BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005800
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep...   292   2e-77
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   291   4e-77
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ...   289   1e-76
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su...   289   2e-76
gb|AFK39298.1| unknown [Lotus japonicus]                              288   2e-76

>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223540340|gb|EEF41911.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  292 bits (747), Expect = 2e-77
 Identities = 142/151 (94%), Positives = 148/151 (98%)
 Frame = +2

Query: 50  MFFHIVLERNMQLHPRHFGRDLNQKLVSKLMKDVEGTCSGRHGFIVAITGVESVGKGLIR 229
           MFFHIVLERNMQLHPR+FGR+L + LVSKLMKDVEGTCSGRHGF+VAITG+ESVGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60

Query: 230 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 409
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 410 SGDMPNYTTSDGSVKILKESEVRLKIIGTRV 502
           SGDMPNYTTSDGSVKI K+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449518487|ref|XP_004166273.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 176

 Score =  291 bits (745), Expect = 4e-77
 Identities = 140/151 (92%), Positives = 148/151 (98%)
 Frame = +2

Query: 50  MFFHIVLERNMQLHPRHFGRDLNQKLVSKLMKDVEGTCSGRHGFIVAITGVESVGKGLIR 229
           MFFHIVLERNMQLHPRHFGR+L + LVSKLMKDVEGTCSGRHGF+VAITG+E++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60

Query: 230 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 409
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 410 SGDMPNYTTSDGSVKILKESEVRLKIIGTRV 502
           SGD+PNYTTSDGSVKI K+SEVRLKIIGTRV
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
           gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Glycine max]
           gi|1173137|sp|P46279.1|RPB7_SOYBN RecName:
           Full=DNA-directed RNA polymerase II subunit RPB7;
           Short=RNA polymerase II subunit B7
           gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
           gi|255626843|gb|ACU13766.1| unknown [Glycine max]
          Length = 176

 Score =  289 bits (740), Expect = 1e-76
 Identities = 139/151 (92%), Positives = 147/151 (97%)
 Frame = +2

Query: 50  MFFHIVLERNMQLHPRHFGRDLNQKLVSKLMKDVEGTCSGRHGFIVAITGVESVGKGLIR 229
           MFFHIVLERNMQLHPR+FGR+L   LVSKLMKDVEGTCSGRHGF+VA+TG+E++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 230 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 409
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 410 SGDMPNYTTSDGSVKILKESEVRLKIIGTRV 502
           SGDMPNYTTSDGSVKI K+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147841138|emb|CAN75204.1| hypothetical
           protein VITISV_042914 [Vitis vinifera]
           gi|297745997|emb|CBI16053.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  289 bits (739), Expect = 2e-76
 Identities = 140/151 (92%), Positives = 146/151 (96%)
 Frame = +2

Query: 50  MFFHIVLERNMQLHPRHFGRDLNQKLVSKLMKDVEGTCSGRHGFIVAITGVESVGKGLIR 229
           MFFHIVLERNMQLHPRHFGR L   LV+KL+KDVEGTCSGRHGF+VAITG+E+VGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60

Query: 230 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 409
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 410 SGDMPNYTTSDGSVKILKESEVRLKIIGTRV 502
           SGDMPNYTTSDGSVKI K+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>gb|AFK39298.1| unknown [Lotus japonicus]
          Length = 176

 Score =  288 bits (738), Expect = 2e-76
 Identities = 139/151 (92%), Positives = 147/151 (97%)
 Frame = +2

Query: 50  MFFHIVLERNMQLHPRHFGRDLNQKLVSKLMKDVEGTCSGRHGFIVAITGVESVGKGLIR 229
           MFFHIVLERNMQLHPR+FGR+L   LV+KLMKDVEGTCSGRHGF+VA+TG+E+VGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60

Query: 230 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 409
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 410 SGDMPNYTTSDGSVKILKESEVRLKIIGTRV 502
           SGDMPNYTTSDGSVKI K+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151