BLASTX nr result

ID: Bupleurum21_contig00005786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005786
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   330   e-116
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   328   e-116
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   328   e-116
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   324   e-114
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   315   e-112

>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223529240|gb|EEF31213.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 603

 Score =  330 bits (847), Expect(2) = e-116
 Identities = 158/206 (76%), Positives = 179/206 (86%), Gaps = 4/206 (1%)
 Frame = -3

Query: 895 KSYHCSSKCFFNAWQHHRVLHERAASAIKDNGNEEEELFGRFNSTGSG----GLAASQSN 728
           KSYHCS+KCF +AWQHHRVLH+RAASA+ +NGN+EEE+FGRFNSTGSG     L++S S 
Sbjct: 89  KSYHCSTKCFSDAWQHHRVLHDRAASAVSENGNDEEEVFGRFNSTGSGVLNTSLSSSAST 148

Query: 727 SSTLNGTAPTNSAAVAQRNGSETWFEVGYAKTYTPTADDIGHVLKFECVVVDAETKSQAG 548
           +S  NG+AP   AAVAQR+G ETWFEVG +KTYTP+ADDIGHVLKFECVVVDAE+K   G
Sbjct: 149 ASLTNGSAPLYPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLPVG 208

Query: 547 PVNTLLTSRVIPAPSPTPRRLISVGGVDVTGHLDLDGRLASSGTFTVLSYNILADAYATN 368
             NT+LTSRVIPAPSPTPRRLI V G+DV GHLD DGR++SSGTFTVLSYNIL+D YAT+
Sbjct: 209 HPNTILTSRVIPAPSPTPRRLIPVSGIDVMGHLDSDGRISSSGTFTVLSYNILSDVYATS 268

Query: 367 ELYSYCPSWALSWPYRRQNLLREIVG 290
           E YSYCPSWALSWPYRRQNLLREIVG
Sbjct: 269 ETYSYCPSWALSWPYRRQNLLREIVG 294



 Score =  116 bits (290), Expect(2) = e-116
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = -2

Query: 191 VQSDHFDEFFAPELDKHGYQALFKRKTAELSSSNGNTIDGCATFFRRDRFSHVKKYEVEF 12
           VQ+DH++EFFAPELDKHGYQAL+KRKT E+ S N  TIDGCATFFRRDRFSHVKKYEVEF
Sbjct: 305 VQNDHYEEFFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVKKYEVEF 364

Query: 11  NKA 3
           NKA
Sbjct: 365 NKA 367


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  328 bits (840), Expect(2) = e-116
 Identities = 158/206 (76%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
 Frame = -3

Query: 895 KSYHCSSKCFFNAWQHHRVLHERAASAIKDNGNEEEELFGRFNSTGSGG----LAASQSN 728
           KSYHCS KCF +AWQHHRVLH+RAASA+ +NGNEEEELFGRFNSTGSG     LA S S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASS 148

Query: 727 SSTLNGTAPTNSAAVAQRNGSETWFEVGYAKTYTPTADDIGHVLKFECVVVDAETKSQAG 548
           +S  NG+AP   AAV QR+G ETWFEVG +KTYTPTADDIGHVLKFECVVVDAETK   G
Sbjct: 149 ASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVG 208

Query: 547 PVNTLLTSRVIPAPSPTPRRLISVGGVDVTGHLDLDGRLASSGTFTVLSYNILADAYATN 368
             + +LTSRVIPAPSPTPR LISV GVD+ GHLD DGR++S+GTFTVLSYNIL+D +AT+
Sbjct: 209 HGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATS 268

Query: 367 ELYSYCPSWALSWPYRRQNLLREIVG 290
           ELYSYCPSWALSWPYR+QNLLREIVG
Sbjct: 269 ELYSYCPSWALSWPYRKQNLLREIVG 294



 Score =  116 bits (291), Expect(2) = e-116
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 VQSDHFDEFFAPELDKHGYQALFKRKTAELSSSNGNTIDGCATFFRRDRFSHVKKYEVEF 12
           +QSDHF+EFFAPELDKHGYQAL+KRKT E+ + N +TIDGCATFFRRDRFSHVKKYEVEF
Sbjct: 305 IQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEF 364

Query: 11  NKA 3
           NKA
Sbjct: 365 NKA 367


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  328 bits (840), Expect(2) = e-116
 Identities = 158/206 (76%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
 Frame = -3

Query: 895 KSYHCSSKCFFNAWQHHRVLHERAASAIKDNGNEEEELFGRFNSTGSGG----LAASQSN 728
           KSYHCS KCF +AWQHHRVLH+RAASA+ +NGNEEEELFGRFNSTGSG     LA S S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASS 148

Query: 727 SSTLNGTAPTNSAAVAQRNGSETWFEVGYAKTYTPTADDIGHVLKFECVVVDAETKSQAG 548
           +S  NG+AP   AAV QR+G ETWFEVG +KTYTPTADDIGHVLKFECVVVDAETK   G
Sbjct: 149 ASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVG 208

Query: 547 PVNTLLTSRVIPAPSPTPRRLISVGGVDVTGHLDLDGRLASSGTFTVLSYNILADAYATN 368
             + +LTSRVIPAPSPTPR LISV GVD+ GHLD DGR++S+GTFTVLSYNIL+D +AT+
Sbjct: 209 HGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATS 268

Query: 367 ELYSYCPSWALSWPYRRQNLLREIVG 290
           ELYSYCPSWALSWPYR+QNLLREIVG
Sbjct: 269 ELYSYCPSWALSWPYRKQNLLREIVG 294



 Score =  116 bits (291), Expect(2) = e-116
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 VQSDHFDEFFAPELDKHGYQALFKRKTAELSSSNGNTIDGCATFFRRDRFSHVKKYEVEF 12
           +QSDHF+EFFAPELDKHGYQAL+KRKT E+ + N +TIDGCATFFRRDRFSHVKKYEVEF
Sbjct: 305 IQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEF 364

Query: 11  NKA 3
           NKA
Sbjct: 365 NKA 367


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  324 bits (831), Expect(2) = e-114
 Identities = 158/206 (76%), Positives = 174/206 (84%), Gaps = 4/206 (1%)
 Frame = -3

Query: 895 KSYHCSSKCFFNAWQHHRVLHERAASAIKDNGNEEEELFGRFNSTGSG----GLAASQSN 728
           KSYHCS KCF +AWQHHRVLH+RAASAI +NGNEEEELFGRFNS+GSG     L+ S S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAINENGNEEEELFGRFNSSGSGVMNTSLSGSASS 148

Query: 727 SSTLNGTAPTNSAAVAQRNGSETWFEVGYAKTYTPTADDIGHVLKFECVVVDAETKSQAG 548
           +S  NG+ P   AAV QR+G ETWFEVG +KTYTP+ADDIGHVLKFECVVVDAETK   G
Sbjct: 149 ASLTNGSTPLYPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVG 208

Query: 547 PVNTLLTSRVIPAPSPTPRRLISVGGVDVTGHLDLDGRLASSGTFTVLSYNILADAYATN 368
             NTLLTSRVIPAPSPTPRRLISV G+D    LD DGR++SSGTFTVLSYNIL+D YATN
Sbjct: 209 HSNTLLTSRVIPAPSPTPRRLISVSGLDAMAPLDSDGRISSSGTFTVLSYNILSDVYATN 268

Query: 367 ELYSYCPSWALSWPYRRQNLLREIVG 290
           + YSYCPSWALSWPYRRQNLLREIVG
Sbjct: 269 DTYSYCPSWALSWPYRRQNLLREIVG 294



 Score =  115 bits (289), Expect(2) = e-114
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 VQSDHFDEFFAPELDKHGYQALFKRKTAELSSSNGNTIDGCATFFRRDRFSHVKKYEVEF 12
           VQSDH++EFFAPELDKHGYQAL+KRKT E+ + N +TIDGCATFFRRDRFSHVKKYEVEF
Sbjct: 305 VQSDHYEEFFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVKKYEVEF 364

Query: 11  NKA 3
           NKA
Sbjct: 365 NKA 367


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  315 bits (807), Expect(2) = e-112
 Identities = 155/206 (75%), Positives = 173/206 (83%), Gaps = 4/206 (1%)
 Frame = -3

Query: 895 KSYHCSSKCFFNAWQHHRVLHERAASAIKDNGNEEEELFGRFNSTGSG----GLAASQSN 728
           KSYHCS KCF +AWQHHRVLH+RAASA+ +NGNEEEELFGR+NS+GSG     L+ S S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRYNSSGSGVLNTSLSGSASS 148

Query: 727 SSTLNGTAPTNSAAVAQRNGSETWFEVGYAKTYTPTADDIGHVLKFECVVVDAETKSQAG 548
           +S  NG+ P   AAV QR+G ETWFEVG +K YTP+ADDIGHVLKFECVVVDAETK   G
Sbjct: 149 ASLTNGSTPLYPAAVTQRSG-ETWFEVGRSKIYTPSADDIGHVLKFECVVVDAETKLPVG 207

Query: 547 PVNTLLTSRVIPAPSPTPRRLISVGGVDVTGHLDLDGRLASSGTFTVLSYNILADAYATN 368
             NTLLTSRVIPAPSPTPRRLI V G+D    LDLDGR++S+GTFTVLSYNIL+D YATN
Sbjct: 208 HPNTLLTSRVIPAPSPTPRRLIPVSGLDAMVPLDLDGRISSTGTFTVLSYNILSDVYATN 267

Query: 367 ELYSYCPSWALSWPYRRQNLLREIVG 290
           E YSYCPSWALSWPYRRQNLLREIVG
Sbjct: 268 ETYSYCPSWALSWPYRRQNLLREIVG 293



 Score =  116 bits (291), Expect(2) = e-112
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 VQSDHFDEFFAPELDKHGYQALFKRKTAELSSSNGNTIDGCATFFRRDRFSHVKKYEVEF 12
           VQSDH++EFFAPELDKHGYQAL+KRKT E+ + N +TIDGCATFFRRDRFSHVKKYEVEF
Sbjct: 304 VQSDHYEEFFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKKYEVEF 363

Query: 11  NKA 3
           NKA
Sbjct: 364 NKA 366


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