BLASTX nr result

ID: Bupleurum21_contig00005827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005827
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74385.1| hypothetical protein VITISV_023803 [Vitis vinifera]   305   5e-81
ref|XP_002264338.2| PREDICTED: uncharacterized protein LOC100265...   305   6e-81
ref|XP_002522728.1| DNA binding protein, putative [Ricinus commu...   303   2e-80
emb|CBI39709.3| unnamed protein product [Vitis vinifera]              284   9e-75
ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|2...   279   4e-73

>emb|CAN74385.1| hypothetical protein VITISV_023803 [Vitis vinifera]
          Length = 821

 Score =  305 bits (781), Expect = 5e-81
 Identities = 148/215 (68%), Positives = 169/215 (78%), Gaps = 13/215 (6%)
 Frame = -3

Query: 608 VCKGRNSRNLKVHTSGIVWSGEPWACGKQLKHYPAFCRNGTTIAIQSFVFVMAEEENHHL 429
           V +GR +RNL+ H S IVWSG  W CGKQLKHYP+FCRNGTTI IQSFVFVMA+EE+H+L
Sbjct: 143 VQQGRFARNLEGHDSDIVWSGVAWTCGKQLKHYPSFCRNGTTIVIQSFVFVMAKEEDHYL 202

Query: 428 AYLEDMYEDRKGQKKVKVRWFHHNREVKGVVSIRNSHPKEVFITPYAQVISVECVDGPAI 249
           AYLEDMYEDRKGQKKV+VRWFHHN+EVKGV+ +RN HPKEVFITPYAQVIS ECVDGPAI
Sbjct: 203 AYLEDMYEDRKGQKKVRVRWFHHNQEVKGVIPLRNPHPKEVFITPYAQVISAECVDGPAI 262

Query: 248 VVTREHYDKFLAVLPQDVLDRIHLCFRQFKSNRVKPFKLNKLCGYFDQPIFSYLEHDVL- 72
           V+T EHY+K LA  P   L R+HLCFRQF+S+RVKPF L+KL GYFDQ I S L+ + L 
Sbjct: 263 VLTPEHYEKCLAAFPHAFLSRVHLCFRQFRSHRVKPFDLSKLRGYFDQAILSCLDLNPLQ 322

Query: 71  ------------EDDEFKPQDKVTLGSKRTRSCRG 3
                       ED+E  P D V  G+KRTRSCRG
Sbjct: 323 KPNSDCYGPTAEEDEELSPGDNVKQGAKRTRSCRG 357


>ref|XP_002264338.2| PREDICTED: uncharacterized protein LOC100265203 [Vitis vinifera]
          Length = 688

 Score =  305 bits (780), Expect = 6e-81
 Identities = 147/213 (69%), Positives = 168/213 (78%), Gaps = 13/213 (6%)
 Frame = -3

Query: 602 KGRNSRNLKVHTSGIVWSGEPWACGKQLKHYPAFCRNGTTIAIQSFVFVMAEEENHHLAY 423
           +GR +RNL+ H S IVWSG  W CGKQLKHYP+FCRNGTTI IQSFVFVMA+EE+H+LAY
Sbjct: 125 QGRFARNLEGHDSDIVWSGVAWTCGKQLKHYPSFCRNGTTIVIQSFVFVMAKEEDHYLAY 184

Query: 422 LEDMYEDRKGQKKVKVRWFHHNREVKGVVSIRNSHPKEVFITPYAQVISVECVDGPAIVV 243
           LEDMYEDRKGQKKV+VRWFHHN+EVKGV+ +RN HPKEVFITPYAQVIS ECVDGPAIV+
Sbjct: 185 LEDMYEDRKGQKKVRVRWFHHNQEVKGVIPLRNPHPKEVFITPYAQVISAECVDGPAIVL 244

Query: 242 TREHYDKFLAVLPQDVLDRIHLCFRQFKSNRVKPFKLNKLCGYFDQPIFSYLEHDVL--- 72
           T EHY+K LA  P   L R+HLCFRQF+S+RVKPF L+KL GYFDQ I S L+ + L   
Sbjct: 245 TPEHYEKCLAAFPHAFLSRVHLCFRQFRSHRVKPFDLSKLRGYFDQAILSCLDLNPLQKP 304

Query: 71  ----------EDDEFKPQDKVTLGSKRTRSCRG 3
                     ED+E  P D V  G+KRTRSCRG
Sbjct: 305 NSDCYGPTAEEDEELSPGDNVKQGAKRTRSCRG 337


>ref|XP_002522728.1| DNA binding protein, putative [Ricinus communis]
           gi|223537966|gb|EEF39579.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 683

 Score =  303 bits (775), Expect = 2e-80
 Identities = 146/210 (69%), Positives = 166/210 (79%), Gaps = 13/210 (6%)
 Frame = -3

Query: 602 KGRNSRNLKVHTSGIVWSGEPWACGKQLKHYPAFCRNGTTIAIQSFVFVMAEEENHHLAY 423
           +GR SRNL  H S I+WSG  WACGKQLKHYPAFCRNG TIAIQSFVFVMA+ ENH+LAY
Sbjct: 125 QGRLSRNLSGHNSDIIWSGIAWACGKQLKHYPAFCRNGITIAIQSFVFVMAKGENHYLAY 184

Query: 422 LEDMYEDRKGQKKVKVRWFHHNREVKGVVSIRNSHPKEVFITPYAQVISVECVDGPAIVV 243
           LEDMYED++GQKKVKVRWFHHN+EVKGVV +RN+HP EVFITPY+QVIS ECVDGPAIV+
Sbjct: 185 LEDMYEDKRGQKKVKVRWFHHNQEVKGVVPLRNAHPMEVFITPYSQVISAECVDGPAIVL 244

Query: 242 TREHYDKFLAVLPQDVLDRIHLCFRQFKSNRVKPFKLNKLCGYFDQPIFSYLEHDVL--- 72
           TREHY++ LA  P  +  RIHLCFRQF+SN++KPF L+KL GYFDQPI S L    L   
Sbjct: 245 TREHYEECLAAFPDALSTRIHLCFRQFRSNKIKPFDLSKLRGYFDQPILSCLNSKSLPGV 304

Query: 71  ----------EDDEFKPQDKVTLGSKRTRS 12
                     ED+EF P D V LG+KRTRS
Sbjct: 305 DSISYGLTGEEDEEFSPDDNVKLGAKRTRS 334


>emb|CBI39709.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  284 bits (727), Expect = 9e-75
 Identities = 133/180 (73%), Positives = 151/180 (83%)
 Frame = -3

Query: 614 MPVCKGRNSRNLKVHTSGIVWSGEPWACGKQLKHYPAFCRNGTTIAIQSFVFVMAEEENH 435
           MP   GR +RNL+ H S IVWSG  W CGKQLKHYP+FCRNGTTI IQSFVFVMA+EE+H
Sbjct: 126 MPDYTGRFARNLEGHDSDIVWSGVAWTCGKQLKHYPSFCRNGTTIVIQSFVFVMAKEEDH 185

Query: 434 HLAYLEDMYEDRKGQKKVKVRWFHHNREVKGVVSIRNSHPKEVFITPYAQVISVECVDGP 255
           +LAYLEDMYEDRKGQKKV+VRWFHHN+EVKGV+ +RN HPKEVFITPYAQVIS ECVDGP
Sbjct: 186 YLAYLEDMYEDRKGQKKVRVRWFHHNQEVKGVIPLRNPHPKEVFITPYAQVISAECVDGP 245

Query: 254 AIVVTREHYDKFLAVLPQDVLDRIHLCFRQFKSNRVKPFKLNKLCGYFDQPIFSYLEHDV 75
           AIV+T EHY+K LA  P   L R+HLCFRQF+S+RVKPF L+KL GYFDQ I S+ +  V
Sbjct: 246 AIVLTPEHYEKCLAAFPHAFLSRVHLCFRQFRSHRVKPFDLSKLRGYFDQAILSWRQRFV 305


>ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|222847631|gb|EEE85178.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  279 bits (713), Expect = 4e-73
 Identities = 133/202 (65%), Positives = 155/202 (76%), Gaps = 12/202 (5%)
 Frame = -3

Query: 581 LKVHTSGIVWSGEPWACGKQLKHYPAFCRNGTTIAIQSFVFVMAEEENHHLAYLEDMYED 402
           L +H S IVWSG  W CGKQLKHYPAFCRN TTIAIQSFVFVMA+ +NH+LAYLEDMYED
Sbjct: 115 LVLHVSYIVWSGIAWTCGKQLKHYPAFCRNATTIAIQSFVFVMAKGQNHYLAYLEDMYED 174

Query: 401 RKGQKKVKVRWFHHNREVKGVVSIRNSHPKEVFITPYAQVISVECVDGPAIVVTREHYDK 222
           ++GQKKVKVRWFHH+ EVKGVV +RN+HP+EVFITPY+QVIS ECVDGPAIV+TREHY++
Sbjct: 175 KRGQKKVKVRWFHHSEEVKGVVPLRNAHPQEVFITPYSQVISAECVDGPAIVLTREHYEE 234

Query: 221 FLAVLPQDVLDRIHLCFRQFKSNRVKPFKLNKLCGYFDQPIFSYLEHDVL---------- 72
             A  P  +  RIHLCFRQF+S +VKPF L+KL GYFDQPI S L               
Sbjct: 235 CFAAFPDALSTRIHLCFRQFRSKKVKPFDLSKLRGYFDQPILSCLNSKAFLGAERIACGL 294

Query: 71  --EDDEFKPQDKVTLGSKRTRS 12
             ED+   P + + LG+KRTRS
Sbjct: 295 TEEDEVLNPSENIKLGAKRTRS 316


Top