BLASTX nr result

ID: Bupleurum21_contig00005799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005799
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]              117   2e-24
ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   115   8e-24
ref|NP_001064568.1| Os10g0407100 [Oryza sativa Japonica Group] g...   113   3e-23
ref|XP_003558726.1| PREDICTED: uncharacterized protein LOC100827...   112   4e-23
ref|NP_001148673.1| ribosomal protein L32 containing protein [Ze...   112   4e-23

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score =  117 bits (292), Expect = 2e-24
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = +3

Query: 60  MELMAVPRTKVSKHKRGIRNGPKALKPIPVIIRCKACGRVKLPHFFCCSGERGNPGEQNG 239
           MELMAVP+ KVS HKRGIRNGPKALKP+PVIIRCKACGRVKLPHFFCCSG + NPGE+N 
Sbjct: 70  MELMAVPKKKVSPHKRGIRNGPKALKPVPVIIRCKACGRVKLPHFFCCSGIKQNPGEENN 129

Query: 240 TT 245
           +T
Sbjct: 130 ST 131


>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  115 bits (287), Expect = 8e-24
 Identities = 50/59 (84%), Positives = 56/59 (94%)
 Frame = +3

Query: 60  MELMAVPRTKVSKHKRGIRNGPKALKPIPVIIRCKACGRVKLPHFFCCSGERGNPGEQN 236
           M+LMAVP+ KVS+HKRGIRNGPKALKP PVIIRC++CGRVKLPHF+CCSGERGN GEQN
Sbjct: 81  MDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSGERGNAGEQN 139


>ref|NP_001064568.1| Os10g0407100 [Oryza sativa Japonica Group]
           gi|15451560|gb|AAK98684.1|AC021893_18 Hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31431998|gb|AAP53697.1| ribosomal protein L32
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113639177|dbj|BAF26482.1| Os10g0407100 [Oryza
           sativa Japonica Group] gi|125574744|gb|EAZ16028.1|
           hypothetical protein OsJ_31473 [Oryza sativa Japonica
           Group] gi|215678578|dbj|BAG92233.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215694917|dbj|BAG90108.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 117

 Score =  113 bits (282), Expect = 3e-23
 Identities = 47/59 (79%), Positives = 56/59 (94%)
 Frame = +3

Query: 60  MELMAVPRTKVSKHKRGIRNGPKALKPIPVIIRCKACGRVKLPHFFCCSGERGNPGEQN 236
           MELMAVP+ KVSK+K+G+RNGPKALKP+PVI+RCK CGRVKLPHF+CCSGERGNPG ++
Sbjct: 58  MELMAVPKKKVSKYKKGLRNGPKALKPVPVIVRCKCCGRVKLPHFYCCSGERGNPGSES 116


>ref|XP_003558726.1| PREDICTED: uncharacterized protein LOC100827106 [Brachypodium
           distachyon]
          Length = 113

 Score =  112 bits (281), Expect = 4e-23
 Identities = 46/59 (77%), Positives = 56/59 (94%)
 Frame = +3

Query: 60  MELMAVPRTKVSKHKRGIRNGPKALKPIPVIIRCKACGRVKLPHFFCCSGERGNPGEQN 236
           MELMAVP+ K+SK+KRG+RNGPKALKP+PVI+RC+ CGRVKLPHF+CCSGERGNPG+ +
Sbjct: 54  MELMAVPKKKISKYKRGLRNGPKALKPVPVIVRCRCCGRVKLPHFYCCSGERGNPGDSS 112


>ref|NP_001148673.1| ribosomal protein L32 containing protein [Zea mays]
           gi|194701752|gb|ACF84960.1| unknown [Zea mays]
           gi|195621276|gb|ACG32468.1| ribosomal protein L32
           containing protein [Zea mays]
           gi|414865034|tpg|DAA43591.1| TPA: Ribosomal protein L32
           containing protein [Zea mays]
          Length = 111

 Score =  112 bits (281), Expect = 4e-23
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = +3

Query: 60  MELMAVPRTKVSKHKRGIRNGPKALKPIPVIIRCKACGRVKLPHFFCCSGERGNPGEQN 236
           MELMAVP+ KVSK+K+G+RNGPKALKP+PVI+RC+ CGRVKLPHF+CCSGERGNP E N
Sbjct: 52  MELMAVPKKKVSKYKKGLRNGPKALKPVPVIVRCRCCGRVKLPHFYCCSGERGNPSESN 110


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