 LWNGKVKVEDEENASVERKAVRKCYAGIETDMAKDPIFELSF-DYNSSATCGEEDEK 304


>ref|XP_004164163.1| PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Cucumis
           sativus]
          Length = 375

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
 Frame = +3

Query: 48  NMDIEEFDADVENLFRKGLDEDSFDMETLGFLEKYSHE------SCTSIETVKVEDEENR 209
           +MD  EF ADVE+L    LD + FDME LG +    H       S  S E +K+E +E  
Sbjct: 154 DMDPAEFAADVESLLGNSLDNECFDMEELGLVASKDHSLTNDDYSLNSHEIIKIEPDEIE 213

Query: 210 EFNMGDIAQIDITAETFELNFDDYES-PGNCEED 308
                   + D   E FELNF D+ S P  C E+
Sbjct: 214 VLTPMLGIEADTMREPFELNFMDFGSNPTTCSEE 247


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